RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 MYCT1Q8N699 235 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 TRIM58Q8NG06 486 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 CSRNP2Q9H175 543 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 MRPL44Q9H9J2 332 aaKnown RBP15.29■□□□□ 0.04
SPAST-201ENST00000315285 RNF26Q9BY78 433 aaPredicted RBP15.29■□□□□ 0.04
SPAST-201ENST00000315285 FMNL1O95466 1100 aaPredicted RBP15.29■□□□□ 0.04
SPAST-201ENST00000315285 RPN1P04843 607 aaKnown RBP15.29■□□□□ 0.04
SPAST-201ENST00000315285 PI16Q6UXB8 463 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 NEK8Q86SG6 692 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 PPP1R13BQ96KQ4 1090 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 HAUS4Q9H6D7 363 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 ATP8A2Q9NTI2 1148 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 CTTNBP2NLQ9P2B4 639 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 EXOC3O60645 756 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 TCP10Q12799 353 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 PPFIA1Q13136 1202 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 GALNT17Q6IS24 598 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 GDAP1L1Q96MZ0 367 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 GSDMAQ96QA5 445 aa15.29■□□□□ 0.04
SPAST-201ENST00000315285 UNC13BO14795 1591 aa15.28■□□□□ 0.04
SPAST-201ENST00000315285 MYOCDQ8IZQ8 938 aa15.28■□□□□ 0.04
SPAST-201ENST00000315285 GNA14O95837 355 aa15.28■□□□□ 0.04
SPAST-201ENST00000315285 ERCC5P28715 1186 aaPredicted RBP15.28■□□□□ 0.04
SPAST-201ENST00000315285 LONP1P36776 959 aaKnown RBP15.28■□□□□ 0.04
SPAST-201ENST00000315285 ZYXQ15942 572 aaKnown RBP15.28■□□□□ 0.04
SPAST-201ENST00000315285 RUFY4Q6ZNE9 571 aa15.28■□□□□ 0.04
SPAST-201ENST00000315285 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.28■□□□□ 0.04
SPAST-201ENST00000315285 PUS7LQ9H0K6 701 aaKnown RBP15.28■□□□□ 0.04
SPAST-201ENST00000315285 KDM3AQ9Y4C1 1321 aa15.28■□□□□ 0.04
SPAST-201ENST00000315285 MXRA7P84157 204 aa15.28■□□□□ 0.04
SPAST-201ENST00000315285 PEX26Q7Z412 305 aa15.28■□□□□ 0.04
SPAST-201ENST00000315285 NKIRAS1Q9NYS0 192 aa15.28■□□□□ 0.04
SPAST-201ENST00000315285 ZBTB1Q9Y2K1 713 aa15.28■□□□□ 0.04
SPAST-201ENST00000315285 GOLGA8HP0CJ92 632 aa15.27■□□□□ 0.04
SPAST-201ENST00000315285 MAEAQ7L5Y9 396 aa15.27■□□□□ 0.04
SPAST-201ENST00000315285 DAAM2Q86T65 1068 aa15.27■□□□□ 0.04
SPAST-201ENST00000315285 SYCE1Q8N0S2 351 aa15.27■□□□□ 0.04
SPAST-201ENST00000315285 SREK1Q8WXA9 508 aaKnown RBP15.27■□□□□ 0.04
SPAST-201ENST00000315285 EXOC7Q9UPT5 735 aa15.27■□□□□ 0.04
SPAST-201ENST00000315285 CFBP00751 764 aa15.27■□□□□ 0.04
SPAST-201ENST00000315285 VIMP08670 466 aaKnown RBP15.27■□□□□ 0.04
SPAST-201ENST00000315285 ATP2A2P16615 1042 aaKnown RBP15.27■□□□□ 0.04
SPAST-201ENST00000315285 HARSP12081 509 aaKnown RBP15.27■□□□□ 0.03
SPAST-201ENST00000315285 CARD10Q9BWT7 1032 aa15.27■□□□□ 0.03
SPAST-201ENST00000315285 IL6STP40189 918 aaPredicted RBP15.27■□□□□ 0.03
SPAST-201ENST00000315285 GTF2IP78347 998 aa15.27■□□□□ 0.03
SPAST-201ENST00000315285 LSM14BQ9BX40 385 aaKnown RBP15.27■□□□□ 0.03
SPAST-201ENST00000315285 RABEP2Q9H5N1 569 aa15.27■□□□□ 0.03
SPAST-201ENST00000315285 ATP5DP30049 168 aa15.26■□□□□ 0.03
SPAST-201ENST00000315285 GPBP1Q86WP2 473 aa15.26■□□□□ 0.03
SPAST-201ENST00000315285 DDX39AO00148 427 aaKnown RBP15.26■□□□□ 0.03
SPAST-201ENST00000315285 COPB1P53618 953 aaKnown RBP15.26■□□□□ 0.03
SPAST-201ENST00000315285 EPN1Q9Y6I3 576 aaPredicted RBP15.26■□□□□ 0.03
SPAST-201ENST00000315285 SH2B2O14492 632 aaPredicted RBP15.26■□□□□ 0.03
SPAST-201ENST00000315285 SETDB1Q15047 1291 aa15.26■□□□□ 0.03
SPAST-201ENST00000315285 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.26■□□□□ 0.03
SPAST-201ENST00000315285 USP40Q9NVE5 1235 aa15.26■□□□□ 0.03
SPAST-201ENST00000315285 PCDHA12Q9UN75 941 aa15.26■□□□□ 0.03
SPAST-201ENST00000315285 TMEM94Q12767 1356 aa15.26■□□□□ 0.03
SPAST-201ENST00000315285 CASP14P31944 242 aa15.26■□□□□ 0.03
SPAST-201ENST00000315285 TRAPPC10P48553 1259 aa15.26■□□□□ 0.03
SPAST-201ENST00000315285 ZNF365Q70YC5 407 aa15.26■□□□□ 0.03
SPAST-201ENST00000315285 CCDC63Q8NA47 563 aa15.26■□□□□ 0.03
SPAST-201ENST00000315285 PCDHB13Q9Y5F0 798 aa15.26■□□□□ 0.03
SPAST-201ENST00000315285 ARHGAP31Q2M1Z3 1444 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 ANKARQ7Z5J8 1434 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 BCRP11274 1271 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 HEG1Q9ULI3 1381 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 XRCC5P13010 732 aaKnown RBP15.25■□□□□ 0.03
SPAST-201ENST00000315285 IFNAR1P17181 557 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 IFT74Q96LB3 600 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 DDX41Q9UJV9 622 aaKnown RBP15.25■□□□□ 0.03
SPAST-201ENST00000315285 HYOU1Q9Y4L1 999 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 LOC102724428A0A0B4J2F2 783 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 SIK1P57059 783 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 PSTPIP2Q9H939 334 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 GLI2P10070 1586 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 FRMPD2Q68DX3 1309 aaPredicted RBP15.25■□□□□ 0.03
SPAST-201ENST00000315285 SLC39A2Q9NP94 309 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 SWAP70Q9UH65 585 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 COMMD10Q9Y6G5 202 aa15.25■□□□□ 0.03
SPAST-201ENST00000315285 MMP1P03956 469 aa15.24■□□□□ 0.03
SPAST-201ENST00000315285 MADDQ8WXG6 1647 aa15.24■□□□□ 0.03
SPAST-201ENST00000315285 INPP5BP32019 993 aa15.24■□□□□ 0.03
SPAST-201ENST00000315285 GOLGA8FQ08AF8 430 aa15.24■□□□□ 0.03
SPAST-201ENST00000315285 GOLGA8DPQ0D2H9 430 aa15.24■□□□□ 0.03
SPAST-201ENST00000315285 LIN9Q5TKA1 542 aa15.24■□□□□ 0.03
SPAST-201ENST00000315285 SMC6Q96SB8 1091 aa15.24■□□□□ 0.03
SPAST-201ENST00000315285 MYCLP12524 364 aaPredicted RBP15.24■□□□□ 0.03
SPAST-201ENST00000315285 CRKLP46109 303 aaKnown RBP15.24■□□□□ 0.03
SPAST-201ENST00000315285 NR5A1Q13285 461 aa15.24■□□□□ 0.03
SPAST-201ENST00000315285 LRRC47Q8N1G4 583 aaKnown RBP15.24■□□□□ 0.03
SPAST-201ENST00000315285 ATP10DQ9P241 1426 aa15.24■□□□□ 0.03
SPAST-201ENST00000315285 NCBP1Q09161 790 aaKnown RBP15.24■□□□□ 0.03
SPAST-201ENST00000315285 NLRP10Q86W26 655 aa15.24■□□□□ 0.03
SPAST-201ENST00000315285 TPH2Q8IWU9 490 aa15.24■□□□□ 0.03
SPAST-201ENST00000315285 RABGGTAQ92696 567 aa15.24■□□□□ 0.03
SPAST-201ENST00000315285 ASIC3Q9UHC3 531 aa15.24■□□□□ 0.03
SPAST-201ENST00000315285 WDR17Q8IZU2 1322 aa15.23■□□□□ 0.03
SPAST-201ENST00000315285 RNF17Q9BXT8 1623 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms