RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 APOBEC3HQ6NTF7 200 aaKnown RBP3.9□□□□□ -1.78
SCAMP1-201ENST00000320280 MAGEB6Q8N7X4 407 aa3.9□□□□□ -1.78
SCAMP1-201ENST00000320280 SMC1BQ8NDV3 1235 aa3.9□□□□□ -1.78
SCAMP1-201ENST00000320280 EPS8L1Q8TE68 723 aa3.9□□□□□ -1.78
SCAMP1-201ENST00000320280 TTC14Q96N46 770 aa3.9□□□□□ -1.78
SCAMP1-201ENST00000320280 PI4KBQ9UBF8 816 aa3.9□□□□□ -1.78
SCAMP1-201ENST00000320280 ZNF70Q9UC06 446 aaPredicted RBP3.9□□□□□ -1.78
SCAMP1-201ENST00000320280 PLA2G6O60733 806 aa3.9□□□□□ -1.79
SCAMP1-201ENST00000320280 KLRK1P26718 216 aa3.9□□□□□ -1.79
SCAMP1-201ENST00000320280 PRELPP51888 382 aa3.9□□□□□ -1.79
SCAMP1-201ENST00000320280 ANKRD1Q15327 319 aa3.9□□□□□ -1.79
SCAMP1-201ENST00000320280 C16orf86Q6ZW13 317 aa3.9□□□□□ -1.79
SCAMP1-201ENST00000320280 CDC37L1Q7L3B6 337 aa3.9□□□□□ -1.79
SCAMP1-201ENST00000320280 TEX11Q8IYF3 940 aa3.9□□□□□ -1.79
SCAMP1-201ENST00000320280 SAMD3Q8N6K7 520 aa3.9□□□□□ -1.79
SCAMP1-201ENST00000320280 DCPSQ96C86 337 aaKnown RBP3.9□□□□□ -1.79
SCAMP1-201ENST00000320280 ZNF341Q9BYN7 854 aa3.9□□□□□ -1.79
SCAMP1-201ENST00000320280 FLT1P17948 1338 aa3.9□□□□□ -1.79
SCAMP1-201ENST00000320280 MYPNQ86TC9 1320 aa3.9□□□□□ -1.79
SCAMP1-201ENST00000320280 IDH1O75874 414 aaKnown RBP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 ZKSCAN1P17029 563 aaPredicted RBP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 HSPA4P34932 840 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 GABPAQ06546 454 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 NMIQ13287 307 aaPredicted RBP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 TATDN1Q6P1N9 297 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 TBC1D9Q6ZT07 1266 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 TMEM87BQ96K49 555 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 LSG1Q9H089 658 aaKnown RBP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 CNTNAP1P78357 1384 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 VARSP26640 1264 aaKnown RBP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 PRDX5P30044 214 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 COPB2P35606 906 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 IRX6P78412 446 aaPredicted RBP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 CHAF1AQ13111 956 aaPredicted RBP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 C12orf60Q5U649 245 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 CDC42EP5Q6NZY7 148 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 AS3MTQ9HBK9 375 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 WWC3Q9ULE0 1092 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 POLR2AP24928 1970 aaKnown RBP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 WNT10BO00744 389 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 WDHD1O75717 1129 aaPredicted RBP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 CALM1P0DP23 149 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 CALM2P0DP24 149 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 CALM3P0DP25 149 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 HSPD1P10809 573 aaKnown RBP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 NECTIN1Q15223 517 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 ARMC9Q7Z3E5 817 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 C16orf71Q8IYS4 520 aaPredicted RBP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 IFNL3Q8IZI9 196 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 RILPL2Q969X0 211 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 SLC10A4Q96EP9 437 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 NAPBQ9H115 298 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 DCP1AQ9NPI6 582 aaPredicted RBP3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 ABCF2Q9UG63 623 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 PASKQ96RG2 1323 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 MYH6P13533 1939 aa3.89□□□□□ -1.79
SCAMP1-201ENST00000320280 GSG1L2A8MUP6 293 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 hCG_1984214I3L0E3 225 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 CTNND1O60716 968 aaKnown RBP3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 MBD4O95243 580 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 USP5P45974 858 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 IREB2P48200 963 aaKnown RBP3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 USP14P54578 494 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 EVCP57679 992 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 SART3Q15020 963 aaKnown RBP3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 RABEP1Q15276 862 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 DIXDC1Q155Q3 683 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 C8orf34Q49A92 452 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 NOM1Q5C9Z4 860 aaKnown RBP3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 LCE2CQ5TA81 110 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 LYPD8Q6UX82 237 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 CRIPAKQ8N1N5 446 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 ZNF713Q8N859 430 aaPredicted RBP3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 ZNF384Q8TF68 577 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 OSBP2Q969R2 916 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 C12orf42Q96LP6 360 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 LZTS2Q9BRK4 669 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 ARHGAP9Q9BRR9 750 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 WDR18Q9BV38 432 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 CFHR5Q9BXR6 569 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 AGXT2Q9BYV1 514 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 BACH2Q9BYV9 841 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 USP40Q9NVE5 1235 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 SLC4A4Q9Y6R1 1079 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 CASP8AP2Q9UKL3 1982 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 RAD17O75943 681 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 TOMM70O94826 608 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 ZBTB48P10074 688 aaPredicted RBP3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 LIFRP42702 1097 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 TRDNQ13061 729 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 MCTP2Q6DN12 878 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 TMEM179Q6ZVK1 233 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 DGKHQ86XP1 1220 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 LINC00528Q8N1L1 170 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 NCOA7Q8NI08 942 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 OTUD7AQ8TE49 926 aaPredicted RBP3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 ESR2Q92731 530 aa3.88□□□□□ -1.79
SCAMP1-201ENST00000320280 IRF7Q92985 503 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms