RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 HLTFQ14527 1009 aaKnown RBP eCLIP15.8■□□□□ 0.12
SDC2-201ENST00000302190 SLC35F6Q8N357 371 aa15.8■□□□□ 0.12
SDC2-201ENST00000302190 CSGALNACT2Q8N6G5 542 aa15.8■□□□□ 0.12
SDC2-201ENST00000302190 SETDB2Q96T68 719 aa15.8■□□□□ 0.12
SDC2-201ENST00000302190 BMP2KQ9NSY1 1161 aaPredicted RBP15.8■□□□□ 0.12
SDC2-201ENST00000302190 TBC1D7Q9P0N9 293 aa15.8■□□□□ 0.12
SDC2-201ENST00000302190 BCCIPQ9P287 314 aaKnown RBP eCLIP15.8■□□□□ 0.12
SDC2-201ENST00000302190 HPS5Q9UPZ3 1129 aa15.8■□□□□ 0.12
SDC2-201ENST00000302190 MAPKAPK5Q8IW41 473 aa15.8■□□□□ 0.12
SDC2-201ENST00000302190 CEP89Q96ST8 783 aa15.8■□□□□ 0.12
SDC2-201ENST00000302190 PNMA6AP0CW24 399 aaPredicted RBP15.79■□□□□ 0.12
SDC2-201ENST00000302190 NOP2P46087 812 aaKnown RBP15.79■□□□□ 0.12
SDC2-201ENST00000302190 PDE4DQ08499 809 aa15.79■□□□□ 0.12
SDC2-201ENST00000302190 ODF2Q5BJF6 829 aa15.79■□□□□ 0.12
SDC2-201ENST00000302190 FAM196AQ6ZSG2 479 aa15.79■□□□□ 0.12
SDC2-201ENST00000302190 CEP112Q8N8E3 955 aa15.79■□□□□ 0.12
SDC2-201ENST00000302190 CALML4Q96GE6 196 aa15.79■□□□□ 0.12
SDC2-201ENST00000302190 FAM207AQ9NSI2 230 aaPredicted RBP15.79■□□□□ 0.12
SDC2-201ENST00000302190 MRC1P22897 1456 aa15.79■□□□□ 0.12
SDC2-201ENST00000302190 FMR1Q06787 632 aaKnown RBP eCLIP15.79■□□□□ 0.12
SDC2-201ENST00000302190 SUSD4Q5VX71 490 aa15.79■□□□□ 0.12
SDC2-201ENST00000302190 ZSCAN10Q96SZ4 725 aaPredicted RBP15.79■□□□□ 0.12
SDC2-201ENST00000302190 RTL9Q8NET4 1388 aa15.79■□□□□ 0.12
SDC2-201ENST00000302190 IKBKBO14920 756 aa15.79■□□□□ 0.12
SDC2-201ENST00000302190 PPP6R2O75170 966 aa15.79■□□□□ 0.12
SDC2-201ENST00000302190 SPAG1Q07617 926 aa15.79■□□□□ 0.12
SDC2-201ENST00000302190 ILDR1Q86SU0 546 aaPredicted RBP15.79■□□□□ 0.12
SDC2-201ENST00000302190 NAPGQ99747 312 aaPredicted RBP15.79■□□□□ 0.12
SDC2-201ENST00000302190 LY9Q9HBG7 655 aa15.79■□□□□ 0.12
SDC2-201ENST00000302190 RGS17Q9UGC6 210 aaPredicted RBP15.79■□□□□ 0.12
SDC2-201ENST00000302190 IFNAR1P17181 557 aa15.78■□□□□ 0.12
SDC2-201ENST00000302190 HNRNPH2P55795 449 aaKnown RBP15.78■□□□□ 0.12
SDC2-201ENST00000302190 KIF5AQ12840 1032 aa15.78■□□□□ 0.12
SDC2-201ENST00000302190 PARD6BQ9BYG5 372 aa15.78■□□□□ 0.12
SDC2-201ENST00000302190 USO1O60763 962 aaKnown RBP15.78■□□□□ 0.12
SDC2-201ENST00000302190 FMNL1O95466 1100 aaPredicted RBP15.78■□□□□ 0.12
SDC2-201ENST00000302190 PAFAH1B1P43034 410 aa15.78■□□□□ 0.12
SDC2-201ENST00000302190 CRACR2BQ8N4Y2 399 aaPredicted RBP15.78■□□□□ 0.12
SDC2-201ENST00000302190 PDE11AQ9HCR9 933 aa15.78■□□□□ 0.12
SDC2-201ENST00000302190 RMND1Q9NWS8 449 aa15.78■□□□□ 0.12
SDC2-201ENST00000302190 CCNT1O60563 726 aaKnown RBP15.78■□□□□ 0.12
SDC2-201ENST00000302190 APBA3O96018 575 aa15.78■□□□□ 0.12
SDC2-201ENST00000302190 SF3A3Q12874 501 aaKnown RBP eCLIP15.78■□□□□ 0.12
SDC2-201ENST00000302190 MROH5Q6ZUA9 1318 aa15.78■□□□□ 0.12
SDC2-201ENST00000302190 TMCO5BA8MYB1 307 aa15.77■□□□□ 0.12
SDC2-201ENST00000302190 MYH14Q7Z406 1995 aaKnown RBP15.77■□□□□ 0.12
SDC2-201ENST00000302190 CYLC1P35663 651 aaPredicted RBP15.77■□□□□ 0.11
SDC2-201ENST00000302190 NOC4LQ9BVI4 516 aaKnown RBP15.77■□□□□ 0.11
SDC2-201ENST00000302190 ALDH8A1Q9H2A2 487 aaPredicted RBP15.77■□□□□ 0.11
SDC2-201ENST00000302190 GDAQ9Y2T3 454 aa15.77■□□□□ 0.11
SDC2-201ENST00000302190 UTYO14607 1347 aa15.77■□□□□ 0.11
SDC2-201ENST00000302190 BMP15O95972 392 aa15.77■□□□□ 0.11
SDC2-201ENST00000302190 RXRBP28702 533 aa15.77■□□□□ 0.11
SDC2-201ENST00000302190 HIBADHP31937 336 aaKnown RBP15.77■□□□□ 0.11
SDC2-201ENST00000302190 PLCD1P51178 756 aa15.77■□□□□ 0.11
SDC2-201ENST00000302190 TGFBRAP1Q8WUH2 860 aa15.77■□□□□ 0.11
SDC2-201ENST00000302190 IFT81Q8WYA0 676 aa15.77■□□□□ 0.11
SDC2-201ENST00000302190 OSBPL5Q9H0X9 879 aaPredicted RBP15.77■□□□□ 0.11
SDC2-201ENST00000302190 RASSF4Q9H2L5 321 aa15.77■□□□□ 0.11
SDC2-201ENST00000302190 MORC2Q9Y6X9 1032 aaPredicted RBP15.77■□□□□ 0.11
SDC2-201ENST00000302190 ADAMTS7Q9UKP4 1686 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 EFCAB8A8MWE9 144 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 KCNJ18B7U540 433 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 RIMBP2O15034 1052 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 STX10O60499 249 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 CYP2D6P10635 497 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 KCNJ12Q14500 433 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 GPCPD1Q9NPB8 672 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 CTIFO43310 598 aaKnown RBP15.76■□□□□ 0.11
SDC2-201ENST00000302190 KRT86O43790 486 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 BAG3O95817 575 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 PRPF4BQ13523 1007 aaKnown RBP15.76■□□□□ 0.11
SDC2-201ENST00000302190 MORC3Q14149 939 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 SPATA1Q5VX52 437 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 RESP18Q5W5W9 173 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 CCDC43Q96MW1 224 aaKnown RBP15.76■□□□□ 0.11
SDC2-201ENST00000302190 NLRC4Q9NPP4 1024 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 WTIPA6NIX2 430 aaPredicted RBP15.76■□□□□ 0.11
SDC2-201ENST00000302190 CYP27A1Q02318 531 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 NCAPH2Q6IBW4 605 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 TXLNBQ8N3L3 684 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 GPATCH11Q8N954 259 aa15.76■□□□□ 0.11
SDC2-201ENST00000302190 PXDNLA1KZ92 1463 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 SMIM22K7EJ46 135 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 ZEB2O60315 1214 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 MAP9Q49MG5 647 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 ZFYVE27Q5T4F4 411 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 DYNLL2Q96FJ2 89 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 GPR101Q96P66 508 aaPredicted RBP15.75■□□□□ 0.11
SDC2-201ENST00000302190 FEZ2Q9UHY8 353 aaPredicted RBP15.75■□□□□ 0.11
SDC2-201ENST00000302190 RIPOR2Q9Y4F9 1068 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 TRIM49BA6NDI0 452 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 PP2D1A8MPX8 630 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 GSG1L2A8MUP6 293 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 LDHBP07195 334 aaKnown RBP15.75■□□□□ 0.11
SDC2-201ENST00000302190 CALML3P27482 149 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 ARID4AP29374 1257 aaPredicted RBP15.75■□□□□ 0.11
SDC2-201ENST00000302190 ZNF76P36508 570 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 CACNA1FO60840 1977 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 LONRF2Q1L5Z9 754 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms