RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 GPATCH4Q5T3I0 446 aaKnown RBP9.08□□□□□ -0.96
TMC1-202ENST00000340019 SLFN13Q68D06 897 aa9.08□□□□□ -0.96
TMC1-202ENST00000340019 FBXO18Q8NFZ0 1043 aa9.08□□□□□ -0.96
TMC1-202ENST00000340019 ALG1Q9BT22 464 aa9.08□□□□□ -0.96
TMC1-202ENST00000340019 V9GY48 417 aaPredicted RBP9.08□□□□□ -0.96
TMC1-202ENST00000340019 FRMPD2Q68DX3 1309 aaPredicted RBP9.08□□□□□ -0.96
TMC1-202ENST00000340019 KIAA1755Q5JYT7 1200 aa9.08□□□□□ -0.96
TMC1-202ENST00000340019 CLEC17AQ6ZS10 378 aa9.08□□□□□ -0.96
TMC1-202ENST00000340019 CCDC84Q86UT8 332 aaPredicted RBP9.08□□□□□ -0.96
TMC1-202ENST00000340019 WASF1Q92558 559 aa9.08□□□□□ -0.96
TMC1-202ENST00000340019 RIOX1Q9H6W3 641 aa9.08□□□□□ -0.96
TMC1-202ENST00000340019 GJB4Q9NTQ9 266 aa9.08□□□□□ -0.96
TMC1-202ENST00000340019 F13A1P00488 732 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 MAP3K11Q16584 847 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.07□□□□□ -0.96
TMC1-202ENST00000340019 SHISA4Q96DD7 197 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 C8orf76Q96K31 380 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 CPVLQ9H3G5 476 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 SH2D4AQ9H788 454 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 NMRK2Q9NPI5 230 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 RBM27Q9P2N5 1060 aaKnown RBP9.07□□□□□ -0.96
TMC1-202ENST00000340019 VPS37CA5D8V6 355 aaPredicted RBP9.07□□□□□ -0.96
TMC1-202ENST00000340019 PPP1R12BO60237 982 aaPredicted RBP9.07□□□□□ -0.96
TMC1-202ENST00000340019 PTPRAP18433 802 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 SLC1A4P43007 532 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 PFKFB3Q16875 520 aaPredicted RBP9.07□□□□□ -0.96
TMC1-202ENST00000340019 MAP1SQ66K74 1059 aaPredicted RBP9.07□□□□□ -0.96
TMC1-202ENST00000340019 KCTD1Q719H9 257 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 LDHDQ86WU2 507 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 WDR18Q9BV38 432 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 KIAA1683Q9H0B3 1180 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 VCPKMTQ9H867 229 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 GOPCQ9HD26 462 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 MYH15Q9Y2K3 1946 aa9.07□□□□□ -0.96
TMC1-202ENST00000340019 hCG_1642624A0A1W2PR95 340 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 H3BQV1 296 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 MAP3K9P80192 1104 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 AKAP17AQ02040 695 aaKnown RBP9.06□□□□□ -0.96
TMC1-202ENST00000340019 IFFO2Q5TF58 517 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 FOXD4L5Q5VV16 416 aaPredicted RBP9.06□□□□□ -0.96
TMC1-202ENST00000340019 TTBK2Q6IQ55 1244 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 FOXD4L4Q8WXT5 416 aaPredicted RBP9.06□□□□□ -0.96
TMC1-202ENST00000340019 UBA5Q9GZZ9 404 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 GPCPD1Q9NPB8 672 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 PICK1Q9NRD5 415 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 CLEC11AQ9Y240 323 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 TCHHQ07283 1943 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 PTPRFP10586 1907 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 PRKG1Q13976 671 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 VGLL4Q14135 290 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 OTUD7BQ6GQQ9 843 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 MTMR8Q96EF0 704 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 SNCAIPQ9Y6H5 919 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 BMP3P12645 472 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 SCG2P13521 617 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 NF2P35240 595 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 FOSBP53539 338 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 GUCY1B3Q02153 619 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 RESTQ13127 1097 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 CCDC96Q2M329 555 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 KRT40Q6A162 431 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 BTNL9Q6UXG8 535 aa9.06□□□□□ -0.96
TMC1-202ENST00000340019 NUP88Q99567 741 aaPredicted RBP9.06□□□□□ -0.96
TMC1-202ENST00000340019 TRAF5O00463 557 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 IREB2P48200 963 aaKnown RBP9.05□□□□□ -0.96
TMC1-202ENST00000340019 ADGRF4Q8IZF3 695 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 SPICE1Q8N0Z3 855 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 ZNF280CQ8ND82 737 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 JMJD4Q9H9V9 463 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 AS3MTQ9HBK9 375 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 PARP14Q460N5 1801 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 USP17L10C9JJH3 530 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 RAD21O60216 631 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 MMP1P03956 469 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 SLC16A2P36021 539 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 BACE1P56817 501 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 FERMT3Q86UX7 667 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 LPAR1Q92633 364 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 PIGSQ96S52 555 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 VPS54Q9P1Q0 977 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 AFG3L2Q9Y4W6 797 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 ZHX2Q9Y6X8 837 aa9.05□□□□□ -0.96
TMC1-202ENST00000340019 PLA2G6O60733 806 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 BAG4O95429 457 aaKnown RBP9.04□□□□□ -0.96
TMC1-202ENST00000340019 SPP2Q13103 211 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 MTMR2Q13614 643 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 MOB2Q70IA6 237 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 ANKRD13AQ8IZ07 590 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 ZNF526Q8TF50 670 aaPredicted RBP9.04□□□□□ -0.96
TMC1-202ENST00000340019 RRP36Q96EU6 259 aaKnown RBP9.04□□□□□ -0.96
TMC1-202ENST00000340019 FEZ1Q99689 392 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 PHF20Q9BVI0 1012 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 ZSCAN16Q9H4T2 348 aaPredicted RBP9.04□□□□□ -0.96
TMC1-202ENST00000340019 SH3GLB2Q9NR46 395 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 EMILIN3Q9NT22 766 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 KIF23Q02241 960 aaPredicted RBP9.04□□□□□ -0.96
TMC1-202ENST00000340019 FMR1Q06787 632 aaKnown RBP eCLIP9.04□□□□□ -0.96
TMC1-202ENST00000340019 TRIM29Q14134 588 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 NPY5RQ15761 445 aa9.04□□□□□ -0.96
TMC1-202ENST00000340019 ZYXQ15942 572 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms