RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 AFAP1Q8N556 730 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 CSGALNACT2Q8N6G5 542 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 EMILIN1Q9Y6C2 1016 aa7.78□□□□□ -1.16
SMC1A-201ENST00000322213 EPN1Q9Y6I3 576 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 CDK12Q9NYV4 1490 aaPredicted RBP7.78□□□□□ -1.16
SMC1A-201ENST00000322213 NPATQ14207 1427 aa7.77□□□□□ -1.16
SMC1A-201ENST00000322213 KRIT1O00522 736 aa7.77□□□□□ -1.16
SMC1A-201ENST00000322213 IGHMBP2P38935 993 aaKnown RBP7.77□□□□□ -1.16
SMC1A-201ENST00000322213 GUCY2DQ02846 1103 aa7.77□□□□□ -1.16
SMC1A-201ENST00000322213 EPN3Q9H201 632 aa7.77□□□□□ -1.16
SMC1A-201ENST00000322213 KCNF1Q9H3M0 494 aa7.77□□□□□ -1.16
SMC1A-201ENST00000322213 TYW1Q9NV66 732 aaKnown RBP7.77□□□□□ -1.16
SMC1A-201ENST00000322213 ASXL2Q76L83 1435 aa7.77□□□□□ -1.16
SMC1A-201ENST00000322213 ALDH1L1O75891 902 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 CMA1P23946 247 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 ABCB6Q9NP58 842 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 CDC42BPGQ6DT37 1551 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 OTOFQ9HC10 1997 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 MED14O60244 1454 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 DEXIO95424 95 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 STMN1P16949 149 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 RAPGEF1Q13905 1077 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 ARHGEF25Q86VW2 580 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 KLHDC4Q8TBB5 520 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 NUDT16Q96DE0 195 aaKnown RBP7.77□□□□□ -1.17
SMC1A-201ENST00000322213 FGD4Q96M96 766 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 MYD88Q99836 296 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 TATP17735 454 aaPredicted RBP7.77□□□□□ -1.17
SMC1A-201ENST00000322213 TYW1BQ6NUM6 668 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 RNF217Q8TC41 542 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 GFM2Q969S9 779 aaKnown RBP7.77□□□□□ -1.17
SMC1A-201ENST00000322213 FANCLQ9NW38 375 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 RTEL1Q9NZ71 1219 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 RNF14Q9UBS8 474 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 MYO9BQ13459 2157 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 TMEM110-MUSTN1A8MSY1 372 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 TXNDC9O14530 226 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 ZFXP17010 805 aaPredicted RBP7.77□□□□□ -1.17
SMC1A-201ENST00000322213 LAMB3Q13751 1172 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 GLE1Q53GS7 698 aaKnown RBP7.77□□□□□ -1.17
SMC1A-201ENST00000322213 SLC35F6Q8N357 371 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 USP5P45974 858 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 DPCR1Q3MIW9 517 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 ANKRD20A3Q5VUR7 823 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 SDCCAG8Q86SQ7 713 aaPredicted RBP7.77□□□□□ -1.17
SMC1A-201ENST00000322213 KIF2CQ99661 725 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 OSBPL1AQ9BXW6 950 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 PFKFB2O60825 505 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 DNM2P50570 870 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 C19orf44Q9H6X5 657 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 KAT14Q9H8E8 782 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 FRMD4BQ9Y2L6 1034 aa7.77□□□□□ -1.17
SMC1A-201ENST00000322213 RNASE9P60153 205 aaKnown RBP7.76□□□□□ -1.17
SMC1A-201ENST00000322213 HHATQ5VTY9 493 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 EPSTI1Q96J88 318 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 OLFM3Q96PB7 478 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 INO80Q9ULG1 1556 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-201ENST00000322213 CHST3Q7LGC8 479 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 RGPD8O14715 1765 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-201ENST00000322213 GNA14O95837 355 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 POLE2P56282 527 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 RETREG2Q8NC44 543 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 ST7Q9NRC1 585 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 INTS9Q9NV88 658 aaKnown RBP7.76□□□□□ -1.17
SMC1A-201ENST00000322213 HECW2Q9P2P5 1572 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 AKAP11Q9UKA4 1901 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 SOWAHDA6NJG2 315 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 OSBPL3Q9H4L5 887 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 C14orf93Q9H972 538 aaKnown RBP7.76□□□□□ -1.17
SMC1A-201ENST00000322213 RMI1Q9H9A7 625 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 MKNK2Q9HBH9 465 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 PCDHA7Q9UN72 937 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 EPB41P11171 864 aaKnown RBP7.76□□□□□ -1.17
SMC1A-201ENST00000322213 WDR78Q5VTH9 848 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 TTC6Q86TZ1 520 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 EHMT1Q9H9B1 1298 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 RNF113AO15541 343 aaKnown RBP7.76□□□□□ -1.17
SMC1A-201ENST00000322213 GAS8O95995 478 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 SEMA3FQ13275 785 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 ARMCX6Q7L4S7 300 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 RANBP1P43487 201 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 PPP1R21Q6ZMI0 780 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 DHX40Q8IX18 779 aaKnown RBP7.76□□□□□ -1.17
SMC1A-201ENST00000322213 KLHL7Q8IXQ5 586 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 HAUS1Q96CS2 278 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 ADGRL3Q9HAR2 1447 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 PHBP35232 272 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 TPD52P55327 224 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-201ENST00000322213 INF2Q27J81 1249 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 CAVIN4Q5BKX8 364 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 KIFAP3Q92845 792 aa7.76□□□□□ -1.17
SMC1A-201ENST00000322213 HGSO14964 777 aaPredicted RBP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 JAK2O60674 1132 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 RNF8O76064 485 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 RPL13P26373 211 aaKnown RBP7.75□□□□□ -1.17
SMC1A-201ENST00000322213 IL9RQ01113 521 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 BICD1Q96G01 975 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 DRC3Q9H069 523 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 CCDC68Q9H2F9 335 aa7.75□□□□□ -1.17
SMC1A-201ENST00000322213 TPCN1Q9ULQ1 816 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms