RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 PARP1P09874 1014 aaKnown RBP13.02□□□□□ -0.32
SCG2-201ENST00000305409 BLIDQ8IZY5 108 aa13.02□□□□□ -0.32
SCG2-201ENST00000305409 GPCPD1Q9NPB8 672 aa13.02□□□□□ -0.32
SCG2-201ENST00000305409 CEP131Q9UPN4 1083 aa13.02□□□□□ -0.32
SCG2-201ENST00000305409 LTBP1Q14766 1721 aa13.02□□□□□ -0.33
SCG2-201ENST00000305409 BMP6P22004 513 aa13.02□□□□□ -0.33
SCG2-201ENST00000305409 LMOD1P29536 600 aaPredicted RBP13.02□□□□□ -0.33
SCG2-201ENST00000305409 IL17AQ16552 155 aa13.02□□□□□ -0.33
SCG2-201ENST00000305409 INF2Q27J81 1249 aa13.02□□□□□ -0.33
SCG2-201ENST00000305409 ZSCAN29Q8IWY8 852 aaPredicted RBP13.02□□□□□ -0.33
SCG2-201ENST00000305409 KLHL34Q8N239 644 aa13.02□□□□□ -0.33
SCG2-201ENST00000305409 PIGSQ96S52 555 aa13.02□□□□□ -0.33
SCG2-201ENST00000305409 SERPINB13Q9UIV8 391 aa13.02□□□□□ -0.33
SCG2-201ENST00000305409 NAV1Q8NEY1 1877 aa13.02□□□□□ -0.33
SCG2-201ENST00000305409 FAM237AA0A1B0GTK4 181 aa13.01□□□□□ -0.33
SCG2-201ENST00000305409 GABPAQ06546 454 aa13.01□□□□□ -0.33
SCG2-201ENST00000305409 PODNQ7Z5L7 613 aa13.01□□□□□ -0.33
SCG2-201ENST00000305409 FILIP1Q7Z7B0 1213 aa13.01□□□□□ -0.33
SCG2-201ENST00000305409 TIGD1Q96MW7 591 aa13.01□□□□□ -0.33
SCG2-201ENST00000305409 NAT10Q9H0A0 1025 aaKnown RBP13.01□□□□□ -0.33
SCG2-201ENST00000305409 OSBPL5Q9H0X9 879 aaPredicted RBP13.01□□□□□ -0.33
SCG2-201ENST00000305409 MTMR4Q9NYA4 1195 aa13.01□□□□□ -0.33
SCG2-201ENST00000305409 ADAMTSL1Q8N6G6 1762 aa13.01□□□□□ -0.33
SCG2-201ENST00000305409 DDTLA6NHG4 134 aaPredicted RBP13.01□□□□□ -0.33
SCG2-201ENST00000305409 STXBP3O00186 592 aa13.01□□□□□ -0.33
SCG2-201ENST00000305409 ZNF500O60304 480 aaPredicted RBP13.01□□□□□ -0.33
SCG2-201ENST00000305409 TOP1P11387 765 aaKnown RBP13.01□□□□□ -0.33
SCG2-201ENST00000305409 ATP1A3P13637 1013 aa13.01□□□□□ -0.33
SCG2-201ENST00000305409 MDM2Q00987 491 aaPredicted RBP13.01□□□□□ -0.33
SCG2-201ENST00000305409 DACT2Q5SW24 774 aa13.01□□□□□ -0.33
SCG2-201ENST00000305409 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
SCG2-201ENST00000305409 DDX60LQ5H9U9 1706 aaKnown RBP13.01□□□□□ -0.33
SCG2-201ENST00000305409 SLX4Q8IY92 1834 aa13.01□□□□□ -0.33
SCG2-201ENST00000305409 CAVIN2O95810 425 aa13□□□□□ -0.33
SCG2-201ENST00000305409 SHMT1P34896 483 aa13□□□□□ -0.33
SCG2-201ENST00000305409 SLC16A2P36021 539 aa13□□□□□ -0.33
SCG2-201ENST00000305409 NAPAP54920 295 aa13□□□□□ -0.33
SCG2-201ENST00000305409 KIAA2012Q0VF49 1180 aa13□□□□□ -0.33
SCG2-201ENST00000305409 POSTNQ15063 836 aa13□□□□□ -0.33
SCG2-201ENST00000305409 TTBK2Q6IQ55 1244 aa13□□□□□ -0.33
SCG2-201ENST00000305409 TUBE1Q9UJT0 475 aa13□□□□□ -0.33
SCG2-201ENST00000305409 PCDHA6Q9UN73 950 aa13□□□□□ -0.33
SCG2-201ENST00000305409 PCDHA4Q9UN74 947 aa13□□□□□ -0.33
SCG2-201ENST00000305409 PCDHA8Q9Y5H6 950 aa13□□□□□ -0.33
SCG2-201ENST00000305409 PPIP5K2O43314 1243 aa13□□□□□ -0.33
SCG2-201ENST00000305409 ACTN4O43707 911 aaKnown RBP13□□□□□ -0.33
SCG2-201ENST00000305409 SMC2O95347 1197 aa13□□□□□ -0.33
SCG2-201ENST00000305409 PDHBP11177 359 aa13□□□□□ -0.33
SCG2-201ENST00000305409 GNAQP50148 359 aa13□□□□□ -0.33
SCG2-201ENST00000305409 NCAPHQ15003 741 aa13□□□□□ -0.33
SCG2-201ENST00000305409 CCDC178Q5BJE1 867 aa13□□□□□ -0.33
SCG2-201ENST00000305409 STYK1Q6J9G0 422 aa13□□□□□ -0.33
SCG2-201ENST00000305409 COA7Q96BR5 231 aa13□□□□□ -0.33
SCG2-201ENST00000305409 TDRD3Q9H7E2 651 aaKnown RBP13□□□□□ -0.33
SCG2-201ENST00000305409 DNAJC18Q9H819 358 aa13□□□□□ -0.33
SCG2-201ENST00000305409 SUGT1Q9Y2Z0 365 aa13□□□□□ -0.33
SCG2-201ENST00000305409 LRRC37AA6NMS7 1700 aa13□□□□□ -0.33
SCG2-201ENST00000305409 CDK5RAP2Q96SN8 1893 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 CCDC194A0A1B0GVG4 234 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 YDJCA8MPS7 323 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
SCG2-201ENST00000305409 HHIPL2Q6UWX4 724 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 C7orf43Q8WVR3 580 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 PLIN2Q99541 437 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 TMEM60Q9H2L4 133 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 BARHL2Q9NY43 387 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 MAN1B1Q9UKM7 699 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 R3HCC1Q9Y3T6 440 aaKnown RBP12.99□□□□□ -0.33
SCG2-201ENST00000305409 DLEC1Q9Y238 1755 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 PP2D1A8MPX8 630 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 IGSF3O75054 1194 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 COBLO75128 1261 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 RAD17O75943 681 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 KCTD1Q719H9 257 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 TRMT44Q8IYL2 757 aaKnown RBP12.99□□□□□ -0.33
SCG2-201ENST00000305409 CNKSR1Q969H4 720 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 IFNKQ9P0W0 207 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 FAM198AQ9UFP1 575 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 MYH1P12882 1939 aa12.99□□□□□ -0.33
SCG2-201ENST00000305409 SMCO2A6NFE2 343 aa12.98□□□□□ -0.33
SCG2-201ENST00000305409 ATP2C1P98194 919 aaPredicted RBP12.98□□□□□ -0.33
SCG2-201ENST00000305409 STRIP1Q5VSL9 837 aa12.98□□□□□ -0.33
SCG2-201ENST00000305409 JAKMIP3Q5VZ66 844 aa12.98□□□□□ -0.33
SCG2-201ENST00000305409 SH3BP5LQ7L8J4 393 aa12.98□□□□□ -0.33
SCG2-201ENST00000305409 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
SCG2-201ENST00000305409 BLZF1Q9H2G9 400 aa12.98□□□□□ -0.33
SCG2-201ENST00000305409 TMEM260Q9NX78 707 aa12.98□□□□□ -0.33
SCG2-201ENST00000305409 BIN2Q9UBW5 565 aaPredicted RBP12.98□□□□□ -0.33
SCG2-201ENST00000305409 GOLGA6L6A8MZA4 724 aa12.98□□□□□ -0.33
SCG2-201ENST00000305409 GDF11O95390 407 aa12.98□□□□□ -0.33
SCG2-201ENST00000305409 CALML3P27482 149 aa12.98□□□□□ -0.33
SCG2-201ENST00000305409 SMYD4Q8IYR2 804 aaPredicted RBP12.98□□□□□ -0.33
SCG2-201ENST00000305409 CACTINQ8WUQ7 758 aaKnown RBP12.98□□□□□ -0.33
SCG2-201ENST00000305409 RRP36Q96EU6 259 aaKnown RBP12.98□□□□□ -0.33
SCG2-201ENST00000305409 XPO4Q9C0E2 1151 aaKnown RBP12.98□□□□□ -0.33
SCG2-201ENST00000305409 ZNF277Q9NRM2 450 aaPredicted RBP12.98□□□□□ -0.33
SCG2-201ENST00000305409 SCAF8Q9UPN6 1271 aaKnown RBP12.98□□□□□ -0.33
SCG2-201ENST00000305409 ZBTB12Q9Y330 459 aaPredicted RBP12.98□□□□□ -0.33
SCG2-201ENST00000305409 NRXN2Q9P2S2 1712 aa12.98□□□□□ -0.33
SCG2-201ENST00000305409 SCN9AQ15858 1988 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms