RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 USP21Q9UK80 565 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 PCOLCE2Q9UKZ9 415 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 CEP131Q9UPN4 1083 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 CNTNAP5Q8WYK1 1306 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.63□□□□□ -1.51
SMCO3-201ENST00000316048 SDSP20132 328 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 CDKN1CP49918 316 aaPredicted RBP5.63□□□□□ -1.51
SMCO3-201ENST00000316048 C7orf61Q8IZ16 206 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 TMEM130Q8N3G9 435 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 SYNPOQ8N3V7 929 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 MFSD2AQ8NA29 543 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 SMARCC1Q92922 1105 aaPredicted RBP5.63□□□□□ -1.51
SMCO3-201ENST00000316048 ENAMQ9NRM1 1142 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 MKL2Q9ULH7 1088 aa5.63□□□□□ -1.51
SMCO3-201ENST00000316048 GAS2O43903 313 aaKnown RBP5.62□□□□□ -1.51
SMCO3-201ENST00000316048 MARCH6O60337 910 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 PDE8AO60658 829 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 PABPC1P11940 636 aaKnown RBP5.62□□□□□ -1.51
SMCO3-201ENST00000316048 NOS3P29474 1203 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 CNGA1P29973 690 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 USP11P51784 963 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 ZNF445P59923 1031 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 HSP90AA2PQ14568 343 aaPredicted RBP5.62□□□□□ -1.51
SMCO3-201ENST00000316048 PPP2R5DQ14738 602 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 BVESQ8NE79 360 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 MRGPRX3Q96LB0 322 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 NOL6Q9H6R4 1146 aaKnown RBP5.62□□□□□ -1.51
SMCO3-201ENST00000316048 DDX56Q9NY93 547 aaKnown RBP5.62□□□□□ -1.51
SMCO3-201ENST00000316048 CGGBP1Q9UFW8 167 aaPredicted RBP5.62□□□□□ -1.51
SMCO3-201ENST00000316048 FAM83GA6ND36 823 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 C6orf222P0C671 652 aaPredicted RBP5.62□□□□□ -1.51
SMCO3-201ENST00000316048 COL8A1P27658 744 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 IREB2P48200 963 aaKnown RBP5.62□□□□□ -1.51
SMCO3-201ENST00000316048 PRSS53Q2L4Q9 553 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 PLEKHG6Q3KR16 790 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 Q6ZS46 218 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 TARS2Q9BW92 718 aaKnown RBP5.62□□□□□ -1.51
SMCO3-201ENST00000316048 GBP3Q9H0R5 595 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 WHRNQ9P202 907 aa5.62□□□□□ -1.51
SMCO3-201ENST00000316048 SART1O43290 800 aaKnown RBP5.61□□□□□ -1.51
SMCO3-201ENST00000316048 LEFTY1O75610 366 aa5.61□□□□□ -1.51
SMCO3-201ENST00000316048 KCNH1O95259 989 aa5.61□□□□□ -1.51
SMCO3-201ENST00000316048 NAT2P11245 290 aa5.61□□□□□ -1.51
SMCO3-201ENST00000316048 STAT3P40763 770 aa5.61□□□□□ -1.51
SMCO3-201ENST00000316048 PRRT3Q5FWE3 981 aa5.61□□□□□ -1.51
SMCO3-201ENST00000316048 NSMFQ6X4W1 530 aa5.61□□□□□ -1.51
SMCO3-201ENST00000316048 TMC3Q7Z5M5 1100 aa5.61□□□□□ -1.51
SMCO3-201ENST00000316048 TRIM59Q8IWR1 403 aa5.61□□□□□ -1.51
SMCO3-201ENST00000316048 TOP6BLQ8N6T0 577 aa5.61□□□□□ -1.51
SMCO3-201ENST00000316048 FAM46AQ96IP4 442 aaKnown RBP5.61□□□□□ -1.51
SMCO3-201ENST00000316048 PRDM14Q9GZV8 571 aa5.61□□□□□ -1.51
SMCO3-201ENST00000316048 FBXL21Q9UKT6 434 aa5.61□□□□□ -1.51
SMCO3-201ENST00000316048 AKT3Q9Y243 479 aa5.61□□□□□ -1.51
SMCO3-201ENST00000316048 EMC9Q9Y3B6 208 aa5.61□□□□□ -1.51
SMCO3-201ENST00000316048 TOP2AP11388 1531 aaKnown RBP5.61□□□□□ -1.51
SMCO3-201ENST00000316048 MEIS1O00470 390 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 PLD2O14939 933 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 PPM1BO75688 479 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
SMCO3-201ENST00000316048 NBPF9Q3BBW0 867 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 ANKRD39Q53RE8 183 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 SEZ6L2Q6UXD5 910 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.6□□□□□ -1.51
SMCO3-201ENST00000316048 KRT26Q7Z3Y9 468 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 RNF180Q86T96 592 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 PRPF38AQ8NAV1 312 aaKnown RBP5.6□□□□□ -1.51
SMCO3-201ENST00000316048 SLC7A14Q8TBB6 771 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 PRDM10Q9NQV6 1147 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 C1GALT1Q9NS00 363 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 GFOD1Q9NXC2 390 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 DLX3O60479 287 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 EOMESO95936 686 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 FGFR1P11362 822 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 ITGA4P13612 1032 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 CYP4F3Q08477 520 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 TAF7LQ5H9L4 462 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 CNNM4Q6P4Q7 775 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 FGD2Q7Z6J4 655 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 ARMC10Q8N2F6 343 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 RNF141Q8WVD5 230 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 LENG1Q96BZ8 264 aaPredicted RBP5.6□□□□□ -1.51
SMCO3-201ENST00000316048 MEGF10Q96KG7 1140 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 ZDHHC15Q96MV8 337 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 SLC52A2Q9HAB3 445 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 PCDHB12Q9Y5F1 795 aa5.6□□□□□ -1.51
SMCO3-201ENST00000316048 GSG1L2A8MUP6 293 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 VAMP4O75379 141 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 DNAJC8O75937 253 aaPredicted RBP5.59□□□□□ -1.51
SMCO3-201ENST00000316048 PARNO95453 639 aaKnown RBP5.59□□□□□ -1.51
SMCO3-201ENST00000316048 BMP3P12645 472 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 RXRBP28702 533 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 ZNF460Q14592 562 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 NTRK3Q16288 839 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 ZC3H12BQ5HYM0 836 aaKnown RBP5.59□□□□□ -1.51
SMCO3-201ENST00000316048 GTF2IRD2BQ6EKJ0 949 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 BRAPQ7Z569 592 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 GTF2IRD2Q86UP8 949 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 SCUBE1Q8IWY4 988 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 ARHGEF39Q8N4T4 335 aa5.59□□□□□ -1.51
SMCO3-201ENST00000316048 FIBCD1Q8N539 461 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms