RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CTR9Q6PD62 1173 aa13.96□□□□□ -0.17
VPS33B-201ENST00000333371 TRERF1Q96PN7 1200 aa13.96□□□□□ -0.17
VPS33B-201ENST00000333371 BTAF1O14981 1849 aa13.96□□□□□ -0.18
VPS33B-201ENST00000333371 CYP2C19P33261 490 aa13.95□□□□□ -0.18
VPS33B-201ENST00000333371 RASGRP4Q8TDF6 673 aa13.95□□□□□ -0.18
VPS33B-201ENST00000333371 GOLGA1Q92805 767 aa13.95□□□□□ -0.18
VPS33B-201ENST00000333371 SUGCTQ9HAC7 445 aa13.95□□□□□ -0.18
VPS33B-201ENST00000333371 ANAPC4Q9UJX5 808 aa13.95□□□□□ -0.18
VPS33B-201ENST00000333371 CCNL1Q9UK58 526 aaPredicted RBP13.95□□□□□ -0.18
VPS33B-201ENST00000333371 GDAQ9Y2T3 454 aa13.95□□□□□ -0.18
VPS33B-201ENST00000333371 CNTNAP5Q8WYK1 1306 aa13.95□□□□□ -0.18
VPS33B-201ENST00000333371 TMTC3Q6ZXV5 915 aa13.95□□□□□ -0.18
VPS33B-201ENST00000333371 SLC35F6Q8N357 371 aa13.95□□□□□ -0.18
VPS33B-201ENST00000333371 SETDB2Q96T68 719 aa13.95□□□□□ -0.18
VPS33B-201ENST00000333371 FUT8Q9BYC5 575 aa13.95□□□□□ -0.18
VPS33B-201ENST00000333371 GNL3LQ9NVN8 582 aaKnown RBP13.95□□□□□ -0.18
VPS33B-201ENST00000333371 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.95□□□□□ -0.18
VPS33B-201ENST00000333371 TFR2Q9UP52 801 aa13.95□□□□□ -0.18
VPS33B-201ENST00000333371 N4BP3O15049 544 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 CHMP4BP1P59074 171 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 SMC1AQ14683 1233 aaKnown RBP13.94□□□□□ -0.18
VPS33B-201ENST00000333371 E2F4Q16254 413 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 IQCA1Q86XH1 822 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 EEF2KMTQ96G04 330 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 GSDMAQ96QA5 445 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 PNKPQ96T60 521 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 NYXQ9GZU5 481 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 ARFGAP3Q9NP61 516 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 SRP68Q9UHB9 627 aaKnown RBP13.94□□□□□ -0.18
VPS33B-201ENST00000333371 A0A1B0GUL6 1792 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 TRIM49BA6NDI0 452 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 RPS6KA4O75676 772 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 ATP2C1P98194 919 aaPredicted RBP13.94□□□□□ -0.18
VPS33B-201ENST00000333371 SF3B3Q15393 1217 aaKnown RBP13.94□□□□□ -0.18
VPS33B-201ENST00000333371 WWC2Q6AWC2 1192 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 NBPF5PQ86XG9 351 aaPredicted RBP13.94□□□□□ -0.18
VPS33B-201ENST00000333371 CCDC24Q8N4L8 307 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 RABGGTAQ92696 567 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 FERMT2Q96AC1 680 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 PLIN2Q99541 437 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 ANKZF1Q9H8Y5 726 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 TRIM10Q9UDY6 481 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 NARFQ9UHQ1 456 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 MTMR7Q9Y216 660 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 CASZ1Q86V15 1759 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 TPM1P09493 284 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 TXLNAP40222 546 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 RCAN1P53805 252 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 NLRP5P59047 1200 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 LONRF2Q1L5Z9 754 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 KIF4BQ2VIQ3 1234 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 RC3H1Q5TC82 1133 aaKnown RBP13.94□□□□□ -0.18
VPS33B-201ENST00000333371 PDXDC2PQ6P474 469 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 GPKOWQ92917 476 aaPredicted RBP eCLIP13.94□□□□□ -0.18
VPS33B-201ENST00000333371 SLF1Q9BQI6 1058 aa13.94□□□□□ -0.18
VPS33B-201ENST00000333371 RTCBQ9Y3I0 505 aaKnown RBP13.94□□□□□ -0.18
VPS33B-201ENST00000333371 SCN7AQ01118 1682 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 ZNF804BA4D1E1 1349 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 SPATA31A6Q5VVP1 1343 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 PP2D1A8MPX8 630 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 H3BQF6 201 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 KIF5CO60282 957 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 RHOXF2BP0C7M4 288 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 FILIP1LQ4L180 1135 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 CAVIN4Q5BKX8 364 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 RASGRP2Q7LDG7 609 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 NUP88Q99567 741 aaPredicted RBP13.93□□□□□ -0.18
VPS33B-201ENST00000333371 RHOXF2Q9BQY4 288 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 MTA3Q9BTC8 594 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 UBXN6Q9BZV1 441 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 BSDC1Q9NW68 430 aaPredicted RBP13.93□□□□□ -0.18
VPS33B-201ENST00000333371 FAM205AQ6ZU69 1335 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 SRGAP1Q7Z6B7 1085 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 SLC51AQ86UW1 340 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 CELF1Q92879 486 aaKnown RBP13.93□□□□□ -0.18
VPS33B-201ENST00000333371 FAM84BQ96KN1 310 aaPredicted RBP13.93□□□□□ -0.18
VPS33B-201ENST00000333371 NLRP3Q96P20 1036 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 CHP1Q99653 195 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 BRMS1Q9HCU9 246 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 TFCP2L1Q9NZI6 479 aa13.93□□□□□ -0.18
VPS33B-201ENST00000333371 HNRNPH2P55795 449 aaKnown RBP13.92□□□□□ -0.18
VPS33B-201ENST00000333371 NELFBQ8WX92 580 aa13.92□□□□□ -0.18
VPS33B-201ENST00000333371 RGL2O15211 777 aa13.92□□□□□ -0.18
VPS33B-201ENST00000333371 COPB1P53618 953 aaKnown RBP13.92□□□□□ -0.18
VPS33B-201ENST00000333371 UBE4AQ14139 1066 aa13.92□□□□□ -0.18
VPS33B-201ENST00000333371 MCM6Q14566 821 aa13.92□□□□□ -0.18
VPS33B-201ENST00000333371 IQUBQ8NA54 791 aa13.92□□□□□ -0.18
VPS33B-201ENST00000333371 ABHD10Q9NUJ1 306 aa13.92□□□□□ -0.18
VPS33B-201ENST00000333371 CDC23Q9UJX2 597 aa13.92□□□□□ -0.18
VPS33B-201ENST00000333371 DLEC1Q9Y238 1755 aa13.91□□□□□ -0.18
VPS33B-201ENST00000333371 NHSQ6T4R5 1651 aa13.91□□□□□ -0.18
VPS33B-201ENST00000333371 SCG2P13521 617 aa13.91□□□□□ -0.18
VPS33B-201ENST00000333371 PRDX5P30044 214 aa13.91□□□□□ -0.18
VPS33B-201ENST00000333371 PRCPP42785 496 aa13.91□□□□□ -0.18
VPS33B-201ENST00000333371 PMS1P54277 932 aaKnown RBP13.91□□□□□ -0.18
VPS33B-201ENST00000333371 CTCFLQ8NI51 663 aaPredicted RBP13.91□□□□□ -0.18
VPS33B-201ENST00000333371 CTAGE1Q96RT6 745 aa13.91□□□□□ -0.18
VPS33B-201ENST00000333371 RBM28Q9NW13 759 aaKnown RBP13.91□□□□□ -0.18
VPS33B-201ENST00000333371 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
VPS33B-201ENST00000333371 MINPP1Q9UNW1 487 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms