RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SGPL1O95470 568 aa31.39■■■□□ 2.62
CDKN2A-201ENST00000304494 ZKSCAN1P17029 563 aaPredicted RBP31.39■■■□□ 2.62
CDKN2A-201ENST00000304494 KLRC3Q07444 240 aa31.39■■■□□ 2.62
CDKN2A-201ENST00000304494 PPP4R3BQ5MIZ7 849 aa31.39■■■□□ 2.62
CDKN2A-201ENST00000304494 FAM83BQ5T0W9 1011 aa31.39■■■□□ 2.62
CDKN2A-201ENST00000304494 SAMD1Q6SPF0 538 aaPredicted RBP31.39■■■□□ 2.62
CDKN2A-201ENST00000304494 MOV10L1Q9BXT6 1211 aaKnown RBP31.39■■■□□ 2.62
CDKN2A-201ENST00000304494 HSPD1P10809 573 aaKnown RBP31.38■■■□□ 2.61
CDKN2A-201ENST00000304494 CTDSPL2Q05D32 466 aa31.38■■■□□ 2.61
CDKN2A-201ENST00000304494 PLS1Q14651 629 aa31.38■■■□□ 2.61
CDKN2A-201ENST00000304494 FAM47AQ5JRC9 791 aa31.38■■■□□ 2.61
CDKN2A-201ENST00000304494 PRPF38BQ5VTL8 546 aaKnown RBP31.38■■■□□ 2.61
CDKN2A-201ENST00000304494 ZNF589Q86UQ0 364 aaPredicted RBP31.38■■■□□ 2.61
CDKN2A-201ENST00000304494 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.38■■■□□ 2.61
CDKN2A-201ENST00000304494 HMX1Q9NP08 348 aaPredicted RBP31.38■■■□□ 2.61
CDKN2A-201ENST00000304494 ADAMTS5Q9UNA0 930 aa31.38■■■□□ 2.61
CDKN2A-201ENST00000304494 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.38■■■□□ 2.61
CDKN2A-201ENST00000304494 ZMYM6O95789 1325 aa31.38■■■□□ 2.61
CDKN2A-201ENST00000304494 RPTORQ8N122 1335 aa31.38■■■□□ 2.61
CDKN2A-201ENST00000304494 NDUFB10O96000 172 aa31.37■■■□□ 2.61
CDKN2A-201ENST00000304494 FGAP02671 866 aa31.37■■■□□ 2.61
CDKN2A-201ENST00000304494 GRB14Q14449 540 aa31.37■■■□□ 2.61
CDKN2A-201ENST00000304494 DEFB118Q96PH6 123 aa31.37■■■□□ 2.61
CDKN2A-201ENST00000304494 DIAPH3Q9NSV4 1193 aa31.37■■■□□ 2.61
CDKN2A-201ENST00000304494 PPP1R9AQ9ULJ8 1098 aa31.37■■■□□ 2.61
CDKN2A-201ENST00000304494 TSPY2A6NKD2 308 aa31.36■■■□□ 2.61
CDKN2A-201ENST00000304494 STRNO43815 780 aa31.36■■■□□ 2.61
CDKN2A-201ENST00000304494 MROH8Q9H579 483 aa31.36■■■□□ 2.61
CDKN2A-201ENST00000304494 FBXO28Q9NVF7 368 aa31.36■■■□□ 2.61
CDKN2A-201ENST00000304494 ERCC3P19447 782 aa31.35■■■□□ 2.61
CDKN2A-201ENST00000304494 TRIM32Q13049 653 aa31.35■■■□□ 2.61
CDKN2A-201ENST00000304494 GMCL1P1Q8NEA9 526 aa31.35■■■□□ 2.61
CDKN2A-201ENST00000304494 PARP14Q460N5 1801 aa31.35■■■□□ 2.61
CDKN2A-201ENST00000304494 ORC4O43929 436 aa31.34■■■□□ 2.61
CDKN2A-201ENST00000304494 TFRCP02786 760 aaKnown RBP31.34■■■□□ 2.61
CDKN2A-201ENST00000304494 TMEM132BQ14DG7 1078 aa31.34■■■□□ 2.61
CDKN2A-201ENST00000304494 MAP3K21Q5TCX8 1036 aa31.34■■■□□ 2.61
CDKN2A-201ENST00000304494 NUP88Q99567 741 aaPredicted RBP31.34■■■□□ 2.61
CDKN2A-201ENST00000304494 SLF1Q9BQI6 1058 aa31.34■■■□□ 2.61
CDKN2A-201ENST00000304494 VWA5AO00534 786 aa31.33■■■□□ 2.61
CDKN2A-201ENST00000304494 SLC25A27O95847 323 aa31.33■■■□□ 2.61
CDKN2A-201ENST00000304494 HOXC6P09630 235 aa31.33■■■□□ 2.61
CDKN2A-201ENST00000304494 PRKAR2AP13861 404 aaKnown RBP31.33■■■□□ 2.61
CDKN2A-201ENST00000304494 CWC27Q6UX04 472 aaKnown RBP31.33■■■□□ 2.61
CDKN2A-201ENST00000304494 NCAPG2Q86XI2 1143 aa31.33■■■□□ 2.61
CDKN2A-201ENST00000304494 LRRC47Q8N1G4 583 aaKnown RBP31.33■■■□□ 2.61
CDKN2A-201ENST00000304494 MYH4Q9Y623 1939 aa31.32■■■□□ 2.6
CDKN2A-201ENST00000304494 RANBP6O60518 1105 aaKnown RBP31.32■■■□□ 2.6
CDKN2A-201ENST00000304494 FGRP09769 529 aa31.32■■■□□ 2.6
CDKN2A-201ENST00000304494 PDE4AP27815 886 aa31.32■■■□□ 2.6
CDKN2A-201ENST00000304494 CCL14Q16627 93 aa31.32■■■□□ 2.6
CDKN2A-201ENST00000304494 CRISPLD2Q9H0B8 497 aa31.32■■■□□ 2.6
CDKN2A-201ENST00000304494 PDE4DIPQ5VU43 2346 aa31.32■■■□□ 2.6
CDKN2A-201ENST00000304494 DPP9Q86TI2 863 aa31.31■■■□□ 2.6
CDKN2A-201ENST00000304494 ABRAQ8N0Z2 381 aa31.31■■■□□ 2.6
CDKN2A-201ENST00000304494 PRPF38AQ8NAV1 312 aaKnown RBP31.31■■■□□ 2.6
CDKN2A-201ENST00000304494 INCENPQ9NQS7 918 aa31.31■■■□□ 2.6
CDKN2A-201ENST00000304494 FARP2O94887 1054 aaPredicted RBP31.3■■■□□ 2.6
CDKN2A-201ENST00000304494 PCP11498 1178 aaKnown RBP31.3■■■□□ 2.6
CDKN2A-201ENST00000304494 ADORA2AP29274 412 aa31.3■■■□□ 2.6
CDKN2A-201ENST00000304494 COPB2P35606 906 aa31.3■■■□□ 2.6
CDKN2A-201ENST00000304494 CACNB2Q08289 660 aaPredicted RBP31.3■■■□□ 2.6
CDKN2A-201ENST00000304494 MFSD14CQ5VZR4 134 aa31.3■■■□□ 2.6
CDKN2A-201ENST00000304494 SLFN13Q68D06 897 aa31.3■■■□□ 2.6
CDKN2A-201ENST00000304494 UBE2Q1Q7Z7E8 422 aa31.3■■■□□ 2.6
CDKN2A-201ENST00000304494 TOMM22Q9NS69 142 aa31.3■■■□□ 2.6
CDKN2A-201ENST00000304494 SLC5A4Q9NY91 659 aa31.3■■■□□ 2.6
CDKN2A-201ENST00000304494 FEM1BQ9UK73 627 aa31.3■■■□□ 2.6
CDKN2A-201ENST00000304494 STX8Q9UNK0 236 aa31.3■■■□□ 2.6
CDKN2A-201ENST00000304494 ZNF236Q9UL36 1845 aa31.3■■■□□ 2.6
CDKN2A-201ENST00000304494 TTC22Q5TAA0 569 aa31.29■■■□□ 2.6
CDKN2A-201ENST00000304494 RIOX2Q8IUF8 465 aa31.29■■■□□ 2.6
CDKN2A-201ENST00000304494 FCER1AP12319 257 aa31.28■■■□□ 2.6
CDKN2A-201ENST00000304494 STAT3P40763 770 aa31.28■■■□□ 2.6
CDKN2A-201ENST00000304494 ZNF214Q9UL59 606 aaPredicted RBP31.28■■■□□ 2.6
CDKN2A-201ENST00000304494 TACC3Q9Y6A5 838 aa31.28■■■□□ 2.6
CDKN2A-201ENST00000304494 BMP3P12645 472 aa31.27■■■□□ 2.6
CDKN2A-201ENST00000304494 REPS2Q8NFH8 660 aa31.27■■■□□ 2.6
CDKN2A-201ENST00000304494 NPLOC4Q8TAT6 608 aa31.27■■■□□ 2.6
CDKN2A-201ENST00000304494 GMCL1Q96IK5 515 aa31.27■■■□□ 2.6
CDKN2A-201ENST00000304494 IL17RBQ9NRM6 502 aa31.27■■■□□ 2.6
CDKN2A-201ENST00000304494 CTDP1Q9Y5B0 961 aaPredicted RBP31.27■■■□□ 2.6
CDKN2A-201ENST00000304494 HAND2P61296 217 aa31.26■■■□□ 2.59
CDKN2A-201ENST00000304494 RRP12Q5JTH9 1297 aaKnown RBP31.26■■■□□ 2.59
CDKN2A-201ENST00000304494 ANKLE1Q8NAG6 615 aa31.26■■■□□ 2.59
CDKN2A-201ENST00000304494 KIFC2Q96AC6 838 aa31.26■■■□□ 2.59
CDKN2A-201ENST00000304494 HTATIP2Q9BUP3 242 aa31.26■■■□□ 2.59
CDKN2A-201ENST00000304494 TEX13BQ9BXU2 312 aa31.26■■■□□ 2.59
CDKN2A-201ENST00000304494 RNF41Q9H4P4 317 aaPredicted RBP31.26■■■□□ 2.59
CDKN2A-201ENST00000304494 FLRT1Q9NZU1 646 aa31.26■■■□□ 2.59
CDKN2A-201ENST00000304494 COL11A1P12107 1806 aaPredicted RBP31.26■■■□□ 2.59
CDKN2A-201ENST00000304494 ZNF213O14771 459 aa31.25■■■□□ 2.59
CDKN2A-201ENST00000304494 ZBED4O75132 1171 aa31.25■■■□□ 2.59
CDKN2A-201ENST00000304494 GSPT1P15170 499 aaKnown RBP31.25■■■□□ 2.59
CDKN2A-201ENST00000304494 AKNAD1Q5T1N1 836 aa31.25■■■□□ 2.59
CDKN2A-201ENST00000304494 MFSD6Q6ZSS7 791 aa31.25■■■□□ 2.59
CDKN2A-201ENST00000304494 STAG1Q8WVM7 1258 aa31.25■■■□□ 2.59
CDKN2A-201ENST00000304494 NMT2O60551 498 aa31.24■■■□□ 2.59
CDKN2A-201ENST00000304494 SLC1A4P43007 532 aa31.24■■■□□ 2.59
CDKN2A-201ENST00000304494 NOVP48745 357 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms