RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 FAM227BQ96M60 508 aa15.84■□□□□ 0.13
SIRPB3P-201ENST00000340424 APBA2Q99767 749 aa15.84■□□□□ 0.13
SIRPB3P-201ENST00000340424 MTMR4Q9NYA4 1195 aa15.84■□□□□ 0.13
SIRPB3P-201ENST00000340424 BTBD7Q9P203 1132 aa15.84■□□□□ 0.13
SIRPB3P-201ENST00000340424 CCDC171Q6TFL3 1326 aa15.84■□□□□ 0.13
SIRPB3P-201ENST00000340424 PLXNB2O15031 1838 aa15.84■□□□□ 0.13
SIRPB3P-201ENST00000340424 PDE4DIPQ5VU43 2346 aa15.83■□□□□ 0.12
SIRPB3P-201ENST00000340424 SLC15A5A6NIM6 579 aa15.83■□□□□ 0.12
SIRPB3P-201ENST00000340424 FOXP2O15409 715 aa15.83■□□□□ 0.12
SIRPB3P-201ENST00000340424 STRNO43815 780 aa15.83■□□□□ 0.12
SIRPB3P-201ENST00000340424 PRDM1O75626 825 aa15.83■□□□□ 0.12
SIRPB3P-201ENST00000340424 PCP11498 1178 aaKnown RBP15.83■□□□□ 0.12
SIRPB3P-201ENST00000340424 SDSP20132 328 aa15.83■□□□□ 0.12
SIRPB3P-201ENST00000340424 NMIQ13287 307 aaPredicted RBP15.83■□□□□ 0.12
SIRPB3P-201ENST00000340424 STK11IPQ8N1F8 1099 aa15.83■□□□□ 0.12
SIRPB3P-201ENST00000340424 SPATC1LQ9H0A9 340 aa15.83■□□□□ 0.12
SIRPB3P-201ENST00000340424 MROH8Q9H579 483 aa15.83■□□□□ 0.12
SIRPB3P-201ENST00000340424 PAK6Q9NQU5 681 aaPredicted RBP15.83■□□□□ 0.12
SIRPB3P-201ENST00000340424 PARP14Q460N5 1801 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 PEX10O60683 326 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 HSPD1P10809 573 aaKnown RBP15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 ZKSCAN1P17029 563 aaPredicted RBP15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 CYP2B6P20813 491 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 PTPREP23469 700 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 COPB2P35606 906 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 NT5C2P49902 561 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 MAP2K5Q13163 448 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 GRB14Q14449 540 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 VPS53Q5VIR6 699 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 GMCL1P1Q8NEA9 526 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 U2AF1L4Q8WU68 220 aaKnown RBP15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 CEP95Q96GE4 821 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 UNC93B1Q9H1C4 597 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 DIAPH3Q9NSV4 1193 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 CLIP2Q9UDT6 1046 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 PPP1R9AQ9ULJ8 1098 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 ADAMTS5Q9UNA0 930 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 RPTORQ8N122 1335 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 ZNF236Q9UL36 1845 aa15.82■□□□□ 0.12
SIRPB3P-201ENST00000340424 F5H6K3 240 aa15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 ORC4O43929 436 aa15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 RAD21O60216 631 aa15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 SGPL1O95470 568 aa15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 SLC25A27O95847 323 aa15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 HOXC6P09630 235 aa15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 FGRP09769 529 aa15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 TFAP4Q01664 338 aa15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 KLRC3Q07444 240 aa15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 WDR78Q5VTH9 848 aa15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 PRPF38BQ5VTL8 546 aaKnown RBP15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 ABRAQ8N0Z2 381 aa15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 ATG4CQ96DT6 458 aa15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 MOV10L1Q9BXT6 1211 aaKnown RBP15.81■□□□□ 0.12
SIRPB3P-201ENST00000340424 MYH4Q9Y623 1939 aa15.8■□□□□ 0.12
SIRPB3P-201ENST00000340424 TSPY2A6NKD2 308 aa15.8■□□□□ 0.12
SIRPB3P-201ENST00000340424 NDUFB10O96000 172 aa15.8■□□□□ 0.12
SIRPB3P-201ENST00000340424 FGAP02671 866 aa15.8■□□□□ 0.12
SIRPB3P-201ENST00000340424 IRX6P78412 446 aaPredicted RBP15.8■□□□□ 0.12
SIRPB3P-201ENST00000340424 FAM83BQ5T0W9 1011 aa15.8■□□□□ 0.12
SIRPB3P-201ENST00000340424 MAP3K21Q5TCX8 1036 aa15.8■□□□□ 0.12
SIRPB3P-201ENST00000340424 TRIB2Q92519 343 aa15.8■□□□□ 0.12
SIRPB3P-201ENST00000340424 SHISA4Q96DD7 197 aa15.8■□□□□ 0.12
SIRPB3P-201ENST00000340424 SLF1Q9BQI6 1058 aa15.8■□□□□ 0.12
SIRPB3P-201ENST00000340424 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.8■□□□□ 0.12
SIRPB3P-201ENST00000340424 HMX1Q9NP08 348 aaPredicted RBP15.8■□□□□ 0.12
SIRPB3P-201ENST00000340424 SLC5A4Q9NY91 659 aa15.8■□□□□ 0.12
SIRPB3P-201ENST00000340424 VWA5AO00534 786 aa15.79■□□□□ 0.12
SIRPB3P-201ENST00000340424 ERCC3P19447 782 aa15.79■□□□□ 0.12
SIRPB3P-201ENST00000340424 FAM47AQ5JRC9 791 aa15.79■□□□□ 0.12
SIRPB3P-201ENST00000340424 CHRDL2Q6WN34 429 aa15.79■□□□□ 0.12
SIRPB3P-201ENST00000340424 ZNF589Q86UQ0 364 aaPredicted RBP15.79■□□□□ 0.12
SIRPB3P-201ENST00000340424 PRPF38AQ8NAV1 312 aaKnown RBP15.79■□□□□ 0.12
SIRPB3P-201ENST00000340424 CRISPLD2Q9H0B8 497 aa15.79■□□□□ 0.12
SIRPB3P-201ENST00000340424 FDX1P10109 184 aa15.78■□□□□ 0.12
SIRPB3P-201ENST00000340424 PRKAR2AP13861 404 aaKnown RBP15.78■□□□□ 0.12
SIRPB3P-201ENST00000340424 CTDSPL2Q05D32 466 aa15.78■□□□□ 0.12
SIRPB3P-201ENST00000340424 PLS1Q14651 629 aa15.78■□□□□ 0.12
SIRPB3P-201ENST00000340424 TMEM132BQ14DG7 1078 aa15.78■□□□□ 0.12
SIRPB3P-201ENST00000340424 TTC22Q5TAA0 569 aa15.78■□□□□ 0.12
SIRPB3P-201ENST00000340424 CWC27Q6UX04 472 aaKnown RBP15.78■□□□□ 0.12
SIRPB3P-201ENST00000340424 RIOX2Q8IUF8 465 aa15.78■□□□□ 0.12
SIRPB3P-201ENST00000340424 ANKLE1Q8NAG6 615 aa15.78■□□□□ 0.12
SIRPB3P-201ENST00000340424 DEFB118Q96PH6 123 aa15.78■□□□□ 0.12
SIRPB3P-201ENST00000340424 RNF41Q9H4P4 317 aaPredicted RBP15.78■□□□□ 0.12
SIRPB3P-201ENST00000340424 FEM1BQ9UK73 627 aa15.78■□□□□ 0.12
SIRPB3P-201ENST00000340424 RAD50Q92878 1312 aa15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 RANBP6O60518 1105 aaKnown RBP15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 TFRCP02786 760 aaKnown RBP15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 NOVP48745 357 aa15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 MFSD14CQ5VZR4 134 aa15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 SLFN13Q68D06 897 aa15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 UBE2Q1Q7Z7E8 422 aa15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 DPP9Q86TI2 863 aa15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 NCAPG2Q86XI2 1143 aa15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 LRRC47Q8N1G4 583 aaKnown RBP15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 GMCL1Q96IK5 515 aa15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 DSCC1Q9BVC3 393 aa15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 TCP11L1Q9NUJ3 509 aa15.77■□□□□ 0.12
SIRPB3P-201ENST00000340424 FBXO28Q9NVF7 368 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms