RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 FAM184BQ9ULE4 1060 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 CCDC50Q8IVM0 306 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 BPIFA3Q9BQP9 254 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 ZBTB16Q05516 673 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 FMR1Q06787 632 aaKnown RBP eCLIP13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 RAD9BQ6WBX8 426 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 SV2BQ7L1I2 683 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 CRNKL1Q9BZJ0 848 aaKnown RBP13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 NFU1Q9UMS0 254 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 PDE6AP16499 860 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 ST3GAL1Q11201 340 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 ZSCAN29Q8IWY8 852 aaPredicted RBP13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 ENGASEQ8NFI3 743 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 RASAL2Q9UJF2 1139 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 A0A0G2JLW4 131 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 GJC1P36383 396 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 EPHB4P54760 987 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 METTL16Q86W50 562 aaKnown RBP13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 ANKRD42Q8N9B4 389 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 LMBR1Q8WVP7 490 aa13.9□□□□□ -0.18
SSX2IP-201ENST00000342203 CALM1P0DP23 149 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 CALM2P0DP24 149 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 CALM3P0DP25 149 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 SH2D3CQ8N5H7 860 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 SDR42E1Q8WUS8 393 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 PNKPQ96T60 521 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 TRIM10Q9UDY6 481 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 GDAQ9Y2T3 454 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 TFRCP02786 760 aaKnown RBP13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 FOXR1Q6PIV2 292 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 IFNL3Q8IZI9 196 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 TC2NQ8N9U0 490 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 SLC39A2Q9NP94 309 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 MTRF1LQ9UGC7 380 aaKnown RBP13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 BACH1O14867 736 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 NR1D1P20393 614 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 RESP18Q5W5W9 173 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 ARHGEF25Q86VW2 580 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 VSIG1Q86XK7 387 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 FTCDO95954 541 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 GNAT2P19087 354 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 FAM47AQ5JRC9 791 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 PRM3Q9NNZ6 103 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 UTP11Q9Y3A2 253 aaKnown RBP13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 GTPBP6O43824 516 aaPredicted RBP13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 SWAP70Q9UH65 585 aa13.89□□□□□ -0.19
SSX2IP-201ENST00000342203 ATP11AP98196 1134 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 INTS8Q75QN2 995 aaKnown RBP13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 PEX26Q7Z412 305 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 CHP1Q99653 195 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 SLC52A2Q9HAB3 445 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 CCNT1O60563 726 aaKnown RBP13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 IGKV5-2P06315 115 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 PPARAQ07869 468 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 CCDC84Q86UT8 332 aaPredicted RBP13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 COG1Q8WTW3 980 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 ABHD10Q9NUJ1 306 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 RASGRP4Q8TDF6 673 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 CXorf56Q9H5V9 222 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 CEP83Q9Y592 693 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 EIF4E1BA6NMX2 242 aaKnown RBP13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 ATP1A1P05023 1023 aaKnown RBP13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 CNNM4Q6P4Q7 775 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 TFR2Q9UP52 801 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 CLTCL1P53675 1640 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 MADDQ8WXG6 1647 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 TNKSO95271 1327 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 SYCP3Q8IZU3 236 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 CCDC63Q8NA47 563 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 PAGE5Q96GU1 130 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 MMS19Q96T76 1030 aa13.88□□□□□ -0.19
SSX2IP-201ENST00000342203 METP08581 1390 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 SFMBT2Q5VUG0 894 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 CNOT6LQ96LI5 555 aaKnown RBP13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 CD2APQ9Y5K6 639 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 TRIM49BA6NDI0 452 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 CHUKO15111 745 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 ZNF185O15231 689 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 CTDNEP1O95476 244 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 GUCY2CP25092 1073 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 FXR1P51114 621 aaKnown RBP eCLIP13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 USP14P54578 494 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 CALCOCO2Q13137 446 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 ASIC2Q16515 512 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 DCAF5Q96JK2 942 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 ZSWIM5Q9P217 1185 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 CCDC160A6NGH7 325 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 KRIT1O00522 736 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 KCNJ6P48051 423 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 SETDB1Q15047 1291 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 CABP7Q86V35 215 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 IFT74Q96LB3 600 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 NHEJ1Q9H9Q4 299 aaPredicted RBP13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 ZNF287Q9HBT7 754 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 ANKIB1Q9P2G1 1089 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 MMP1P03956 469 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 INF2Q27J81 1249 aa13.87□□□□□ -0.19
SSX2IP-201ENST00000342203 SPATS2Q86XZ4 545 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms