RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 RPS6KC1Q96S38 1066 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 IMPACTQ9P2X3 320 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 KCNG1Q9UIX4 513 aa15.2■□□□□ 0.02
PDE4D-203ENST00000340635 LMNAP02545 664 aaKnown RBP15.19■□□□□ 0.02
PDE4D-203ENST00000340635 MAGEA1P43355 309 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 ELF2Q15723 593 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 TPTE2Q6XPS3 522 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 MYRIPQ8NFW9 859 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 LRMPQ12912 555 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 ANGPTL8Q6UXH0 198 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 MIS12Q9H081 205 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 A6NJR5 290 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 ZYXQ15942 572 aaKnown RBP15.19■□□□□ 0.02
PDE4D-203ENST00000340635 USH1GQ495M9 461 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 GLE1Q53GS7 698 aaKnown RBP15.19■□□□□ 0.02
PDE4D-203ENST00000340635 HOOK2Q96ED9 719 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 KRIT1O00522 736 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 SLC9A5Q14940 896 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 BBS5Q8N3I7 341 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 SLC5A4Q9NY91 659 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 IFNA8P32881 189 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 TEX11Q8IYF3 940 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 POLKQ9UBT6 870 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 EIF6P56537 245 aaKnown RBP15.19■□□□□ 0.02
PDE4D-203ENST00000340635 TYW1BQ6NUM6 668 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 RBM17Q96I25 401 aaKnown RBP15.19■□□□□ 0.02
PDE4D-203ENST00000340635 CHPF2Q9P2E5 772 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 GRM8O00222 908 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 TNNC2P02585 160 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 PPP2R5EQ16537 467 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 ARMC9Q7Z3E5 817 aa15.19■□□□□ 0.02
PDE4D-203ENST00000340635 ERICH3Q5RHP9 1530 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 GOLGA8KD6RF30 607 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 GNA14O95837 355 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 KIF22Q14807 665 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 TAF11Q15544 211 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 TXLNGQ9NUQ3 528 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 LRRC23Q53EV4 343 aaPredicted RBP15.18■□□□□ 0.02
PDE4D-203ENST00000340635 KAZNQ674X7 775 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 SCYL3Q8IZE3 742 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.18■□□□□ 0.02
PDE4D-203ENST00000340635 FAM170AA1A519 330 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 INHBAP08476 426 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 NBPF14Q5TI25 921 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 ABCF3Q9NUQ8 709 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 TFCP2L1Q9NZI6 479 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 SYNJ2BP-COX16A0A087WUM0 186 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 ATF2P15336 505 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 SMC5Q8IY18 1101 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 KIFC3Q9BVG8 833 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 COX16Q9P0S2 106 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 SYNJ2O15056 1496 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 FOXO3O43524 673 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 DHX32Q7L7V1 743 aaKnown RBP15.18■□□□□ 0.02
PDE4D-203ENST00000340635 TRIM42Q8IWZ5 723 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 CDC26Q8NHZ8 85 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 DEPTORQ8TB45 409 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 SNX29Q8TEQ0 813 aa15.18■□□□□ 0.02
PDE4D-203ENST00000340635 DEXIO95424 95 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 GNGT1P63211 74 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 FBXO41Q8TF61 875 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.17■□□□□ 0.02
PDE4D-203ENST00000340635 KCNH3Q9ULD8 1083 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 SLC4A1P02730 911 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 C20orf194Q5TEA3 1177 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 TTBK2Q6IQ55 1244 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 ABCB4P21439 1286 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 C9orf84Q5VXU9 1444 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 WBP4O75554 376 aaKnown RBP15.17■□□□□ 0.02
PDE4D-203ENST00000340635 PDE1BQ01064 536 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 TCIRG1Q13488 830 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 TMEM259Q4ZIN3 620 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 RNF207Q6ZRF8 634 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 GPIHBP1Q8IV16 184 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 TPCN1Q9ULQ1 816 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 RTCBQ9Y3I0 505 aaKnown RBP15.17■□□□□ 0.02
PDE4D-203ENST00000340635 FAM135AQ9P2D6 1515 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 NELFBQ8WX92 580 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 GLG1Q92896 1179 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 KIAA1107Q9UPP5 1409 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.17■□□□□ 0.02
PDE4D-203ENST00000340635 KCNA4P22459 653 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 CREB3L3Q68CJ9 461 aa15.17■□□□□ 0.02
PDE4D-203ENST00000340635 SMCR8Q8TEV9 937 aaPredicted RBP15.17■□□□□ 0.02
PDE4D-203ENST00000340635 U2AF1L4Q8WU68 220 aaKnown RBP15.17■□□□□ 0.02
PDE4D-203ENST00000340635 SZRD1Q7Z422 152 aa15.16■□□□□ 0.02
PDE4D-203ENST00000340635 KCNK3O14649 394 aa15.16■□□□□ 0.02
PDE4D-203ENST00000340635 PDE6CP51160 858 aa15.16■□□□□ 0.02
PDE4D-203ENST00000340635 DAB2P98082 770 aa15.16■□□□□ 0.02
PDE4D-203ENST00000340635 TRIML1Q8N9V2 468 aa15.16■□□□□ 0.02
PDE4D-203ENST00000340635 NFKBIL1Q9UBC1 381 aaPredicted RBP15.16■□□□□ 0.02
PDE4D-203ENST00000340635 ATP1A2P50993 1020 aa15.16■□□□□ 0.02
PDE4D-203ENST00000340635 ATG16L1Q676U5 607 aa15.16■□□□□ 0.02
PDE4D-203ENST00000340635 RRAGAQ7L523 313 aa15.16■□□□□ 0.02
PDE4D-203ENST00000340635 TTC30BQ8N4P2 665 aa15.16■□□□□ 0.02
PDE4D-203ENST00000340635 LSM14BQ9BX40 385 aaKnown RBP15.16■□□□□ 0.02
PDE4D-203ENST00000340635 HESX1Q9UBX0 185 aa15.16■□□□□ 0.02
PDE4D-203ENST00000340635 CAPN11Q9UMQ6 739 aa15.16■□□□□ 0.02
PDE4D-203ENST00000340635 AK2P54819 239 aa15.16■□□□□ 0.02
PDE4D-203ENST00000340635 SKOR1P84550 965 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms