RNA–Protein interactions for RNA: ENST00000307731.1

CDC40-201, Transcript of cell division cycle 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC40, Length 3,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-201ENST00000307731 FOXP2O15409 715 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 INPP5BP32019 993 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 MRPL12P52815 198 aaKnown RBP8.5□□□□□ -1.05
CDC40-201ENST00000307731 TMTC3Q6ZXV5 915 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 MTMR14Q8NCE2 650 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 SMCR8Q8TEV9 937 aaPredicted RBP8.5□□□□□ -1.05
CDC40-201ENST00000307731 NUP88Q99567 741 aaPredicted RBP8.5□□□□□ -1.05
CDC40-201ENST00000307731 ELP3Q9H9T3 547 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 HOMER2Q9NSB8 354 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 NYAP2Q9P242 653 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 SPDYE3A6NKU9 549 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 ASTN2O75129 1339 aaPredicted RBP8.5□□□□□ -1.05
CDC40-201ENST00000307731 MCM4P33991 863 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 CAP2P40123 477 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 TXLNAP40222 546 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 STAT2P52630 851 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 PABPC4Q13310 644 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDC40-201ENST00000307731 DCAF4Q8WV16 495 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 PAGR1Q9BTK6 254 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 CTNND1O60716 968 aaKnown RBP8.5□□□□□ -1.05
CDC40-201ENST00000307731 EGFRP00533 1210 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 CDC27P30260 824 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 RCAN1P53805 252 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 MAP3K9P80192 1104 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 FAM83BQ5T0W9 1011 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 FBXO11Q86XK2 927 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 ZKSCAN4Q969J2 545 aaPredicted RBP8.5□□□□□ -1.05
CDC40-201ENST00000307731 PIGSQ96S52 555 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 NBPF3Q9H094 633 aa8.5□□□□□ -1.05
CDC40-201ENST00000307731 BAZ2AQ9UIF9 1905 aaKnown RBP8.49□□□□□ -1.05
CDC40-201ENST00000307731 BAG4O95429 457 aaKnown RBP8.49□□□□□ -1.05
CDC40-201ENST00000307731 FMNL1O95466 1100 aaPredicted RBP8.49□□□□□ -1.05
CDC40-201ENST00000307731 GRM4Q14833 912 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 SYDE2Q5VT97 1194 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 FCHSD1Q86WN1 690 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 CCDC43Q96MW1 224 aaKnown RBP8.49□□□□□ -1.05
CDC40-201ENST00000307731 MBD3O95983 291 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 ALAS1P13196 640 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 ADCY7P51828 1080 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 DNM1Q05193 864 aaKnown RBP8.49□□□□□ -1.05
CDC40-201ENST00000307731 JAKMIP3Q5VZ66 844 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 NSMFQ6X4W1 530 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 BRAPQ7Z569 592 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 CDK5RAP3Q96JB5 506 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 TAF1DQ9H5J8 278 aaPredicted RBP8.49□□□□□ -1.05
CDC40-201ENST00000307731 NRXN2Q9P2S2 1712 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 CELF2O95319 508 aaKnown RBP8.49□□□□□ -1.05
CDC40-201ENST00000307731 NDUFB10O96000 172 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 CFBP00751 764 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 HMGCS2P54868 508 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 FAM173BQ6P4H8 233 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 FAM160B2Q86V87 743 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 ANKRD13AQ8IZ07 590 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 SCYL3Q8IZE3 742 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 AIFM3Q96NN9 605 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 PCDHA1Q9Y5I3 950 aa8.49□□□□□ -1.05
CDC40-201ENST00000307731 BAZ2BQ9UIF8 2168 aaKnown RBP8.48□□□□□ -1.05
CDC40-201ENST00000307731 ZC3H4Q9UPT8 1303 aaKnown RBP8.48□□□□□ -1.05
CDC40-201ENST00000307731 SMCO2A6NFE2 343 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 MTMR2Q13614 643 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 RCSD1Q6JBY9 416 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 STAG2Q8N3U4 1231 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 CDCA5Q96FF9 252 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 SDF4Q9BRK5 362 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 AMNQ9BXJ7 453 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 TCP11L1Q9NUJ3 509 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 FZD1Q9UP38 647 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 QSER1Q2KHR3 1735 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 ARAP2Q8WZ64 1704 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 UBE2Q2LH0YL09 131 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 PRPF3O43395 683 aaKnown RBP8.48□□□□□ -1.05
CDC40-201ENST00000307731 KINO60870 393 aaKnown RBP8.48□□□□□ -1.05
CDC40-201ENST00000307731 SEC23AQ15436 765 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 PIK3AP1Q6ZUJ8 805 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 REXO1Q8N1G1 1221 aaKnown RBP8.48□□□□□ -1.05
CDC40-201ENST00000307731 FBXO18Q8NFZ0 1043 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 GLT8D2Q9H1C3 349 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 FAM13BQ9NYF5 915 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 CCPG1Q9ULG6 757 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 CNPY2Q9Y2B0 182 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 MYO5AQ9Y4I1 1855 aaKnown RBP8.48□□□□□ -1.05
CDC40-201ENST00000307731 PKP1Q13835 747 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 CDC37Q16543 378 aaPredicted RBP8.48□□□□□ -1.05
CDC40-201ENST00000307731 ZNF280CQ8ND82 737 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 ACER1Q8TDN7 264 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 ZC3H15Q8WU90 426 aaKnown RBP8.48□□□□□ -1.05
CDC40-201ENST00000307731 VCPKMTQ9H867 229 aa8.48□□□□□ -1.05
CDC40-201ENST00000307731 ECE1P42892 770 aa8.47□□□□□ -1.05
CDC40-201ENST00000307731 SNAP25P60880 206 aa8.47□□□□□ -1.05
CDC40-201ENST00000307731 ZNF543Q08ER8 600 aa8.47□□□□□ -1.05
CDC40-201ENST00000307731 COA7Q96BR5 231 aa8.47□□□□□ -1.05
CDC40-201ENST00000307731 HOOK1Q9UJC3 728 aaKnown RBP8.47□□□□□ -1.05
CDC40-201ENST00000307731 MTMR6Q9Y217 621 aa8.47□□□□□ -1.05
CDC40-201ENST00000307731 BRD1O95696 1058 aa8.47□□□□□ -1.05
CDC40-201ENST00000307731 PDHBP11177 359 aa8.47□□□□□ -1.05
CDC40-201ENST00000307731 IL17RBQ9NRM6 502 aa8.47□□□□□ -1.05
CDC40-201ENST00000307731 GINM1Q9NU53 330 aa8.47□□□□□ -1.05
CDC40-201ENST00000307731 MRPL11Q9Y3B7 192 aaKnown RBP8.47□□□□□ -1.05
CDC40-201ENST00000307731 BTBD18B2RXH4 712 aa8.47□□□□□ -1.05
CDC40-201ENST00000307731 TRAK2O60296 914 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms