RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 RNF26Q9BY78 433 aaPredicted RBP14.83□□□□□ -0.04
DDX54-201ENST00000306014 MKRN1Q9UHC7 482 aaKnown RBP14.83□□□□□ -0.04
DDX54-201ENST00000306014 FAN1Q9Y2M0 1017 aa14.83□□□□□ -0.04
DDX54-201ENST00000306014 CEP170BQ9Y4F5 1589 aaPredicted RBP14.82□□□□□ -0.04
DDX54-201ENST00000306014 DNM2P50570 870 aa14.82□□□□□ -0.04
DDX54-201ENST00000306014 DCAF17Q5H9S7 520 aaPredicted RBP14.82□□□□□ -0.04
DDX54-201ENST00000306014 TPTE2Q6XPS3 522 aa14.82□□□□□ -0.04
DDX54-201ENST00000306014 LCORLQ8N3X6 602 aa14.82□□□□□ -0.04
DDX54-201ENST00000306014 ARFGAP2Q8N6H7 521 aa14.82□□□□□ -0.04
DDX54-201ENST00000306014 SMIM23A6NLE4 172 aa14.82□□□□□ -0.04
DDX54-201ENST00000306014 LIFRP42702 1097 aa14.82□□□□□ -0.04
DDX54-201ENST00000306014 GOLGA5Q8TBA6 731 aa14.82□□□□□ -0.04
DDX54-201ENST00000306014 SRPRBQ9Y5M8 271 aaKnown RBP14.82□□□□□ -0.04
DDX54-201ENST00000306014 FOXN1O15353 648 aa14.82□□□□□ -0.04
DDX54-201ENST00000306014 HLA-DOAP06340 250 aa14.82□□□□□ -0.04
DDX54-201ENST00000306014 EIF6P56537 245 aaKnown RBP14.82□□□□□ -0.04
DDX54-201ENST00000306014 SHC4Q6S5L8 630 aa14.82□□□□□ -0.04
DDX54-201ENST00000306014 A0A0G2JLW4 131 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 CDC27P30260 824 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 ANKRD13CQ8N6S4 541 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 RPGRIP1Q96KN7 1286 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 TBC1D7Q9P0N9 293 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 NCAPD2Q15021 1401 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 KRT13P13646 458 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 TMEM132AQ24JP5 1023 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 SLC9C1Q4G0N8 1177 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 CCDC121Q6ZUS5 278 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 UBLCP1Q8WVY7 318 aaPredicted RBP14.81□□□□□ -0.04
DDX54-201ENST00000306014 GPCPD1Q9NPB8 672 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 RTCBQ9Y3I0 505 aaKnown RBP14.81□□□□□ -0.04
DDX54-201ENST00000306014 SNAP23O00161 211 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 RAD51AP2Q09MP3 1159 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 SCARF1Q14162 830 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 CCDC84Q86UT8 332 aaPredicted RBP14.81□□□□□ -0.04
DDX54-201ENST00000306014 KLHL7Q8IXQ5 586 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 SYNE4Q8N205 404 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 SNX29Q8TEQ0 813 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 ANKRD2Q9GZV1 360 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 FAM204AQ9H8W3 233 aa14.81□□□□□ -0.04
DDX54-201ENST00000306014 CTDNEP1O95476 244 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 PTPREP23469 700 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 CPLX4Q7Z7G2 160 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 IFT20Q8IY31 132 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 RASGRP4Q8TDF6 673 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 PPM1EQ8WY54 764 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 STRBPQ96SI9 672 aaKnown RBP14.8□□□□□ -0.04
DDX54-201ENST00000306014 PXDNLA1KZ92 1463 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 PPFIA1Q13136 1202 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 ZNF804AQ7Z570 1209 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 CEP57Q86XR8 500 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 FAM71BQ8TC56 605 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 LMBR1Q8WVP7 490 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 SEC31BQ9NQW1 1179 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 CCDC87Q9NVE4 849 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 ZBTB1Q9Y2K1 713 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 RFX7Q2KHR2 1363 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 INPP5BP32019 993 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 CC2D1AQ6P1N0 951 aaPredicted RBP14.8□□□□□ -0.04
DDX54-201ENST00000306014 TEX11Q8IYF3 940 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 ANKRD62A6NC57 917 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 B4DLN1 442 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 CHRNDQ07001 517 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 CCDC65Q8IXS2 484 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.8□□□□□ -0.04
DDX54-201ENST00000306014 TBC1D5Q92609 795 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 CCDC114Q96M63 670 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 MED4Q9NPJ6 270 aa14.8□□□□□ -0.04
DDX54-201ENST00000306014 SHPRHQ149N8 1683 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 ATG9AQ7Z3C6 839 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 KRT25Q7Z3Z0 450 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 NLRP10Q86W26 655 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 NELFCDQ8IXH7 590 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 TRIM58Q8NG06 486 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 PAGE5Q96GU1 130 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 PANX2Q96RD6 677 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 TECP42680 631 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 RABL6Q3YEC7 729 aaPredicted RBP14.79□□□□□ -0.04
DDX54-201ENST00000306014 NCAPH2Q6IBW4 605 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 PNMA1Q8ND90 353 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 TTLL11Q8NHH1 800 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 SELENOSQ9BQE4 189 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 ABCB6Q9NP58 842 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 NEDD4P46934 1319 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 C1orf167Q5SNV9 1468 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 USP32Q8NFA0 1604 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 PRR29P0C7W0 189 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 ACTN2P35609 894 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 RASGRF1Q13972 1273 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 CFAP221Q4G0U5 840 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 STXBP4Q6ZWJ1 553 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 MAPKAPK5Q8IW41 473 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 CCDC155Q8N6L0 562 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 PPLO60437 1756 aa14.79□□□□□ -0.04
DDX54-201ENST00000306014 CYP2D7A0A087X1C5 515 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 GOLGA8HP0CJ92 632 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 FOXO4P98177 505 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 ST3GAL1Q11201 340 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 HERC4Q5GLZ8 1057 aaPredicted RBP14.78□□□□□ -0.04
DDX54-201ENST00000306014 WDR24Q96S15 920 aa14.78□□□□□ -0.04
DDX54-201ENST00000306014 TUBGCP2Q9BSJ2 902 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms