RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 NUTM2FA1L443 756 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 HGSO14964 777 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 SURF6O75683 361 aaKnown RBP10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 TUBBP07437 444 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 FAM153BP0C7A2 387 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 BMP6P22004 513 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 ALDH3A1P30838 453 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 STAT6P42226 847 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 FAM153CQ494X1 144 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 C14orf80Q86SX3 495 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 FAM153AQ9UHL3 310 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 ZNF510Q9Y2H8 683 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 SBNO1A3KN83 1393 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 HMGB1P09429 215 aaKnown RBP10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 FXR1P51114 621 aaKnown RBP eCLIP10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 CACNA2D3Q8IZS8 1091 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 SLC17A8Q8NDX2 589 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 OR2W6PQ8NHA6 318 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 NDST4Q9H3R1 872 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 NLRP2Q9NX02 1062 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 ZMYND8Q9ULU4 1186 aaPredicted RBP10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 TRPM2O94759 1503 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 COL3A1P02461 1466 aaPredicted RBP10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 GFPT2O94808 682 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 TCERG1LQ5VWI1 586 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 RASGRP2Q7LDG7 609 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 BRAPQ7Z569 592 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 SDCCAG8Q86SQ7 713 aaPredicted RBP10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 ARPC5LQ9BPX5 153 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 TM6SF1Q9BZW5 370 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 AGAP1Q9UPQ3 857 aa10.74□□□□□ -0.69
PTCHD4-201ENST00000339488 KIF24Q5T7B8 1368 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 PTPDC1A2A3K4 754 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 RNF225M0QZC1 329 aaPredicted RBP10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 SPATA31D3P0C874 917 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 GJA8P48165 433 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 ALDH5A1P51649 535 aaPredicted RBP10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 ZMYM1Q5SVZ6 1142 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 FOXB2Q5VYV0 432 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 OLFM4Q6UX06 510 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 SPATA31D4Q6ZUB0 917 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 PPFIBP1Q86W92 1011 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 FAM114A1Q8IWE2 563 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 CCT6BQ92526 530 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 CNKSR1Q969H4 720 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 JAKMIP2Q96AA8 810 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 DLGAP2Q9P1A6 1054 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 SAR1BQ9Y6B6 198 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 ZC3H13Q5T200 1668 aaKnown RBP10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 STXBP3O00186 592 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 MCM3P25205 808 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 ADALQ6DHV7 355 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 TMEM154Q6P9G4 183 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 MAATS1Q7Z4T9 603 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 SNRNP27Q8WVK2 155 aaKnown RBP10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 DYDC1Q8WWB3 177 aa10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 RBM33Q96EV2 1170 aaKnown RBP10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 NAF1Q96HR8 494 aaKnown RBP10.73□□□□□ -0.69
PTCHD4-201ENST00000339488 GMNCA6NCL1 334 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 DNAJC8O75937 253 aaPredicted RBP10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 KIF5BP33176 963 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 PCK1P35558 622 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 STX17P56962 302 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 ZC3H6P61129 1189 aaKnown RBP10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 DEUP1Q05D60 604 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 ALS2CLQ60I27 953 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 SEPT14Q6ZU15 432 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 ARHGAP27Q6ZUM4 889 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 FOXP4Q8IVH2 680 aaPredicted RBP10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 BRD8Q9H0E9 1235 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 C19orf44Q9H6X5 657 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 SPATA7Q9P0W8 599 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 SETD1AO15047 1707 aaKnown RBP10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 FER1L4A9Z1Z3 1794 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 NMIQ13287 307 aaPredicted RBP10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 P3H1Q32P28 736 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 CFAP58Q5T655 872 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 OLFML1Q6UWY5 402 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 FAM47EQ6ZV65 393 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 RAB11FIP4Q86YS3 637 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 GPIHBP1Q8IV16 184 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 NDNQ99608 321 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 JADE2Q9NQC1 790 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 UBN2Q6ZU65 1347 aa10.72□□□□□ -0.69
PTCHD4-201ENST00000339488 GOLGA6L10A6NI86 522 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 PPIP5K2O43314 1243 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 SUPT3HO75486 399 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 CTDNEP1O95476 244 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 CXCR5P32302 372 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 USP46P62068 366 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 KLHL10Q6JEL2 608 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 GRAMD1CQ8IYS0 662 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 LINC00301Q8NCQ3 95 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 ZFAND2BQ8WV99 257 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 UCMAQ8WVF2 138 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 IFT81Q8WYA0 676 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 CHP1Q99653 195 aa10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 LBHD1Q9BQE6 289 aaPredicted RBP10.71□□□□□ -0.69
PTCHD4-201ENST00000339488 TMOD4Q9NZQ9 345 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms