RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 PRPF3O43395 683 aaKnown RBP22.44■■□□□ 1.18
CRLF3-201ENST00000324238 PMS1P54277 932 aaKnown RBP22.44■■□□□ 1.18
CRLF3-201ENST00000324238 GSDMAQ96QA5 445 aa22.44■■□□□ 1.18
CRLF3-201ENST00000324238 LRP6O75581 1613 aa22.44■■□□□ 1.18
CRLF3-201ENST00000324238 ZMYND10O75800 440 aa22.43■■□□□ 1.18
CRLF3-201ENST00000324238 PRDX5P30044 214 aa22.43■■□□□ 1.18
CRLF3-201ENST00000324238 SKIDA1Q1XH10 827 aa22.43■■□□□ 1.18
CRLF3-201ENST00000324238 JAKMIP3Q5VZ66 844 aa22.43■■□□□ 1.18
CRLF3-201ENST00000324238 UBXN6Q9BZV1 441 aa22.43■■□□□ 1.18
CRLF3-201ENST00000324238 ADAM21Q9UKJ8 722 aa22.43■■□□□ 1.18
CRLF3-201ENST00000324238 PLEKHG2Q9H7P9 1386 aa22.43■■□□□ 1.18
CRLF3-201ENST00000324238 COL4A1P02462 1669 aa22.43■■□□□ 1.18
CRLF3-201ENST00000324238 PRCPP42785 496 aa22.43■■□□□ 1.18
CRLF3-201ENST00000324238 COPB1P53618 953 aaKnown RBP22.43■■□□□ 1.18
CRLF3-201ENST00000324238 RASGRP2Q7LDG7 609 aa22.43■■□□□ 1.18
CRLF3-201ENST00000324238 ABHD10Q9NUJ1 306 aa22.43■■□□□ 1.18
CRLF3-201ENST00000324238 VGLL3A8MV65 326 aa22.42■■□□□ 1.18
CRLF3-201ENST00000324238 KCNJ18B7U540 433 aa22.42■■□□□ 1.18
CRLF3-201ENST00000324238 KCNJ12Q14500 433 aa22.42■■□□□ 1.18
CRLF3-201ENST00000324238 CPVLQ9H3G5 476 aa22.42■■□□□ 1.18
CRLF3-201ENST00000324238 CAVIN4Q5BKX8 364 aa22.42■■□□□ 1.18
CRLF3-201ENST00000324238 TMTC3Q6ZXV5 915 aa22.42■■□□□ 1.18
CRLF3-201ENST00000324238 IQUBQ8NA54 791 aa22.42■■□□□ 1.18
CRLF3-201ENST00000324238 TNFRSF25Q93038 417 aa22.42■■□□□ 1.18
CRLF3-201ENST00000324238 FAM84BQ96KN1 310 aaPredicted RBP22.42■■□□□ 1.18
CRLF3-201ENST00000324238 CAPZA3Q96KX2 299 aa22.42■■□□□ 1.18
CRLF3-201ENST00000324238 GPR101Q96P66 508 aaPredicted RBP22.42■■□□□ 1.18
CRLF3-201ENST00000324238 MINPP1Q9UNW1 487 aa22.42■■□□□ 1.18
CRLF3-201ENST00000324238 BAZ2AQ9UIF9 1905 aaKnown RBP22.42■■□□□ 1.18
CRLF3-201ENST00000324238 ERCC3P19447 782 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 PIP4K2BP78356 416 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 TXNRD3Q86VQ6 643 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 BRMS1Q9HCU9 246 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 CALCOCO1Q9P1Z2 691 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 MYH8P13535 1937 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 RTL9Q8NET4 1388 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 CAPN2P17655 700 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 ARHGAP25P42331 645 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 PAK1Q13153 545 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 E2F4Q16254 413 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 BEND6Q5SZJ8 279 aaPredicted RBP22.41■■□□□ 1.18
CRLF3-201ENST00000324238 FERMT2Q96AC1 680 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 FAM205AQ6ZU69 1335 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 PAPPAQ13219 1627 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 PDXDC2PQ6P474 469 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 CTCFLQ8NI51 663 aaPredicted RBP22.41■■□□□ 1.18
CRLF3-201ENST00000324238 CHD4Q14839 1912 aa22.41■■□□□ 1.18
CRLF3-201ENST00000324238 NUP98P52948 1817 aa22.4■■□□□ 1.18
CRLF3-201ENST00000324238 KLK7P49862 253 aa22.4■■□□□ 1.18
CRLF3-201ENST00000324238 ATP2C1P98194 919 aaPredicted RBP22.4■■□□□ 1.18
CRLF3-201ENST00000324238 FAM98CQ17RN3 349 aaKnown RBP22.4■■□□□ 1.18
CRLF3-201ENST00000324238 TAF3Q5VWG9 929 aa22.4■■□□□ 1.18
CRLF3-201ENST00000324238 CNGA4Q8IV77 575 aa22.4■■□□□ 1.18
CRLF3-201ENST00000324238 STAG2Q8N3U4 1231 aa22.4■■□□□ 1.18
CRLF3-201ENST00000324238 GNL3LQ9NVN8 582 aaKnown RBP22.4■■□□□ 1.18
CRLF3-201ENST00000324238 TAF1P21675 1872 aa22.4■■□□□ 1.18
CRLF3-201ENST00000324238 ITGB4P16144 1822 aa22.4■■□□□ 1.18
CRLF3-201ENST00000324238 CNTNAP5Q8WYK1 1306 aa22.4■■□□□ 1.18
CRLF3-201ENST00000324238 KDM4FA0A1W2PPD8 638 aa22.4■■□□□ 1.18
CRLF3-201ENST00000324238 NKRFO15226 690 aaKnown RBP eCLIP22.4■■□□□ 1.18
CRLF3-201ENST00000324238 TCP11X2Q5H9J9 407 aa22.4■■□□□ 1.18
CRLF3-201ENST00000324238 CTAGE1Q96RT6 745 aa22.4■■□□□ 1.18
CRLF3-201ENST00000324238 TTC26A0AVF1 554 aa22.39■■□□□ 1.18
CRLF3-201ENST00000324238 TBC1D9BQ66K14 1250 aa22.39■■□□□ 1.18
CRLF3-201ENST00000324238 REXO2Q9Y3B8 237 aaKnown RBP22.39■■□□□ 1.18
CRLF3-201ENST00000324238 COL1A1P02452 1464 aaPredicted RBP22.39■■□□□ 1.17
CRLF3-201ENST00000324238 CCDC151A5D8V7 595 aa22.39■■□□□ 1.17
CRLF3-201ENST00000324238 RPN1P04843 607 aaKnown RBP22.39■■□□□ 1.17
CRLF3-201ENST00000324238 MRPS25P82663 173 aaKnown RBP22.39■■□□□ 1.17
CRLF3-201ENST00000324238 PARP10Q53GL7 1025 aa22.39■■□□□ 1.17
CRLF3-201ENST00000324238 CCDC102AQ96A19 550 aa22.39■■□□□ 1.17
CRLF3-201ENST00000324238 NAPGQ99747 312 aaPredicted RBP22.39■■□□□ 1.17
CRLF3-201ENST00000324238 MECOMQ03112 1051 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 LCMT1Q9UIC8 334 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 FAN1Q9Y2M0 1017 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 MYH3P11055 1940 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 NID2Q14112 1375 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 TYW1BQ6NUM6 668 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 IRF2BP1Q8IU81 584 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 DYNLL2Q96FJ2 89 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 MYH6P13533 1939 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 TSPY2A6NKD2 308 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 USP17L8P0C7I0 530 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 SCG2P13521 617 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 STAT6P42226 847 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 LINC00116Q8NCU8 138 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 TMEM60Q9H2L4 133 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 PLEKHA4Q9H4M7 779 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 TMEM51Q9NW97 253 aa22.38■■□□□ 1.17
CRLF3-201ENST00000324238 HPS3Q969F9 1004 aa22.37■■□□□ 1.17
CRLF3-201ENST00000324238 EP400Q96L91 3159 aa22.37■■□□□ 1.17
CRLF3-201ENST00000324238 CTAGE15A4D2H0 777 aa22.37■■□□□ 1.17
CRLF3-201ENST00000324238 CTAGE8P0CG41 777 aa22.37■■□□□ 1.17
CRLF3-201ENST00000324238 RAD51AP2Q09MP3 1159 aa22.37■■□□□ 1.17
CRLF3-201ENST00000324238 ZSCAN26Q16670 478 aa22.37■■□□□ 1.17
CRLF3-201ENST00000324238 CTAGE6Q86UF2 777 aa22.37■■□□□ 1.17
CRLF3-201ENST00000324238 CTAGE4Q8IX94 777 aa22.37■■□□□ 1.17
CRLF3-201ENST00000324238 GSPT2Q8IYD1 628 aaKnown RBP22.37■■□□□ 1.17
CRLF3-201ENST00000324238 DUSP10Q9Y6W6 482 aa22.37■■□□□ 1.17
CRLF3-201ENST00000324238 PARP1P09874 1014 aaKnown RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms