RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 CALM2P0DP24 149 aa22.53■■□□□ 1.2
CDCA4-201ENST00000336219 CALM3P0DP25 149 aa22.53■■□□□ 1.2
CDCA4-201ENST00000336219 VSNL1P62760 191 aa22.53■■□□□ 1.2
CDCA4-201ENST00000336219 ERVK-24P63145 666 aa22.53■■□□□ 1.2
CDCA4-201ENST00000336219 UBE4AQ14139 1066 aa22.53■■□□□ 1.2
CDCA4-201ENST00000336219 CDKAL1Q5VV42 579 aa22.53■■□□□ 1.2
CDCA4-201ENST00000336219 ACSBG1Q96GR2 724 aa22.53■■□□□ 1.2
CDCA4-201ENST00000336219 CTNND2Q9UQB3 1225 aa22.53■■□□□ 1.2
CDCA4-201ENST00000336219 PPP1R3GB7ZBB8 358 aa22.52■■□□□ 1.2
CDCA4-201ENST00000336219 PCP11498 1178 aaKnown RBP22.52■■□□□ 1.2
CDCA4-201ENST00000336219 ANKRD18AQ8IVF6 992 aa22.52■■□□□ 1.2
CDCA4-201ENST00000336219 CEP112Q8N8E3 955 aa22.52■■□□□ 1.2
CDCA4-201ENST00000336219 ZNF384Q8TF68 577 aa22.52■■□□□ 1.2
CDCA4-201ENST00000336219 EXOC4Q96A65 974 aa22.52■■□□□ 1.2
CDCA4-201ENST00000336219 GSDMAQ96QA5 445 aa22.52■■□□□ 1.2
CDCA4-201ENST00000336219 BRMS1Q9HCU9 246 aa22.52■■□□□ 1.2
CDCA4-201ENST00000336219 TMTC3Q6ZXV5 915 aa22.52■■□□□ 1.19
CDCA4-201ENST00000336219 BLZF1Q9H2G9 400 aa22.52■■□□□ 1.19
CDCA4-201ENST00000336219 CTAGE9A4FU28 777 aa22.51■■□□□ 1.19
CDCA4-201ENST00000336219 ZNF174Q15697 407 aa22.51■■□□□ 1.19
CDCA4-201ENST00000336219 CTR9Q6PD62 1173 aa22.51■■□□□ 1.19
CDCA4-201ENST00000336219 DDAH1O94760 285 aa22.51■■□□□ 1.19
CDCA4-201ENST00000336219 TTC38Q5R3I4 469 aa22.51■■□□□ 1.19
CDCA4-201ENST00000336219 MSANTD4Q8NCY6 345 aa22.51■■□□□ 1.19
CDCA4-201ENST00000336219 RAB21Q9UL25 225 aa22.51■■□□□ 1.19
CDCA4-201ENST00000336219 FAN1Q9Y2M0 1017 aa22.51■■□□□ 1.19
CDCA4-201ENST00000336219 CNTNAP5Q8WYK1 1306 aa22.5■■□□□ 1.19
CDCA4-201ENST00000336219 MYH13Q9UKX3 1938 aa22.5■■□□□ 1.19
CDCA4-201ENST00000336219 CAVIN4Q5BKX8 364 aa22.5■■□□□ 1.19
CDCA4-201ENST00000336219 NOA1Q8NC60 698 aaKnown RBP22.5■■□□□ 1.19
CDCA4-201ENST00000336219 NAA15Q9BXJ9 866 aaKnown RBP22.5■■□□□ 1.19
CDCA4-201ENST00000336219 VPS16Q9H269 839 aa22.5■■□□□ 1.19
CDCA4-201ENST00000336219 L1RE1Q9UN81 338 aa22.5■■□□□ 1.19
CDCA4-201ENST00000336219 PHACTR2O75167 634 aa22.5■■□□□ 1.19
CDCA4-201ENST00000336219 C3orf67Q6ZVT6 689 aa22.5■■□□□ 1.19
CDCA4-201ENST00000336219 HDXQ7Z353 690 aa22.5■■□□□ 1.19
CDCA4-201ENST00000336219 MYH8P13535 1937 aa22.5■■□□□ 1.19
CDCA4-201ENST00000336219 ATP2C1P98194 919 aaPredicted RBP22.49■■□□□ 1.19
CDCA4-201ENST00000336219 NCAPH2Q6IBW4 605 aa22.49■■□□□ 1.19
CDCA4-201ENST00000336219 HNRNPLLQ8WVV9 542 aaKnown RBP22.49■■□□□ 1.19
CDCA4-201ENST00000336219 BSDC1Q9NW68 430 aaPredicted RBP22.49■■□□□ 1.19
CDCA4-201ENST00000336219 TRIM10Q9UDY6 481 aa22.49■■□□□ 1.19
CDCA4-201ENST00000336219 ZNF652Q9Y2D9 606 aa22.49■■□□□ 1.19
CDCA4-201ENST00000336219 USP17L12C9JPN9 530 aa22.49■■□□□ 1.19
CDCA4-201ENST00000336219 USP17L21D6R901 530 aa22.49■■□□□ 1.19
CDCA4-201ENST00000336219 USP5P45974 858 aa22.49■■□□□ 1.19
CDCA4-201ENST00000336219 PTGDRQ13258 359 aa22.49■■□□□ 1.19
CDCA4-201ENST00000336219 DDB1Q16531 1140 aa22.49■■□□□ 1.19
CDCA4-201ENST00000336219 ERFEQ4G0M1 354 aa22.49■■□□□ 1.19
CDCA4-201ENST00000336219 FOXR1Q6PIV2 292 aa22.49■■□□□ 1.19
CDCA4-201ENST00000336219 C10orf67Q8IYJ2 551 aa22.49■■□□□ 1.19
CDCA4-201ENST00000336219 FAM84BQ96KN1 310 aaPredicted RBP22.49■■□□□ 1.19
CDCA4-201ENST00000336219 SLF1Q9BQI6 1058 aa22.49■■□□□ 1.19
CDCA4-201ENST00000336219 CDCA7Q9BWT1 371 aaPredicted RBP22.49■■□□□ 1.19
CDCA4-201ENST00000336219 RNF216Q9NWF9 866 aaPredicted RBP22.49■■□□□ 1.19
CDCA4-201ENST00000336219 BAZ2BQ9UIF8 2168 aaKnown RBP22.48■■□□□ 1.19
CDCA4-201ENST00000336219 LAMB1P07942 1786 aa22.48■■□□□ 1.19
CDCA4-201ENST00000336219 SEMA3EO15041 775 aa22.48■■□□□ 1.19
CDCA4-201ENST00000336219 ARHGAP25P42331 645 aa22.48■■□□□ 1.19
CDCA4-201ENST00000336219 KRT31Q15323 416 aa22.48■■□□□ 1.19
CDCA4-201ENST00000336219 SF3B3Q15393 1217 aaKnown RBP22.48■■□□□ 1.19
CDCA4-201ENST00000336219 SRBD1Q8N5C6 995 aaKnown RBP22.48■■□□□ 1.19
CDCA4-201ENST00000336219 GOLGA5Q8TBA6 731 aa22.48■■□□□ 1.19
CDCA4-201ENST00000336219 CTAGE1Q96RT6 745 aa22.48■■□□□ 1.19
CDCA4-201ENST00000336219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.48■■□□□ 1.19
CDCA4-201ENST00000336219 FILIP1LQ4L180 1135 aa22.48■■□□□ 1.19
CDCA4-201ENST00000336219 TAB2Q9NYJ8 693 aa22.48■■□□□ 1.19
CDCA4-201ENST00000336219 MINPP1Q9UNW1 487 aa22.48■■□□□ 1.19
CDCA4-201ENST00000336219 TFR2Q9UP52 801 aa22.48■■□□□ 1.19
CDCA4-201ENST00000336219 NAPGQ99747 312 aaPredicted RBP22.47■■□□□ 1.19
CDCA4-201ENST00000336219 ABHD10Q9NUJ1 306 aa22.47■■□□□ 1.19
CDCA4-201ENST00000336219 XDHP47989 1333 aa22.47■■□□□ 1.19
CDCA4-201ENST00000336219 N4BP3O15049 544 aa22.47■■□□□ 1.19
CDCA4-201ENST00000336219 EVX2Q03828 476 aa22.47■■□□□ 1.19
CDCA4-201ENST00000336219 E2F4Q16254 413 aa22.47■■□□□ 1.19
CDCA4-201ENST00000336219 CNGA4Q8IV77 575 aa22.47■■□□□ 1.19
CDCA4-201ENST00000336219 CTCFLQ8NI51 663 aaPredicted RBP22.47■■□□□ 1.19
CDCA4-201ENST00000336219 PSD3Q9NYI0 1048 aa22.47■■□□□ 1.19
CDCA4-201ENST00000336219 MAPK8IP1Q9UQF2 711 aa22.47■■□□□ 1.19
CDCA4-201ENST00000336219 MYO1CO00159 1063 aa22.46■■□□□ 1.19
CDCA4-201ENST00000336219 ORC4O43929 436 aa22.46■■□□□ 1.19
CDCA4-201ENST00000336219 ACTN2P35609 894 aa22.46■■□□□ 1.19
CDCA4-201ENST00000336219 NUP88Q99567 741 aaPredicted RBP22.46■■□□□ 1.19
CDCA4-201ENST00000336219 COL5A3P25940 1745 aaPredicted RBP22.46■■□□□ 1.19
CDCA4-201ENST00000336219 NMT2O60551 498 aa22.46■■□□□ 1.19
CDCA4-201ENST00000336219 CASP8Q14790 479 aa22.46■■□□□ 1.19
CDCA4-201ENST00000336219 CCDC102AQ96A19 550 aa22.46■■□□□ 1.19
CDCA4-201ENST00000336219 NSUN4Q96CB9 384 aaKnown RBP22.46■■□□□ 1.19
CDCA4-201ENST00000336219 CHP1Q99653 195 aa22.46■■□□□ 1.19
CDCA4-201ENST00000336219 CTAGE15A4D2H0 777 aa22.45■■□□□ 1.18
CDCA4-201ENST00000336219 LRRIQ3A6PVS8 624 aaPredicted RBP22.45■■□□□ 1.18
CDCA4-201ENST00000336219 CTAGE8P0CG41 777 aa22.45■■□□□ 1.18
CDCA4-201ENST00000336219 SLC20A2Q08357 652 aa22.45■■□□□ 1.18
CDCA4-201ENST00000336219 RRAGBQ5VZM2 374 aa22.45■■□□□ 1.18
CDCA4-201ENST00000336219 CLEC4GQ6UXB4 293 aa22.45■■□□□ 1.18
CDCA4-201ENST00000336219 CTAGE6Q86UF2 777 aa22.45■■□□□ 1.18
CDCA4-201ENST00000336219 CTAGE4Q8IX94 777 aa22.45■■□□□ 1.18
CDCA4-201ENST00000336219 MARCH10Q8NA82 808 aaPredicted RBP22.45■■□□□ 1.18
CDCA4-201ENST00000336219 TTF2Q9UNY4 1162 aaKnown RBP22.45■■□□□ 1.18
CDCA4-201ENST00000336219 ROBO1Q9Y6N7 1651 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms