RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 CAVIN2O95810 425 aa14.19□□□□□ -0.14
RNF4-201ENST00000314289 NFIAQ12857 509 aa14.19□□□□□ -0.14
RNF4-201ENST00000314289 C16orf86Q6ZW13 317 aa14.19□□□□□ -0.14
RNF4-201ENST00000314289 NAV1Q8NEY1 1877 aa14.19□□□□□ -0.14
RNF4-201ENST00000314289 RAD21O60216 631 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 PDE6BP35913 854 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 RBM5P52756 815 aaKnown RBP eCLIP14.18□□□□□ -0.14
RNF4-201ENST00000314289 ATP2B2Q01814 1243 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 WWC2Q6AWC2 1192 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 ZFPM1Q8IX07 1006 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 RGS22Q8NE09 1264 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 CACTINQ8WUQ7 758 aaKnown RBP14.18□□□□□ -0.14
RNF4-201ENST00000314289 SYMPKQ92797 1274 aaKnown RBP14.18□□□□□ -0.14
RNF4-201ENST00000314289 TMX4Q9H1E5 349 aaPredicted RBP14.18□□□□□ -0.14
RNF4-201ENST00000314289 CDK5RAP2Q96SN8 1893 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 EZH2Q15910 746 aaKnown RBP14.18□□□□□ -0.14
RNF4-201ENST00000314289 MASTLQ96GX5 879 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 IFNKQ9P0W0 207 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 GAKO14976 1311 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 SNED1Q8TER0 1413 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 ALDH1B1P30837 517 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 GRM4Q14833 912 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 SHROOM1Q2M3G4 852 aaPredicted RBP14.18□□□□□ -0.14
RNF4-201ENST00000314289 TIGD1Q96MW7 591 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 CEP131Q9UPN4 1083 aa14.18□□□□□ -0.14
RNF4-201ENST00000314289 USP17L5A8MUK1 530 aa14.17□□□□□ -0.14
RNF4-201ENST00000314289 AKR1B1P15121 316 aa14.17□□□□□ -0.14
RNF4-201ENST00000314289 NCAPHQ15003 741 aa14.17□□□□□ -0.14
RNF4-201ENST00000314289 POSTNQ15063 836 aa14.17□□□□□ -0.14
RNF4-201ENST00000314289 TRMT44Q8IYL2 757 aaKnown RBP14.17□□□□□ -0.14
RNF4-201ENST00000314289 XPO4Q9C0E2 1151 aaKnown RBP14.17□□□□□ -0.14
RNF4-201ENST00000314289 TUBE1Q9UJT0 475 aa14.17□□□□□ -0.14
RNF4-201ENST00000314289 ROBO3Q96MS0 1386 aa14.17□□□□□ -0.14
RNF4-201ENST00000314289 DLEC1Q9Y238 1755 aa14.17□□□□□ -0.14
RNF4-201ENST00000314289 PLCG2P16885 1265 aa14.17□□□□□ -0.14
RNF4-201ENST00000314289 SLF2Q8IX21 1173 aa14.17□□□□□ -0.14
RNF4-201ENST00000314289 MYH1P12882 1939 aa14.17□□□□□ -0.14
RNF4-201ENST00000314289 ADAMTSL1Q8N6G6 1762 aa14.17□□□□□ -0.14
RNF4-201ENST00000314289 MPHOSPH10O00566 681 aaKnown RBP14.16□□□□□ -0.14
RNF4-201ENST00000314289 COBLO75128 1261 aa14.16□□□□□ -0.14
RNF4-201ENST00000314289 MDM2Q00987 491 aaPredicted RBP14.16□□□□□ -0.14
RNF4-201ENST00000314289 BLIDQ8IZY5 108 aa14.16□□□□□ -0.14
RNF4-201ENST00000314289 DDX60LQ5H9U9 1706 aaKnown RBP14.16□□□□□ -0.14
RNF4-201ENST00000314289 FAM237AA0A1B0GTK4 181 aa14.16□□□□□ -0.14
RNF4-201ENST00000314289 IL17AQ16552 155 aa14.16□□□□□ -0.14
RNF4-201ENST00000314289 INF2Q27J81 1249 aa14.16□□□□□ -0.14
RNF4-201ENST00000314289 UTP14CQ5TAP6 766 aaKnown RBP14.16□□□□□ -0.14
RNF4-201ENST00000314289 CDC42EP5Q6NZY7 148 aa14.16□□□□□ -0.14
RNF4-201ENST00000314289 FAM163AQ96GL9 167 aaPredicted RBP14.16□□□□□ -0.14
RNF4-201ENST00000314289 C16orf45Q96MC5 204 aaPredicted RBP14.16□□□□□ -0.14
RNF4-201ENST00000314289 SMYD4Q8IYR2 804 aaPredicted RBP14.16□□□□□ -0.14
RNF4-201ENST00000314289 NEDD1Q8NHV4 660 aa14.16□□□□□ -0.14
RNF4-201ENST00000314289 PLIN2Q99541 437 aa14.16□□□□□ -0.14
RNF4-201ENST00000314289 MAN1B1Q9UKM7 699 aa14.16□□□□□ -0.14
RNF4-201ENST00000314289 H0YIN7 160 aa14.15□□□□□ -0.14
RNF4-201ENST00000314289 ACTN4O43707 911 aaKnown RBP14.15□□□□□ -0.14
RNF4-201ENST00000314289 PARP1P09874 1014 aaKnown RBP14.15□□□□□ -0.14
RNF4-201ENST00000314289 AOC3Q16853 763 aa14.15□□□□□ -0.14
RNF4-201ENST00000314289 TMED8Q6PL24 325 aaPredicted RBP14.15□□□□□ -0.14
RNF4-201ENST00000314289 SARM1Q6SZW1 724 aa14.15□□□□□ -0.14
RNF4-201ENST00000314289 PIGSQ96S52 555 aa14.15□□□□□ -0.14
RNF4-201ENST00000314289 HSD3B7Q9H2F3 369 aa14.15□□□□□ -0.14
RNF4-201ENST00000314289 ZNF287Q9HBT7 754 aa14.15□□□□□ -0.14
RNF4-201ENST00000314289 PALM3A6NDB9 673 aaPredicted RBP14.15□□□□□ -0.14
RNF4-201ENST00000314289 DPF2Q92785 391 aa14.15□□□□□ -0.14
RNF4-201ENST00000314289 BLZF1Q9H2G9 400 aa14.15□□□□□ -0.14
RNF4-201ENST00000314289 GPCPD1Q9NPB8 672 aa14.15□□□□□ -0.14
RNF4-201ENST00000314289 FANCLQ9NW38 375 aa14.15□□□□□ -0.14
RNF4-201ENST00000314289 COL11A2P13942 1736 aaPredicted RBP14.15□□□□□ -0.14
RNF4-201ENST00000314289 PP2D1A8MPX8 630 aa14.14□□□□□ -0.15
RNF4-201ENST00000314289 APOBEC3HQ6NTF7 200 aaKnown RBP14.14□□□□□ -0.15
RNF4-201ENST00000314289 ANKS1AQ92625 1134 aa14.14□□□□□ -0.15
RNF4-201ENST00000314289 CCDC194A0A1B0GVG4 234 aa14.14□□□□□ -0.15
RNF4-201ENST00000314289 NAPAP54920 295 aa14.14□□□□□ -0.15
RNF4-201ENST00000314289 KLHL10Q6JEL2 608 aa14.14□□□□□ -0.15
RNF4-201ENST00000314289 TMC4Q7Z404 712 aa14.14□□□□□ -0.15
RNF4-201ENST00000314289 SMARCE1Q969G3 411 aa14.14□□□□□ -0.15
RNF4-201ENST00000314289 TCP11L1Q9NUJ3 509 aa14.14□□□□□ -0.15
RNF4-201ENST00000314289 PCDHA4Q9UN74 947 aa14.14□□□□□ -0.15
RNF4-201ENST00000314289 LTBP1Q14766 1721 aa14.14□□□□□ -0.15
RNF4-201ENST00000314289 A0A0U1RQG5 324 aaPredicted RBP14.13□□□□□ -0.15
RNF4-201ENST00000314289 STXBP3O00186 592 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 TPM3P06753 285 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 CRKP46108 304 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 FMR1Q06787 632 aaKnown RBP eCLIP14.13□□□□□ -0.15
RNF4-201ENST00000314289 TMC6Q7Z403 805 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 ZSCAN29Q8IWY8 852 aaPredicted RBP14.13□□□□□ -0.15
RNF4-201ENST00000314289 TEKT1Q969V4 418 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 MRFAP1L1Q96HT8 127 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 PCDHA6Q9UN73 950 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 PCDHA8Q9Y5H6 950 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 ATP2C1P98194 919 aaPredicted RBP14.13□□□□□ -0.15
RNF4-201ENST00000314289 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.13□□□□□ -0.15
RNF4-201ENST00000314289 ZNF579Q8NAF0 562 aaKnown RBP14.13□□□□□ -0.15
RNF4-201ENST00000314289 TMEM60Q9H2L4 133 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 SERPINB13Q9UIV8 391 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 ECE2O60344 883 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 SLC16A2P36021 539 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 STX17P56962 302 aa14.13□□□□□ -0.15
RNF4-201ENST00000314289 GOLGA8FQ08AF8 430 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms