RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 GSDMAQ96QA5 445 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 SAP30BPQ9UHR5 308 aaKnown RBP16.57■□□□□ 0.24
TPM3-206ENST00000330188 PCDHA4Q9UN74 947 aa16.57■□□□□ 0.24
TPM3-206ENST00000330188 IL1R1P14778 569 aa16.56■□□□□ 0.24
TPM3-206ENST00000330188 CD44P16070 742 aaKnown RBP16.56■□□□□ 0.24
TPM3-206ENST00000330188 GNAQP50148 359 aa16.56■□□□□ 0.24
TPM3-206ENST00000330188 ZNF444Q8N0Y2 327 aaPredicted RBP16.56■□□□□ 0.24
TPM3-206ENST00000330188 BCL11BQ9C0K0 894 aaPredicted RBP16.56■□□□□ 0.24
TPM3-206ENST00000330188 SNED1Q8TER0 1413 aa16.56■□□□□ 0.24
TPM3-206ENST00000330188 M0R2N6 131 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 ONECUT3O60422 494 aaPredicted RBP16.55■□□□□ 0.24
TPM3-206ENST00000330188 BTDP43251 543 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 ST5P78524 1137 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 TYW1BQ6NUM6 668 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 CERS3Q8IU89 383 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 TMEM139Q8IV31 216 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 C4orf32Q8N8J7 132 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 RBM17Q96I25 401 aaKnown RBP16.55■□□□□ 0.24
TPM3-206ENST00000330188 GGA1Q9UJY5 639 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 CYTH3O43739 400 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 SERPINB2P05120 415 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 ARL6IP4Q66PJ3 421 aaKnown RBP16.55■□□□□ 0.24
TPM3-206ENST00000330188 PDXDC2PQ6P474 469 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 IQUBQ8NA54 791 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 TMEM47Q9BQJ4 181 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 SYNRGQ9UMZ2 1314 aa16.55■□□□□ 0.24
TPM3-206ENST00000330188 MYH1P12882 1939 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 GPR75-ASB3A0A0A6YYF3 556 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 SPATA1Q5VX52 437 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 SPECC1LQ69YQ0 1117 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 SEPT12Q8IYM1 358 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 PDCL2Q8N4E4 241 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 RASGRP4Q8TDF6 673 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 A0A1B0GTH6 734 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 PALM3A6NDB9 673 aaPredicted RBP16.54■□□□□ 0.24
TPM3-206ENST00000330188 PPP1R3GB7ZBB8 358 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 CCP110O43303 1012 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 NAA30Q147X3 362 aaPredicted RBP16.54■□□□□ 0.24
TPM3-206ENST00000330188 NR1I3Q14994 352 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 WWC2Q6AWC2 1192 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 C16orf86Q6ZW13 317 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 APTXQ7Z2E3 356 aaKnown RBP16.54■□□□□ 0.24
TPM3-206ENST00000330188 TEX11Q8IYF3 940 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 DAGLBQ8NCG7 672 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 STAMQ92783 540 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 ARID3AQ99856 593 aa16.54■□□□□ 0.24
TPM3-206ENST00000330188 PYM1Q9BRP8 204 aaKnown RBP16.54■□□□□ 0.24
TPM3-206ENST00000330188 CCDC94Q9BW85 323 aaPredicted RBP16.54■□□□□ 0.24
TPM3-206ENST00000330188 LTBP1Q14766 1721 aa16.53■□□□□ 0.24
TPM3-206ENST00000330188 FOCADQ5VW36 1801 aa16.53■□□□□ 0.24
TPM3-206ENST00000330188 LONP1P36776 959 aaKnown RBP16.53■□□□□ 0.24
TPM3-206ENST00000330188 CDK8P49336 464 aa16.53■□□□□ 0.24
TPM3-206ENST00000330188 STX17P56962 302 aa16.53■□□□□ 0.24
TPM3-206ENST00000330188 GLIPR1L2Q4G1C9 344 aa16.53■□□□□ 0.24
TPM3-206ENST00000330188 MEX3CQ5U5Q3 659 aaKnown RBP16.53■□□□□ 0.24
TPM3-206ENST00000330188 KLHL10Q6JEL2 608 aa16.53■□□□□ 0.24
TPM3-206ENST00000330188 FCHSD1Q86WN1 690 aa16.53■□□□□ 0.24
TPM3-206ENST00000330188 PCDHA6Q9UN73 950 aa16.53■□□□□ 0.24
TPM3-206ENST00000330188 STX8Q9UNK0 236 aa16.53■□□□□ 0.24
TPM3-206ENST00000330188 PCDHA8Q9Y5H6 950 aa16.53■□□□□ 0.24
TPM3-206ENST00000330188 AFF2P51816 1311 aa16.53■□□□□ 0.24
TPM3-206ENST00000330188 LRRC37AA6NMS7 1700 aa16.53■□□□□ 0.24
TPM3-206ENST00000330188 STXBP3O00186 592 aa16.52■□□□□ 0.24
TPM3-206ENST00000330188 TUBB4AP04350 444 aa16.52■□□□□ 0.24
TPM3-206ENST00000330188 FLT1P17948 1338 aa16.52■□□□□ 0.24
TPM3-206ENST00000330188 RHBDL3P58872 404 aa16.52■□□□□ 0.24
TPM3-206ENST00000330188 SYT10Q6XYQ8 523 aa16.52■□□□□ 0.24
TPM3-206ENST00000330188 SMYD4Q8IYR2 804 aaPredicted RBP16.52■□□□□ 0.24
TPM3-206ENST00000330188 TC2NQ8N9U0 490 aa16.52■□□□□ 0.24
TPM3-206ENST00000330188 CCDC148Q8NFR7 591 aa16.52■□□□□ 0.24
TPM3-206ENST00000330188 MTRQ99707 1265 aa16.52■□□□□ 0.24
TPM3-206ENST00000330188 ZNF287Q9HBT7 754 aa16.52■□□□□ 0.24
TPM3-206ENST00000330188 BARHL2Q9NY43 387 aa16.52■□□□□ 0.24
TPM3-206ENST00000330188 PODXL2Q9NZ53 605 aa16.52■□□□□ 0.24
TPM3-206ENST00000330188 POLLQ9UGP5 575 aa16.52■□□□□ 0.24
TPM3-206ENST00000330188 MTMR7Q9Y216 660 aa16.52■□□□□ 0.24
TPM3-206ENST00000330188 ARHGAP6O43182 974 aa16.52■□□□□ 0.23
TPM3-206ENST00000330188 BBOX1O75936 387 aa16.52■□□□□ 0.23
TPM3-206ENST00000330188 CDKAL1Q5VV42 579 aa16.52■□□□□ 0.23
TPM3-206ENST00000330188 EYA3Q99504 573 aa16.52■□□□□ 0.23
TPM3-206ENST00000330188 BLZF1Q9H2G9 400 aa16.52■□□□□ 0.23
TPM3-206ENST00000330188 ZNF215Q9UL58 517 aaPredicted RBP16.52■□□□□ 0.23
TPM3-206ENST00000330188 CCDC194A0A1B0GVG4 234 aa16.51■□□□□ 0.23
TPM3-206ENST00000330188 GTPBP6O43824 516 aaPredicted RBP16.51■□□□□ 0.23
TPM3-206ENST00000330188 PLCG2P16885 1265 aa16.51■□□□□ 0.23
TPM3-206ENST00000330188 MFSD14BQ5SR56 506 aa16.51■□□□□ 0.23
TPM3-206ENST00000330188 GALNT17Q6IS24 598 aa16.51■□□□□ 0.23
TPM3-206ENST00000330188 HEATR3Q7Z4Q2 680 aa16.51■□□□□ 0.23
TPM3-206ENST00000330188 REXO1L1PQ8IX06 675 aa16.51■□□□□ 0.23
TPM3-206ENST00000330188 NEDD1Q8NHV4 660 aa16.51■□□□□ 0.23
TPM3-206ENST00000330188 TBC1D16Q8TBP0 767 aa16.51■□□□□ 0.23
TPM3-206ENST00000330188 FAM163AQ96GL9 167 aaPredicted RBP16.51■□□□□ 0.23
TPM3-206ENST00000330188 LZTS2Q9BRK4 669 aa16.51■□□□□ 0.23
TPM3-206ENST00000330188 GAKO14976 1311 aa16.51■□□□□ 0.23
TPM3-206ENST00000330188 HOXA10P31260 410 aaPredicted RBP16.51■□□□□ 0.23
TPM3-206ENST00000330188 RASGRP2Q7LDG7 609 aa16.51■□□□□ 0.23
TPM3-206ENST00000330188 BAG1Q99933 345 aaPredicted RBP16.51■□□□□ 0.23
TPM3-206ENST00000330188 L2HGDHQ9H9P8 463 aa16.51■□□□□ 0.23
TPM3-206ENST00000330188 TEX33O43247 280 aa16.5■□□□□ 0.23
TPM3-206ENST00000330188 STX10O60499 249 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms