RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 OTUD5Q96G74 571 aa12.3□□□□□ -0.44
TPM3-207ENST00000341372 TMEM134Q9H6X4 195 aa12.3□□□□□ -0.44
TPM3-207ENST00000341372 PPP4R2Q9NY27 417 aa12.3□□□□□ -0.44
TPM3-207ENST00000341372 GTF2A2P52657 109 aa12.29□□□□□ -0.44
TPM3-207ENST00000341372 NR1H3Q13133 447 aa12.29□□□□□ -0.44
TPM3-207ENST00000341372 SDR42E1Q8WUS8 393 aa12.29□□□□□ -0.44
TPM3-207ENST00000341372 TINF2Q9BSI4 451 aa12.29□□□□□ -0.44
TPM3-207ENST00000341372 ATP8A2Q9NTI2 1148 aa12.29□□□□□ -0.44
TPM3-207ENST00000341372 EGFL7Q9UHF1 273 aa12.29□□□□□ -0.44
TPM3-207ENST00000341372 SAP30BPQ9UHR5 308 aaKnown RBP12.29□□□□□ -0.44
TPM3-207ENST00000341372 IGF2BP3O00425 579 aaKnown RBP eCLIP12.28□□□□□ -0.441e-7■■■■□ 23.3
TPM3-207ENST00000341372 PTPRAP18433 802 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 GABPAQ06546 454 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 NCOA4Q13772 614 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 RRP1BQ14684 758 aaKnown RBP12.28□□□□□ -0.44
TPM3-207ENST00000341372 ZMYM1Q5SVZ6 1142 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 TTC6Q86TZ1 520 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 STRBPQ96SI9 672 aaKnown RBP12.28□□□□□ -0.44
TPM3-207ENST00000341372 FSD1Q9BTV5 496 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 GINM1Q9NU53 330 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 LOC285556D6RIA3 1793 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 PRKAB2O43741 272 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 ICMTO60725 284 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 ALDH1A1P00352 501 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 DNAJB2P25686 324 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 CAP2P40123 477 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 LBX1P52954 281 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 USP46P62068 366 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 SNAPC2Q13487 334 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 TATDN1Q6P1N9 297 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 BRI3BPQ8WY22 251 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 PTPN18Q99952 460 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 SERPINB13Q9UIV8 391 aa12.28□□□□□ -0.44
TPM3-207ENST00000341372 TMA7Q9Y2S6 64 aaKnown RBP12.28□□□□□ -0.44
TPM3-207ENST00000341372 MYH8P13535 1937 aa12.27□□□□□ -0.44
TPM3-207ENST00000341372 DPYDQ12882 1025 aa12.27□□□□□ -0.44
TPM3-207ENST00000341372 SWI5Q1ZZU3 235 aa12.27□□□□□ -0.44
TPM3-207ENST00000341372 ZCCHC17Q9NP64 241 aaKnown RBP12.27□□□□□ -0.44
TPM3-207ENST00000341372 PICK1Q9NRD5 415 aa12.27□□□□□ -0.44
TPM3-207ENST00000341372 MCM9Q9NXL9 1143 aa12.27□□□□□ -0.44
TPM3-207ENST00000341372 CCL15-CCL14A0A0B4J2E2 113 aa12.27□□□□□ -0.45
TPM3-207ENST00000341372 M0R2C6 588 aa12.27□□□□□ -0.45
TPM3-207ENST00000341372 CXCL11O14625 94 aa12.27□□□□□ -0.45
TPM3-207ENST00000341372 GPAA1O43292 621 aa12.27□□□□□ -0.45
TPM3-207ENST00000341372 TRPA1O75762 1119 aa12.27□□□□□ -0.45
TPM3-207ENST00000341372 CETPP11597 493 aa12.27□□□□□ -0.45
TPM3-207ENST00000341372 PLCD1P51178 756 aa12.27□□□□□ -0.45
TPM3-207ENST00000341372 MOGSQ13724 837 aa12.27□□□□□ -0.45
TPM3-207ENST00000341372 CCL15Q16663 113 aa12.27□□□□□ -0.45
TPM3-207ENST00000341372 GLYCTKQ8IVS8 523 aa12.27□□□□□ -0.45
TPM3-207ENST00000341372 CRACR2BQ8N4Y2 399 aaPredicted RBP12.27□□□□□ -0.45
TPM3-207ENST00000341372 DCTN4Q9UJW0 460 aa12.27□□□□□ -0.45
TPM3-207ENST00000341372 AFG3L2Q9Y4W6 797 aa12.27□□□□□ -0.45
TPM3-207ENST00000341372 SLC4A4Q9Y6R1 1079 aa12.27□□□□□ -0.45
TPM3-207ENST00000341372 GSG1L2A8MUP6 293 aa12.26□□□□□ -0.45
TPM3-207ENST00000341372 LZTS3O60299 673 aaPredicted RBP12.26□□□□□ -0.45
TPM3-207ENST00000341372 GNAT2P19087 354 aa12.26□□□□□ -0.45
TPM3-207ENST00000341372 CUEDC1Q9NWM3 386 aaPredicted RBP12.26□□□□□ -0.45
TPM3-207ENST00000341372 TSKSQ9UJT2 592 aa12.26□□□□□ -0.45
TPM3-207ENST00000341372 CASP8AP2Q9UKL3 1982 aa12.26□□□□□ -0.45
TPM3-207ENST00000341372 ROBO3Q96MS0 1386 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 A0A0G2JLL6 359 aaPredicted RBP12.25□□□□□ -0.45
TPM3-207ENST00000341372 TLDC2A0PJX2 215 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 POLR3DP05423 398 aaPredicted RBP12.25□□□□□ -0.45
TPM3-207ENST00000341372 SHMT1P34896 483 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 GCGRP47871 477 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 SLC4A8Q2Y0W8 1093 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 CCDC144BQ3MJ40 725 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 C12orf60Q5U649 245 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 OTUD7BQ6GQQ9 843 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 PRRT2Q7Z6L0 340 aaPredicted RBP12.25□□□□□ -0.45
TPM3-207ENST00000341372 NT5DC4Q86YG4 428 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 UBE2Q2Q8WVN8 375 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 EPB41L4AQ9HCS5 686 aaPredicted RBP12.25□□□□□ -0.45
TPM3-207ENST00000341372 PRKAG2Q9UGJ0 569 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 ZHX2Q9Y6X8 837 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 PRMT3O60678 531 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 ASNSP08243 561 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 JAG1P78504 1218 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 EVX2Q03828 476 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 SBK1Q52WX2 424 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 NUDT18Q6ZVK8 323 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 SEC62Q99442 399 aaKnown RBP12.25□□□□□ -0.45
TPM3-207ENST00000341372 ADAM33Q9BZ11 813 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.25□□□□□ -0.45
TPM3-207ENST00000341372 ARPP21Q9UBL0 812 aaPredicted RBP12.25□□□□□ -0.45
TPM3-207ENST00000341372 SWAP70Q9UH65 585 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 ZBTB21Q9ULJ3 1066 aa12.25□□□□□ -0.45
TPM3-207ENST00000341372 GREB1LQ9C091 1923 aaPredicted RBP12.24□□□□□ -0.45
TPM3-207ENST00000341372 CYP2D6P10635 497 aa12.24□□□□□ -0.45
TPM3-207ENST00000341372 COL13A1Q5TAT6 717 aaPredicted RBP12.24□□□□□ -0.45
TPM3-207ENST00000341372 CTR9Q6PD62 1173 aa12.24□□□□□ -0.45
TPM3-207ENST00000341372 ANKRD23Q86SG2 305 aa12.24□□□□□ -0.45
TPM3-207ENST00000341372 FAM43AQ8N2R8 423 aa12.24□□□□□ -0.45
TPM3-207ENST00000341372 WDR18Q9BV38 432 aa12.24□□□□□ -0.45
TPM3-207ENST00000341372 HELLSQ9NRZ9 838 aa12.24□□□□□ -0.45
TPM3-207ENST00000341372 BTBD19C9JJ37 291 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 GDF11O95390 407 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 KCNH2Q12809 1159 aa12.23□□□□□ -0.45
TPM3-207ENST00000341372 SHROOM1Q2M3G4 852 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms