RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PODNQ7Z5L7 613 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 MARCH10Q8NA82 808 aaPredicted RBP16.75■□□□□ 0.27
C9orf47-201ENST00000334490 FBXO18Q8NFZ0 1043 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.75■□□□□ 0.27
C9orf47-201ENST00000334490 ARHGEF40Q8TER5 1519 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 STX10O60499 249 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 CACNB3P54284 484 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 SMC1AQ14683 1233 aaKnown RBP16.75■□□□□ 0.27
C9orf47-201ENST00000334490 METTL13Q8N6R0 699 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 IGSF22Q8N9C0 903 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 LZTFL1Q9NQ48 299 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 NFE2L3Q9Y4A8 694 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 COMMD10Q9Y6G5 202 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 BMP3P12645 472 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 CCNA1P78396 465 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 MTX1Q13505 466 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 ADALQ6DHV7 355 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 DDX25Q9UHL0 483 aaKnown RBP16.75■□□□□ 0.27
C9orf47-201ENST00000334490 MTMR6Q9Y217 621 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 KDM3AQ9Y4C1 1321 aa16.74■□□□□ 0.27
C9orf47-201ENST00000334490 FOXP4Q8IVH2 680 aaPredicted RBP16.74■□□□□ 0.27
C9orf47-201ENST00000334490 CROCC2H7BZ55 1655 aa16.74■□□□□ 0.27
C9orf47-201ENST00000334490 KARSQ15046 597 aaKnown RBP16.74■□□□□ 0.27
C9orf47-201ENST00000334490 DPP9Q86TI2 863 aa16.74■□□□□ 0.27
C9orf47-201ENST00000334490 AKR1B15C9JRZ8 316 aaPredicted RBP16.74■□□□□ 0.27
C9orf47-201ENST00000334490 MYZAPP0CAP1 466 aa16.74■□□□□ 0.27
C9orf47-201ENST00000334490 ZSWIM5Q9P217 1185 aa16.74■□□□□ 0.27
C9orf47-201ENST00000334490 KCNG1Q9UIX4 513 aa16.74■□□□□ 0.27
C9orf47-201ENST00000334490 NOLC1Q14978 699 aaKnown RBP eCLIP16.73■□□□□ 0.27
C9orf47-201ENST00000334490 GPBP1Q86WP2 473 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 CCDC50Q8IVM0 306 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 SLFN12Q8IYM2 578 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 DEPTORQ8TB45 409 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 RNF26Q9BY78 433 aaPredicted RBP16.73■□□□□ 0.27
C9orf47-201ENST00000334490 SETBP1Q9Y6X0 1596 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 CTAGE15A4D2H0 777 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 CTAGE8P0CG41 777 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 SLC8A3P57103 927 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 XKR9Q5GH70 373 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 CTAGE6Q86UF2 777 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 CTAGE4Q8IX94 777 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 PI4K2BQ8TCG2 481 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 PAXBP1Q9Y5B6 917 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 KIFAP3Q92845 792 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 ATP6V0A2Q9Y487 856 aa16.73■□□□□ 0.27
C9orf47-201ENST00000334490 PFKFB1P16118 471 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 NLRP12P59046 1061 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 TRIM28Q13263 835 aaKnown RBP16.72■□□□□ 0.27
C9orf47-201ENST00000334490 KRT26Q7Z3Y9 468 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 STRBPQ96SI9 672 aaKnown RBP16.72■□□□□ 0.27
C9orf47-201ENST00000334490 SOS2Q07890 1332 aaPredicted RBP16.72■□□□□ 0.27
C9orf47-201ENST00000334490 FSD2A1L4K1 749 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 AOC3Q16853 763 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 CCDC91Q7Z6B0 441 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 RDH13Q8NBN7 331 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 BRIP1Q9BX63 1249 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 TEKT3Q9BXF9 490 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 CTAGE9A4FU28 777 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 PSDA5PKW4 1024 aaPredicted RBP16.72■□□□□ 0.27
C9orf47-201ENST00000334490 TNFAIP3P21580 790 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 CDK8P49336 464 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 PTGDRQ13258 359 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 TBC1D10BQ4KMP7 808 aaPredicted RBP16.72■□□□□ 0.27
C9orf47-201ENST00000334490 USP17L2Q6R6M4 530 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.72■□□□□ 0.27
C9orf47-201ENST00000334490 SUGCTQ9HAC7 445 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 QRICH2Q9H0J4 1663 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 ECE2O60344 883 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 CRKP46108 304 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 IREB2P48200 963 aaKnown RBP16.72■□□□□ 0.27
C9orf47-201ENST00000334490 UBXN2AP68543 259 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 FANCCQ00597 558 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 FAM102BQ5T8I3 360 aa16.72■□□□□ 0.27
C9orf47-201ENST00000334490 VWA3BQ502W6 1294 aa16.71■□□□□ 0.27
C9orf47-201ENST00000334490 TDRD3Q9H7E2 651 aaKnown RBP16.71■□□□□ 0.27
C9orf47-201ENST00000334490 CYP2E1P05181 493 aaPredicted RBP16.71■□□□□ 0.27
C9orf47-201ENST00000334490 CYP4A11Q02928 519 aa16.71■□□□□ 0.27
C9orf47-201ENST00000334490 MAATS1Q7Z4T9 603 aa16.71■□□□□ 0.27
C9orf47-201ENST00000334490 NELFBQ8WX92 580 aa16.71■□□□□ 0.27
C9orf47-201ENST00000334490 BAG1Q99933 345 aaPredicted RBP16.71■□□□□ 0.27
C9orf47-201ENST00000334490 ZNF277Q9NRM2 450 aaPredicted RBP16.71■□□□□ 0.27
C9orf47-201ENST00000334490 TAB2Q9NYJ8 693 aa16.71■□□□□ 0.27
C9orf47-201ENST00000334490 INO80Q9ULG1 1556 aaPredicted RBP16.71■□□□□ 0.27
C9orf47-201ENST00000334490 MED14O60244 1454 aa16.71■□□□□ 0.27
C9orf47-201ENST00000334490 KRT19P08727 400 aa16.71■□□□□ 0.27
C9orf47-201ENST00000334490 OSBPP22059 807 aa16.71■□□□□ 0.27
C9orf47-201ENST00000334490 PNOCQ13519 176 aa16.71■□□□□ 0.27
C9orf47-201ENST00000334490 PIGSQ96S52 555 aa16.71■□□□□ 0.27
C9orf47-201ENST00000334490 GOLGA6L7A0A1B0GV03 622 aa16.71■□□□□ 0.26
C9orf47-201ENST00000334490 UTP14CQ5TAP6 766 aaKnown RBP16.71■□□□□ 0.26
C9orf47-201ENST00000334490 RASGRP4Q8TDF6 673 aa16.71■□□□□ 0.26
C9orf47-201ENST00000334490 PCDHB13Q9Y5F0 798 aa16.71■□□□□ 0.26
C9orf47-201ENST00000334490 IKBKGQ9Y6K9 419 aa16.71■□□□□ 0.26
C9orf47-201ENST00000334490 STAT2P52630 851 aa16.7■□□□□ 0.26
C9orf47-201ENST00000334490 TRMT44Q8IYL2 757 aaKnown RBP16.7■□□□□ 0.26
C9orf47-201ENST00000334490 SH3RF3Q8TEJ3 882 aaPredicted RBP16.7■□□□□ 0.26
C9orf47-201ENST00000334490 IWS1Q96ST2 819 aa16.7■□□□□ 0.26
C9orf47-201ENST00000334490 RGS12O14924 1447 aa16.7■□□□□ 0.26
C9orf47-201ENST00000334490 GSTA5Q7RTV2 222 aa16.7■□□□□ 0.26
C9orf47-201ENST00000334490 LRRC45Q96CN5 670 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms