RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 STX10O60499 249 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 ZNF18P17022 549 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 EZH2Q15910 746 aaKnown RBP16.95■□□□□ 0.3
CHFR-202ENST00000315585 TTC38Q5R3I4 469 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 MSL1Q68DK7 614 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 SLC51AQ86UW1 340 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 DGKHQ86XP1 1220 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 C2CD5Q86YS7 1000 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 IQUBQ8NA54 791 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 ZNF622Q969S3 477 aaKnown RBP eCLIP16.95■□□□□ 0.39e-9■■□□□ 12.7
CHFR-202ENST00000315585 GPR75-ASB3A0A0A6YYF3 556 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 SCG2P13521 617 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 NLRP5P59047 1200 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 ETF1P62495 437 aaKnown RBP16.95■□□□□ 0.3
CHFR-202ENST00000315585 PDILTQ8N807 584 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 L2HGDHQ9H9P8 463 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 PHLPP2Q6ZVD8 1323 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 CYP2D7A0A087X1C5 515 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 BMP6P22004 513 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 EN1Q05925 392 aaPredicted RBP16.94■□□□□ 0.3
CHFR-202ENST00000315585 DIXDC1Q155Q3 683 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 FILIP1LQ4L180 1135 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 C12orf60Q5U649 245 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 SH3RF3Q8TEJ3 882 aaPredicted RBP16.94■□□□□ 0.3
CHFR-202ENST00000315585 CNKSR1Q969H4 720 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
CHFR-202ENST00000315585 PRDM1O75626 825 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 TXLNAP40222 546 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 BTDP43251 543 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 ATP2C1P98194 919 aaPredicted RBP16.94■□□□□ 0.3
CHFR-202ENST00000315585 GRIN1Q05586 938 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 PFKFB3Q16875 520 aaPredicted RBP16.94■□□□□ 0.3
CHFR-202ENST00000315585 SPATA1Q5VX52 437 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 ARL6IP4Q66PJ3 421 aaKnown RBP16.94■□□□□ 0.3
CHFR-202ENST00000315585 DHX58Q96C10 678 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 KAT14Q9H8E8 782 aa16.94■□□□□ 0.3
CHFR-202ENST00000315585 MKRN1Q9UHC7 482 aaKnown RBP16.94■□□□□ 0.3
CHFR-202ENST00000315585 RIMBP2O15034 1052 aa16.93■□□□□ 0.3
CHFR-202ENST00000315585 PLEKHA8P1O95397 391 aa16.93■□□□□ 0.3
CHFR-202ENST00000315585 BAG6P46379 1132 aa16.93■□□□□ 0.3
CHFR-202ENST00000315585 GALNT17Q6IS24 598 aa16.93■□□□□ 0.3
CHFR-202ENST00000315585 SH3RF1Q7Z6J0 888 aa16.93■□□□□ 0.3
CHFR-202ENST00000315585 BAG1Q99933 345 aaPredicted RBP16.93■□□□□ 0.3
CHFR-202ENST00000315585 CNTNAP5Q8WYK1 1306 aa16.93■□□□□ 0.3
CHFR-202ENST00000315585 MYH2Q9UKX2 1941 aa16.93■□□□□ 0.3
CHFR-202ENST00000315585 FOXN1O15353 648 aa16.92■□□□□ 0.3
CHFR-202ENST00000315585 GTF2IP78347 998 aa16.92■□□□□ 0.3
CHFR-202ENST00000315585 SEMA3FQ13275 785 aa16.92■□□□□ 0.3
CHFR-202ENST00000315585 DPF2Q92785 391 aa16.92■□□□□ 0.3
CHFR-202ENST00000315585 SYMPKQ92797 1274 aaKnown RBP16.92■□□□□ 0.3
CHFR-202ENST00000315585 GAKO14976 1311 aa16.92■□□□□ 0.3
CHFR-202ENST00000315585 DLEC1Q9Y238 1755 aa16.92■□□□□ 0.3
CHFR-202ENST00000315585 ROBO3Q96MS0 1386 aa16.92■□□□□ 0.3
CHFR-202ENST00000315585 COL11A2P13942 1736 aaPredicted RBP16.92■□□□□ 0.3
CHFR-202ENST00000315585 TBX2Q13207 712 aaPredicted RBP16.92■□□□□ 0.3
CHFR-202ENST00000315585 ZNF397Q8NF99 534 aaPredicted RBP16.92■□□□□ 0.3
CHFR-202ENST00000315585 FBXO41Q8TF61 875 aa16.92■□□□□ 0.3
CHFR-202ENST00000315585 ANKS1AQ92625 1134 aa16.92■□□□□ 0.3
CHFR-202ENST00000315585 TNFRSF25Q93038 417 aa16.92■□□□□ 0.3
CHFR-202ENST00000315585 PAGE5Q96GU1 130 aa16.92■□□□□ 0.3
CHFR-202ENST00000315585 NAA15Q9BXJ9 866 aaKnown RBP16.92■□□□□ 0.3
CHFR-202ENST00000315585 RMND1Q9NWS8 449 aa16.92■□□□□ 0.3
CHFR-202ENST00000315585 GRIK5Q16478 980 aa16.91■□□□□ 0.3
CHFR-202ENST00000315585 TEX11Q8IYF3 940 aa16.91■□□□□ 0.3
CHFR-202ENST00000315585 ANKRD20A12PQ8NF67 263 aa16.91■□□□□ 0.3
CHFR-202ENST00000315585 TGFBRAP1Q8WUH2 860 aa16.91■□□□□ 0.3
CHFR-202ENST00000315585 OGFRQ9NZT2 677 aa16.91■□□□□ 0.3
CHFR-202ENST00000315585 ZNF215Q9UL58 517 aaPredicted RBP16.91■□□□□ 0.3
CHFR-202ENST00000315585 USP17L8P0C7I0 530 aa16.91■□□□□ 0.3
CHFR-202ENST00000315585 PRR29P0C7W0 189 aa16.91■□□□□ 0.3
CHFR-202ENST00000315585 PTGDRQ13258 359 aa16.91■□□□□ 0.3
CHFR-202ENST00000315585 CC2D2BQ6DHV5 1058 aa16.91■□□□□ 0.3
CHFR-202ENST00000315585 SYT10Q6XYQ8 523 aa16.91■□□□□ 0.3
CHFR-202ENST00000315585 PODNQ7Z5L7 613 aa16.91■□□□□ 0.3
CHFR-202ENST00000315585 SRBD1Q8N5C6 995 aaKnown RBP16.91■□□□□ 0.3
CHFR-202ENST00000315585 LZTS2Q9BRK4 669 aa16.91■□□□□ 0.3
CHFR-202ENST00000315585 TPM1P09493 284 aa16.9■□□□□ 0.3
CHFR-202ENST00000315585 LONP1P36776 959 aaKnown RBP16.9■□□□□ 0.3
CHFR-202ENST00000315585 ZNF174Q15697 407 aa16.9■□□□□ 0.3
CHFR-202ENST00000315585 CCDC148Q8NFR7 591 aa16.9■□□□□ 0.3
CHFR-202ENST00000315585 MKNK2Q9HBH9 465 aa16.9■□□□□ 0.3
CHFR-202ENST00000315585 NAV1Q8NEY1 1877 aa16.9■□□□□ 0.3
CHFR-202ENST00000315585 A0A1B0GTH6 734 aa16.9■□□□□ 0.3
CHFR-202ENST00000315585 SPAG1Q07617 926 aa16.9■□□□□ 0.3
CHFR-202ENST00000315585 NR1I3Q14994 352 aa16.9■□□□□ 0.3
CHFR-202ENST00000315585 EPSTI1Q96J88 318 aa16.9■□□□□ 0.3
CHFR-202ENST00000315585 TCP11L1Q9NUJ3 509 aa16.9■□□□□ 0.3
CHFR-202ENST00000315585 CYP2D6P10635 497 aa16.89■□□□□ 0.29
CHFR-202ENST00000315585 FMR1Q06787 632 aaKnown RBP eCLIP16.89■□□□□ 0.29
CHFR-202ENST00000315585 DPYDQ12882 1025 aa16.89■□□□□ 0.29
CHFR-202ENST00000315585 PPFIBP1Q86W92 1011 aa16.89■□□□□ 0.29
CHFR-202ENST00000315585 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
CHFR-202ENST00000315585 SYNRGQ9UMZ2 1314 aa16.89■□□□□ 0.29
CHFR-202ENST00000315585 VWA3AA6NCI4 1184 aa16.89■□□□□ 0.29
CHFR-202ENST00000315585 AFMP43652 599 aa16.89■□□□□ 0.29
CHFR-202ENST00000315585 GRIPAP1Q4V328 841 aa16.89■□□□□ 0.29
CHFR-202ENST00000315585 PANX2Q96RD6 677 aa16.89■□□□□ 0.29
CHFR-202ENST00000315585 MYL1P05976 194 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 FAM47AQ5JRC9 791 aa16.88■□□□□ 0.29
CHFR-202ENST00000315585 PIK3AP1Q6ZUJ8 805 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms