RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 CERKQ8TCT0 537 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 GTPBP4Q9BZE4 634 aaKnown RBP12.19□□□□□ -0.46
CCDC172-201ENST00000333254 MAGEF1Q9HAY2 307 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 ADD3Q9UEY8 706 aaKnown RBP12.19□□□□□ -0.46
CCDC172-201ENST00000333254 SRP68Q9UHB9 627 aaKnown RBP12.19□□□□□ -0.46
CCDC172-201ENST00000333254 DDX41Q9UJV9 622 aaKnown RBP12.19□□□□□ -0.46
CCDC172-201ENST00000333254 PPP2R2CQ9Y2T4 447 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 NUTM2BA6NNL0 878 aaPredicted RBP12.19□□□□□ -0.46
CCDC172-201ENST00000333254 NUTM2EB1AL46 878 aaPredicted RBP12.19□□□□□ -0.46
CCDC172-201ENST00000333254 PRKCSHP14314 528 aaPredicted RBP12.19□□□□□ -0.46
CCDC172-201ENST00000333254 ATP2B1P20020 1258 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 TXLNAP40222 546 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 ZNF827Q17R98 1081 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 FILIP1LQ4L180 1135 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 GRAMD1CQ8IYS0 662 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 PNMA1Q8ND90 353 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 SAMSN1Q9NSI8 373 aaKnown RBP12.19□□□□□ -0.46
CCDC172-201ENST00000333254 MCM9Q9NXL9 1143 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 TFCP2L1Q9NZI6 479 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 LIMA1Q9UHB6 759 aaKnown RBP12.19□□□□□ -0.46
CCDC172-201ENST00000333254 RWDD2AQ9UIY3 292 aa12.19□□□□□ -0.46
CCDC172-201ENST00000333254 CCNL1Q9UK58 526 aaPredicted RBP12.19□□□□□ -0.46
CCDC172-201ENST00000333254 VWA3AA6NCI4 1184 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 WNT7AO00755 349 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 TPM1P09493 284 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 CYP2D6P10635 497 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 H2AFXP16104 143 aaPredicted RBP12.18□□□□□ -0.46
CCDC172-201ENST00000333254 PLCG2P16885 1265 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 TRIM14Q14142 442 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 KCNB1Q14721 858 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 ZNF174Q15697 407 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 UTP14CQ5TAP6 766 aaKnown RBP12.18□□□□□ -0.46
CCDC172-201ENST00000333254 ZNF658Q5TYW1 1059 aaPredicted RBP12.18□□□□□ -0.46
CCDC172-201ENST00000333254 HOMER1Q86YM7 354 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 ARHGEF1Q92888 912 aaKnown RBP12.18□□□□□ -0.46
CCDC172-201ENST00000333254 FAM163AQ96GL9 167 aaPredicted RBP12.18□□□□□ -0.46
CCDC172-201ENST00000333254 SPZ1Q9BXG8 430 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 CCSER1Q9C0I3 900 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 CUEDC2Q9H467 287 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 IL17RBQ9NRM6 502 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 FAM53CQ9NYF3 392 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 SNED1Q8TER0 1413 aa12.18□□□□□ -0.46
CCDC172-201ENST00000333254 PALM3A6NDB9 673 aaPredicted RBP12.17□□□□□ -0.46
CCDC172-201ENST00000333254 AKR1B15C9JRZ8 316 aaPredicted RBP12.17□□□□□ -0.46
CCDC172-201ENST00000333254 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
CCDC172-201ENST00000333254 NOVP48745 357 aa12.17□□□□□ -0.46
CCDC172-201ENST00000333254 TFAP4Q01664 338 aa12.17□□□□□ -0.46
CCDC172-201ENST00000333254 CRY2Q49AN0 593 aa12.17□□□□□ -0.46
CCDC172-201ENST00000333254 FAM47AQ5JRC9 791 aa12.17□□□□□ -0.46
CCDC172-201ENST00000333254 PIK3AP1Q6ZUJ8 805 aa12.17□□□□□ -0.46
CCDC172-201ENST00000333254 TXNRD3Q86VQ6 643 aa12.17□□□□□ -0.46
CCDC172-201ENST00000333254 TRMT44Q8IYL2 757 aaKnown RBP12.17□□□□□ -0.46
CCDC172-201ENST00000333254 MAD2L2Q9UI95 211 aa12.17□□□□□ -0.46
CCDC172-201ENST00000333254 GREB1LQ9C091 1923 aaPredicted RBP12.17□□□□□ -0.46
CCDC172-201ENST00000333254 PLIN4Q96Q06 1357 aa12.17□□□□□ -0.46
CCDC172-201ENST00000333254 hCG_1984214I3L0E3 225 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 NMT2O60551 498 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 USP17L8P0C7I0 530 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 IL1R1P14778 569 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 HOXA7P31268 230 aaPredicted RBP12.16□□□□□ -0.46
CCDC172-201ENST00000333254 AFMP43652 599 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 USP5P45974 858 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 FAM193AP78312 1265 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 CNGA4Q8IV77 575 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 ZNF713Q8N859 430 aaPredicted RBP12.16□□□□□ -0.46
CCDC172-201ENST00000333254 CCDC12Q8WUD4 166 aaPredicted RBP12.16□□□□□ -0.46
CCDC172-201ENST00000333254 AK8Q96MA6 479 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 BARHL2Q9NY43 387 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 TAOK2Q9UL54 1235 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 SPATA31A6Q5VVP1 1343 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 GPR75-ASB3A0A0A6YYF3 556 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 hCG_1642624A0A1W2PR95 340 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 EFCAB8A8MWE9 144 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 ATP2B4P23634 1241 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 TUBB2AQ13885 445 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 IL17AQ16552 155 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 NOM1Q5C9Z4 860 aaKnown RBP12.16□□□□□ -0.46
CCDC172-201ENST00000333254 SLF2Q8IX21 1173 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 ANKRD20A12PQ8NF67 263 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 TUBB2BQ9BVA1 445 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 RTFDC1Q9BY42 306 aaPredicted RBP12.16□□□□□ -0.46
CCDC172-201ENST00000333254 PARP3Q9Y6F1 533 aa12.16□□□□□ -0.46
CCDC172-201ENST00000333254 FAM205AQ6ZU69 1335 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 CCDC194A0A1B0GVG4 234 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 ESYT2A0FGR8 921 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 MFAP3LO75121 409 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 CCDC175P0C221 793 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 RASA1P20936 1047 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 PPP1R2P41236 205 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 EVX2Q03828 476 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 GABPB1Q06547 395 aaPredicted RBP12.15□□□□□ -0.46
CCDC172-201ENST00000333254 PAK1Q13153 545 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 ELF2Q15723 593 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 KMT5BQ4FZB7 885 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 TRAPPC3LQ5T215 181 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 C16orf86Q6ZW13 317 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 KRT25Q7Z3Z0 450 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 TMC4Q7Z404 712 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 PPFIBP1Q86W92 1011 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 IGSF22Q8N9C0 903 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms