RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 E2F4Q16254 413 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 CAVIN4Q5BKX8 364 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 RASGRP2Q7LDG7 609 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 CTCFLQ8NI51 663 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-202ENST00000342084 NSUN4Q96CB9 384 aaKnown RBP8.25□□□□□ -1.09
PTPRR-202ENST00000342084 MTA3Q9BTC8 594 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 BRIP1Q9BX63 1249 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 RBM28Q9NW13 759 aaKnown RBP8.25□□□□□ -1.09
PTPRR-202ENST00000342084 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.25□□□□□ -1.09
PTPRR-202ENST00000342084 ADGRG1Q9Y653 693 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 LTBP4Q8N2S1 1624 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 TRIM49BA6NDI0 452 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 TBC1D8O95759 1140 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 USP17L8P0C7I0 530 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 SCG2P13521 617 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 GTF2E1P29083 439 aaPredicted RBP8.24□□□□□ -1.09
PTPRR-202ENST00000342084 ERVK-24P63145 666 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 TBC1D9BQ66K14 1250 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 PDXDC2PQ6P474 469 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 RSRC2Q7L4I2 434 aaKnown RBP8.24□□□□□ -1.09
PTPRR-202ENST00000342084 PTF1AQ7RTS3 328 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 TXNRD3Q86VQ6 643 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 STAG2Q8N3U4 1231 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 LINC00116Q8NCU8 138 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 FERMT2Q96AC1 680 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 DYNLL2Q96FJ2 89 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 PANX2Q96RD6 677 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 NOL10Q9BSC4 688 aaKnown RBP8.24□□□□□ -1.09
PTPRR-202ENST00000342084 BRMS1Q9HCU9 246 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 ZCCHC17Q9NP64 241 aaKnown RBP8.24□□□□□ -1.09
PTPRR-202ENST00000342084 DCP1AQ9NPI6 582 aaPredicted RBP8.24□□□□□ -1.09
PTPRR-202ENST00000342084 ARGLU1Q9NWB6 273 aaPredicted RBP8.24□□□□□ -1.09
PTPRR-202ENST00000342084 SRP68Q9UHB9 627 aaKnown RBP8.24□□□□□ -1.09
PTPRR-202ENST00000342084 CASZ1Q86V15 1759 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 GOLGA6L9A6NEM1 432 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 TSPY2A6NKD2 308 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 DDAH1O94760 285 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 UBE4AQ14139 1066 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 ZNF569Q5MCW4 686 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 TYW1BQ6NUM6 668 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 CC2D1AQ6P1N0 951 aaPredicted RBP8.24□□□□□ -1.09
PTPRR-202ENST00000342084 NELFBQ8WX92 580 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 EEF2KMTQ96G04 330 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 SRRTQ9BXP5 876 aaKnown RBP8.24□□□□□ -1.09
PTPRR-202ENST00000342084 PARD6BQ9BYG5 372 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 TFR2Q9UP52 801 aa8.24□□□□□ -1.09
PTPRR-202ENST00000342084 DLEC1Q9Y238 1755 aa8.23□□□□□ -1.09
PTPRR-202ENST00000342084 NUTM2BA6NNL0 878 aaPredicted RBP8.23□□□□□ -1.09
PTPRR-202ENST00000342084 NUTM2EB1AL46 878 aaPredicted RBP8.23□□□□□ -1.09
PTPRR-202ENST00000342084 N4BP3O15049 544 aa8.23□□□□□ -1.09
PTPRR-202ENST00000342084 COPB1P53618 953 aaKnown RBP8.23□□□□□ -1.09
PTPRR-202ENST00000342084 GYS2P54840 703 aa8.23□□□□□ -1.09
PTPRR-202ENST00000342084 GRIK5Q16478 980 aa8.23□□□□□ -1.09
PTPRR-202ENST00000342084 SLC35G1Q2M3R5 365 aa8.23□□□□□ -1.09
PTPRR-202ENST00000342084 RCSD1Q6JBY9 416 aa8.23□□□□□ -1.09
PTPRR-202ENST00000342084 SLC35F6Q8N357 371 aa8.23□□□□□ -1.09
PTPRR-202ENST00000342084 LRRC15Q8TF66 581 aa8.23□□□□□ -1.09
PTPRR-202ENST00000342084 GPR101Q96P66 508 aaPredicted RBP8.23□□□□□ -1.09
PTPRR-202ENST00000342084 GSDMAQ96QA5 445 aa8.23□□□□□ -1.09
PTPRR-202ENST00000342084 CPVLQ9H3G5 476 aa8.23□□□□□ -1.09
PTPRR-202ENST00000342084 BSDC1Q9NW68 430 aaPredicted RBP8.23□□□□□ -1.09
PTPRR-202ENST00000342084 MCM9Q9NXL9 1143 aa8.23□□□□□ -1.09
PTPRR-202ENST00000342084 TRIM10Q9UDY6 481 aa8.23□□□□□ -1.09
PTPRR-202ENST00000342084 SPATA31A1Q5TZJ5 1347 aa8.23□□□□□ -1.09
PTPRR-202ENST00000342084 USP17L3A6NCW0 530 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 USP17L4A6NCW7 530 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 KCNJ18B7U540 433 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 PES1O00541 588 aaKnown RBP8.22□□□□□ -1.09
PTPRR-202ENST00000342084 RPN1P04843 607 aaKnown RBP8.22□□□□□ -1.09
PTPRR-202ENST00000342084 FGRP09769 529 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 CALM1P0DP23 149 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 CALM2P0DP24 149 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 CALM3P0DP25 149 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 OAS2P29728 719 aaKnown RBP8.22□□□□□ -1.09
PTPRR-202ENST00000342084 PMS1P54277 932 aaKnown RBP8.22□□□□□ -1.09
PTPRR-202ENST00000342084 KCNJ12Q14500 433 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 PPP2R5BQ15173 497 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 PFKFB3Q16875 520 aaPredicted RBP8.22□□□□□ -1.09
PTPRR-202ENST00000342084 FILIP1LQ4L180 1135 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 USP17L1Q7RTZ2 530 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 FBXO33Q7Z6M2 555 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 IQUBQ8NA54 791 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 SLC44A5Q8NCS7 719 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 GOLGA1Q92805 767 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 NUP88Q99567 741 aaPredicted RBP8.22□□□□□ -1.09
PTPRR-202ENST00000342084 CHP1Q99653 195 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 SLF1Q9BQI6 1058 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 CRNKL1Q9BZJ0 848 aaKnown RBP8.22□□□□□ -1.09
PTPRR-202ENST00000342084 TMEM60Q9H2L4 133 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 ABHD10Q9NUJ1 306 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 ZNF652Q9Y2D9 606 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 GTPBP6O43824 516 aaPredicted RBP8.22□□□□□ -1.09
PTPRR-202ENST00000342084 ORC4O43929 436 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 KIF5CO60282 957 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 STAT6P42226 847 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 PRCPP42785 496 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 ST5P78524 1137 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 TFAP4Q01664 338 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 PAK1Q13153 545 aa8.22□□□□□ -1.09
PTPRR-202ENST00000342084 SF3B3Q15393 1217 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms