RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 MAP3K14Q99558 947 aa17.18■□□□□ 0.34
CSRP1-201ENST00000340006 RBM28Q9NW13 759 aaKnown RBP17.18■□□□□ 0.34
CSRP1-201ENST00000340006 PHIPQ8WWQ0 1821 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 CDC27P30260 824 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 RCAN1P53805 252 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 IKQ13123 557 aaPredicted RBP17.17■□□□□ 0.34
CSRP1-201ENST00000340006 PPIL2Q13356 520 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 CMTR1Q8N1G2 835 aaKnown RBP17.17■□□□□ 0.34
CSRP1-201ENST00000340006 STAG2Q8N3U4 1231 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 NUP88Q99567 741 aaPredicted RBP17.17■□□□□ 0.34
CSRP1-201ENST00000340006 MAD2L2Q9UI95 211 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 KLRF2D3W0D1 207 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 CXCL11O14625 94 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 BMP3P12645 472 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 DGKZQ13574 1117 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 GRM4Q14833 912 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 RASGRP2Q7LDG7 609 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 DCAF4Q8WV16 495 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 EMILIN3Q9NT22 766 aa17.17■□□□□ 0.34
CSRP1-201ENST00000340006 PPFIA3O75145 1194 aa17.16■□□□□ 0.34
CSRP1-201ENST00000340006 GNAQP50148 359 aa17.16■□□□□ 0.34
CSRP1-201ENST00000340006 KIAA1755Q5JYT7 1200 aa17.16■□□□□ 0.34
CSRP1-201ENST00000340006 GPATCH4Q5T3I0 446 aaKnown RBP17.16■□□□□ 0.34
CSRP1-201ENST00000340006 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
CSRP1-201ENST00000340006 LPAR1Q92633 364 aa17.16■□□□□ 0.34
CSRP1-201ENST00000340006 GMCL1Q96IK5 515 aa17.16■□□□□ 0.34
CSRP1-201ENST00000340006 VAT1LQ9HCJ6 419 aa17.16■□□□□ 0.34
CSRP1-201ENST00000340006 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.16■□□□□ 0.34
CSRP1-201ENST00000340006 PALM3A6NDB9 673 aaPredicted RBP17.15■□□□□ 0.34
CSRP1-201ENST00000340006 TMEM232C9JQI7 657 aa17.15■□□□□ 0.34
CSRP1-201ENST00000340006 DTNBO60941 627 aa17.15■□□□□ 0.34
CSRP1-201ENST00000340006 ASPRV1Q53RT3 343 aa17.15■□□□□ 0.34
CSRP1-201ENST00000340006 FAM83BQ5T0W9 1011 aa17.15■□□□□ 0.34
CSRP1-201ENST00000340006 RGMBQ6NW40 437 aa17.15■□□□□ 0.34
CSRP1-201ENST00000340006 GADL1Q6ZQY3 521 aa17.15■□□□□ 0.34
CSRP1-201ENST00000340006 PAXIP1Q6ZW49 1069 aaPredicted RBP17.15■□□□□ 0.34
CSRP1-201ENST00000340006 WNK4Q96J92 1243 aa17.15■□□□□ 0.34
CSRP1-201ENST00000340006 UBA5Q9GZZ9 404 aa17.15■□□□□ 0.34
CSRP1-201ENST00000340006 FAM217BQ9NTX9 383 aaPredicted RBP17.15■□□□□ 0.34
CSRP1-201ENST00000340006 TLL2Q9Y6L7 1015 aa17.15■□□□□ 0.34
CSRP1-201ENST00000340006 BAZ2BQ9UIF8 2168 aaKnown RBP17.15■□□□□ 0.34
CSRP1-201ENST00000340006 ZNF543Q08ER8 600 aa17.15■□□□□ 0.34
CSRP1-201ENST00000340006 CDKL5O76039 1030 aa17.14■□□□□ 0.33
CSRP1-201ENST00000340006 PLEKHA8P1O95397 391 aa17.14■□□□□ 0.33
CSRP1-201ENST00000340006 SNHG28P0DPA3 235 aa17.14■□□□□ 0.33
CSRP1-201ENST00000340006 SLC16A2P36021 539 aa17.14■□□□□ 0.33
CSRP1-201ENST00000340006 GRM1Q13255 1194 aa17.14■□□□□ 0.33
CSRP1-201ENST00000340006 SNAPC2Q13487 334 aa17.14■□□□□ 0.33
CSRP1-201ENST00000340006 TTBK2Q6IQ55 1244 aa17.14■□□□□ 0.33
CSRP1-201ENST00000340006 PIBF1Q8WXW3 757 aa17.14■□□□□ 0.33
CSRP1-201ENST00000340006 LZTS2Q9BRK4 669 aa17.14■□□□□ 0.33
CSRP1-201ENST00000340006 TANGO6Q9C0B7 1094 aa17.14■□□□□ 0.33
CSRP1-201ENST00000340006 GJA5P36382 358 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 APLP1P51693 650 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 AKAP17AQ02040 695 aaKnown RBP17.13■□□□□ 0.33
CSRP1-201ENST00000340006 SSRP1Q08945 709 aaKnown RBP17.13■□□□□ 0.33
CSRP1-201ENST00000340006 CUL4AQ13619 759 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 SPRYD7Q5W111 196 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 SRBD1Q8N5C6 995 aaKnown RBP17.13■□□□□ 0.33
CSRP1-201ENST00000340006 PHKBQ93100 1093 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 CPVLQ9H3G5 476 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 SMC3Q9UQE7 1217 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 WDR46O15213 610 aaKnown RBP17.13■□□□□ 0.33
CSRP1-201ENST00000340006 VCAM1P19320 739 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 GTF2A2P52657 109 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 SH3D19Q5HYK7 790 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 TMTC3Q6ZXV5 915 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 FASTKD5Q7L8L6 764 aaKnown RBP17.13■□□□□ 0.33
CSRP1-201ENST00000340006 TRIM22Q8IYM9 498 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 CHURC1Q8WUH1 139 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 DDX11Q96FC9 970 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 LLPHQ9BRT6 129 aaKnown RBP17.13■□□□□ 0.33
CSRP1-201ENST00000340006 SLC26A6Q9BXS9 759 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 RPAP3Q9H6T3 665 aaPredicted RBP17.13■□□□□ 0.33
CSRP1-201ENST00000340006 KCNH4Q9UQ05 1017 aa17.13■□□□□ 0.33
CSRP1-201ENST00000340006 ZBTB48P10074 688 aaPredicted RBP17.12■□□□□ 0.33
CSRP1-201ENST00000340006 STAT2P52630 851 aa17.12■□□□□ 0.33
CSRP1-201ENST00000340006 ST3GAL1Q11201 340 aa17.12■□□□□ 0.33
CSRP1-201ENST00000340006 NBPF11Q86T75 865 aa17.12■□□□□ 0.33
CSRP1-201ENST00000340006 CCDC102AQ96A19 550 aa17.12■□□□□ 0.33
CSRP1-201ENST00000340006 INTS4Q96HW7 963 aaKnown RBP17.12■□□□□ 0.33
CSRP1-201ENST00000340006 V9GY48 417 aaPredicted RBP17.12■□□□□ 0.33
CSRP1-201ENST00000340006 A0A0G2JLL6 359 aaPredicted RBP17.11■□□□□ 0.33
CSRP1-201ENST00000340006 CETPP11597 493 aa17.11■□□□□ 0.33
CSRP1-201ENST00000340006 IFNAR1P17181 557 aa17.11■□□□□ 0.33
CSRP1-201ENST00000340006 NTRK3Q16288 839 aa17.11■□□□□ 0.33
CSRP1-201ENST00000340006 PRRT2Q7Z6L0 340 aaPredicted RBP17.11■□□□□ 0.33
CSRP1-201ENST00000340006 KIFC2Q96AC6 838 aa17.11■□□□□ 0.33
CSRP1-201ENST00000340006 FEM1BQ9UK73 627 aa17.11■□□□□ 0.33
CSRP1-201ENST00000340006 JAK2O60674 1132 aa17.11■□□□□ 0.33
CSRP1-201ENST00000340006 FLOT1O75955 427 aa17.11■□□□□ 0.33
CSRP1-201ENST00000340006 CTDNEP1O95476 244 aa17.11■□□□□ 0.33
CSRP1-201ENST00000340006 DEFB115Q30KQ5 88 aa17.11■□□□□ 0.33
CSRP1-201ENST00000340006 ADGRF4Q8IZF3 695 aa17.11■□□□□ 0.33
CSRP1-201ENST00000340006 FAM184AQ8NB25 1140 aa17.11■□□□□ 0.33
CSRP1-201ENST00000340006 PROCA1Q8NCQ7 364 aaPredicted RBP17.11■□□□□ 0.33
CSRP1-201ENST00000340006 C12orf42Q96LP6 360 aa17.11■□□□□ 0.33
CSRP1-201ENST00000340006 CREBZFQ9NS37 354 aa17.11■□□□□ 0.33
CSRP1-201ENST00000340006 NID2Q14112 1375 aa17.1■□□□□ 0.33
CSRP1-201ENST00000340006 hCG_1642624A0A1W2PR95 340 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms