RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 RRAGCQ9HB90 399 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 BRMS1Q9HCU9 246 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 PCDHAC2Q9Y5I4 1007 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 FLT1P17948 1338 aa12.73□□□□□ -0.37
LRP1-202ENST00000338962 MYH6P13533 1939 aa12.72□□□□□ -0.37
LRP1-202ENST00000338962 ZNF202O95125 648 aa12.72□□□□□ -0.37
LRP1-202ENST00000338962 TBC1D10BQ4KMP7 808 aaPredicted RBP12.72□□□□□ -0.37
LRP1-202ENST00000338962 PNMA1Q8ND90 353 aa12.72□□□□□ -0.37
LRP1-202ENST00000338962 ZC3H15Q8WU90 426 aaKnown RBP12.72□□□□□ -0.37
LRP1-202ENST00000338962 IL17RBQ9NRM6 502 aa12.72□□□□□ -0.37
LRP1-202ENST00000338962 ANO10Q9NW15 660 aa12.72□□□□□ -0.37
LRP1-202ENST00000338962 PGAP2Q9UHJ9 254 aa12.72□□□□□ -0.37
LRP1-202ENST00000338962 CNTNAP5Q8WYK1 1306 aa12.72□□□□□ -0.37
LRP1-202ENST00000338962 KRT2P35908 639 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 SYKP43405 635 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 TOB1P50616 345 aaPredicted RBP12.71□□□□□ -0.37
LRP1-202ENST00000338962 RBM5P52756 815 aaKnown RBP eCLIP12.71□□□□□ -0.37
LRP1-202ENST00000338962 RHBDL3P58872 404 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 NBPF9Q3BBW0 867 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 SRBD1Q8N5C6 995 aaKnown RBP12.71□□□□□ -0.37
LRP1-202ENST00000338962 SLC44A5Q8NCS7 719 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 OXER1Q8TDS5 423 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 PHF20Q9BVI0 1012 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 NMRK2Q9NPI5 230 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 CEP131Q9UPN4 1083 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 ZKSCAN5Q9Y2L8 839 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 GOLGA6L19H0YKK7 550 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 CUTAO60888 179 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 RBM26Q5T8P6 1007 aaKnown RBP12.71□□□□□ -0.37
LRP1-202ENST00000338962 CDC42EP5Q6NZY7 148 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 SHC4Q6S5L8 630 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.71□□□□□ -0.37
LRP1-202ENST00000338962 KRI1Q8N9T8 703 aaKnown RBP12.71□□□□□ -0.37
LRP1-202ENST00000338962 NAT10Q9H0A0 1025 aaKnown RBP12.71□□□□□ -0.37
LRP1-202ENST00000338962 CABP5Q9NP86 173 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 STX8Q9UNK0 236 aa12.71□□□□□ -0.37
LRP1-202ENST00000338962 RESP18Q5W5W9 173 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 CEP57L1Q8IYX8 460 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 ANKS1AQ92625 1134 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 ERCC4Q92889 916 aaPredicted RBP12.7□□□□□ -0.38
LRP1-202ENST00000338962 CLIC6Q96NY7 704 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 TCP11L1Q9NUJ3 509 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 KIAA1468Q9P260 1216 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 AP5Z1O43299 807 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 MYO1BO43795 1136 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 SCG2P13521 617 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 RASA1P20936 1047 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 SPDYE2Q495Y8 402 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 FKBP1CQ5VVH2 108 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 C11orf57Q6ZUT1 292 aaPredicted RBP12.7□□□□□ -0.38
LRP1-202ENST00000338962 C16orf86Q6ZW13 317 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 ZNF526Q8TF50 670 aaPredicted RBP12.7□□□□□ -0.38
LRP1-202ENST00000338962 TIGD1Q96MW7 591 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 TDRD3Q9H7E2 651 aaKnown RBP12.7□□□□□ -0.38
LRP1-202ENST00000338962 GPBP1L1Q9HC44 474 aaPredicted RBP12.7□□□□□ -0.38
LRP1-202ENST00000338962 HPSEQ9Y251 543 aa12.7□□□□□ -0.38
LRP1-202ENST00000338962 BECN2A8MW95 431 aa12.69□□□□□ -0.38
LRP1-202ENST00000338962 NPM3O75607 178 aaKnown RBP12.69□□□□□ -0.38
LRP1-202ENST00000338962 ATP2B1P20020 1258 aa12.69□□□□□ -0.38
LRP1-202ENST00000338962 CDK8P49336 464 aa12.69□□□□□ -0.38
LRP1-202ENST00000338962 GNAQP50148 359 aa12.69□□□□□ -0.38
LRP1-202ENST00000338962 TERF1P54274 439 aa12.69□□□□□ -0.38
LRP1-202ENST00000338962 SHISA4Q96DD7 197 aa12.69□□□□□ -0.38
LRP1-202ENST00000338962 IDI2Q9BXS1 227 aa12.69□□□□□ -0.38
LRP1-202ENST00000338962 USP40Q9NVE5 1235 aa12.69□□□□□ -0.38
LRP1-202ENST00000338962 ZNF70Q9UC06 446 aaPredicted RBP12.69□□□□□ -0.38
LRP1-202ENST00000338962 PCDHB6Q9Y5E3 794 aa12.69□□□□□ -0.38
LRP1-202ENST00000338962 CDK5RAP2Q96SN8 1893 aa12.69□□□□□ -0.38
LRP1-202ENST00000338962 PITPNM2Q9BZ72 1349 aa12.69□□□□□ -0.38
LRP1-202ENST00000338962 FAM237AA0A1B0GTK4 181 aa12.69□□□□□ -0.38
LRP1-202ENST00000338962 PFKFB3Q16875 520 aaPredicted RBP12.69□□□□□ -0.38
LRP1-202ENST00000338962 PIBF1Q8WXW3 757 aa12.69□□□□□ -0.38
LRP1-202ENST00000338962 DDX60LQ5H9U9 1706 aaKnown RBP12.68□□□□□ -0.38
LRP1-202ENST00000338962 TRIM75PA6NK02 468 aa12.68□□□□□ -0.38
LRP1-202ENST00000338962 GOLGA6L6A8MZA4 724 aa12.68□□□□□ -0.38
LRP1-202ENST00000338962 PTPREP23469 700 aa12.68□□□□□ -0.38
LRP1-202ENST00000338962 PICALMQ13492 652 aa12.68□□□□□ -0.38
LRP1-202ENST00000338962 ZNF784Q8NCA9 323 aaPredicted RBP12.68□□□□□ -0.38
LRP1-202ENST00000338962 TRIM5Q9C035 493 aa12.68□□□□□ -0.38
LRP1-202ENST00000338962 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
LRP1-202ENST00000338962 KCNH3Q9ULD8 1083 aa12.68□□□□□ -0.38
LRP1-202ENST00000338962 SCN4AP35499 1836 aa12.68□□□□□ -0.38
LRP1-202ENST00000338962 A0A087WWV3 80 aa12.67□□□□□ -0.38
LRP1-202ENST00000338962 KIF3CO14782 793 aa12.67□□□□□ -0.38
LRP1-202ENST00000338962 NLRP5P59047 1200 aa12.67□□□□□ -0.38
LRP1-202ENST00000338962 GRM4Q14833 912 aa12.67□□□□□ -0.38
LRP1-202ENST00000338962 IQCB1Q15051 598 aa12.67□□□□□ -0.38
LRP1-202ENST00000338962 TMEM47Q9BQJ4 181 aa12.67□□□□□ -0.38
LRP1-202ENST00000338962 FAM13BQ9NYF5 915 aa12.67□□□□□ -0.38
LRP1-202ENST00000338962 FBXO2Q9UK22 296 aaPredicted RBP12.67□□□□□ -0.38
LRP1-202ENST00000338962 BAZ2BQ9UIF8 2168 aaKnown RBP12.67□□□□□ -0.38
LRP1-202ENST00000338962 ASTN2O75129 1339 aaPredicted RBP12.67□□□□□ -0.38
LRP1-202ENST00000338962 BMP15O95972 392 aa12.67□□□□□ -0.38
LRP1-202ENST00000338962 ANGEL2Q5VTE6 544 aaKnown RBP12.67□□□□□ -0.38
LRP1-202ENST00000338962 FAM83AQ86UY5 434 aa12.67□□□□□ -0.38
LRP1-202ENST00000338962 LDHDQ86WU2 507 aa12.67□□□□□ -0.38
LRP1-202ENST00000338962 STAG2Q8N3U4 1231 aa12.67□□□□□ -0.38
LRP1-202ENST00000338962 NEDD1Q8NHV4 660 aa12.67□□□□□ -0.38
LRP1-202ENST00000338962 MAD2L2Q9UI95 211 aa12.67□□□□□ -0.38
LRP1-202ENST00000338962 MTMR7Q9Y216 660 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms