RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 MAN1B1Q9UKM7 699 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 CCDC88AQ3V6T2 1871 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 CCDC194A0A1B0GVG4 234 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 PP2D1A8MPX8 630 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 SERPINC1P01008 464 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 PLCG2P16885 1265 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 PDE6BP35913 854 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 GRM4Q14833 912 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 SLF2Q8IX21 1173 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 TNFRSF25Q93038 417 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 TIGD1Q96MW7 591 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 TRMT1Q9NXH9 659 aaKnown RBP16.63■□□□□ 0.25
SMG8-201ENST00000300917 NAPAP54920 295 aa16.62■□□□□ 0.25
SMG8-201ENST00000300917 CREBRFQ8IUR6 639 aa16.62■□□□□ 0.25
SMG8-201ENST00000300917 SMARCE1Q969G3 411 aa16.62■□□□□ 0.25
SMG8-201ENST00000300917 MASTLQ96GX5 879 aa16.62■□□□□ 0.25
SMG8-201ENST00000300917 PIGSQ96S52 555 aa16.62■□□□□ 0.25
SMG8-201ENST00000300917 TUBE1Q9UJT0 475 aa16.62■□□□□ 0.25
SMG8-201ENST00000300917 KLRG2A4D1S0 409 aaPredicted RBP16.62■□□□□ 0.25
SMG8-201ENST00000300917 PARP1P09874 1014 aaKnown RBP16.62■□□□□ 0.25
SMG8-201ENST00000300917 ALDH1B1P30837 517 aa16.62■□□□□ 0.25
SMG8-201ENST00000300917 RBM10P98175 930 aaKnown RBP16.62■□□□□ 0.25
SMG8-201ENST00000300917 MYH6P13533 1939 aa16.62■□□□□ 0.25
SMG8-201ENST00000300917 ZNF772Q68DY9 489 aaPredicted RBP16.62■□□□□ 0.25
SMG8-201ENST00000300917 ZNF287Q9HBT7 754 aa16.62■□□□□ 0.25
SMG8-201ENST00000300917 CFAP100Q494V2 611 aa16.61■□□□□ 0.25
SMG8-201ENST00000300917 UQCRHLA0A096LP55 91 aa16.61■□□□□ 0.25
SMG8-201ENST00000300917 PLSCR1O15162 318 aa16.61■□□□□ 0.25
SMG8-201ENST00000300917 ACTN4O43707 911 aaKnown RBP16.61■□□□□ 0.25
SMG8-201ENST00000300917 UQCRHP07919 91 aa16.61■□□□□ 0.25
SMG8-201ENST00000300917 SLC16A2P36021 539 aa16.61■□□□□ 0.25
SMG8-201ENST00000300917 FANCCQ00597 558 aa16.61■□□□□ 0.25
SMG8-201ENST00000300917 FMR1Q06787 632 aaKnown RBP eCLIP16.61■□□□□ 0.259e-6■■■■□ 20.6
SMG8-201ENST00000300917 IL17AQ16552 155 aa16.61■□□□□ 0.25
SMG8-201ENST00000300917 AOC3Q16853 763 aa16.61■□□□□ 0.25
SMG8-201ENST00000300917 CDC42EP5Q6NZY7 148 aa16.61■□□□□ 0.25
SMG8-201ENST00000300917 ARID3AQ99856 593 aa16.61■□□□□ 0.25
SMG8-201ENST00000300917 H0YIN7 160 aa16.6■□□□□ 0.25
SMG8-201ENST00000300917 TPM4P67936 248 aa16.6■□□□□ 0.25
SMG8-201ENST00000300917 JAKMIP3Q5VZ66 844 aa16.6■□□□□ 0.25
SMG8-201ENST00000300917 NEDD1Q8NHV4 660 aa16.6■□□□□ 0.25
SMG8-201ENST00000300917 COA7Q96BR5 231 aa16.6■□□□□ 0.25
SMG8-201ENST00000300917 GAKO14976 1311 aa16.6■□□□□ 0.25
SMG8-201ENST00000300917 MDM2Q00987 491 aaPredicted RBP16.6■□□□□ 0.25
SMG8-201ENST00000300917 SARM1Q6SZW1 724 aa16.6■□□□□ 0.25
SMG8-201ENST00000300917 ZNF592Q92610 1267 aa16.6■□□□□ 0.25
SMG8-201ENST00000300917 MRFAP1L1Q96HT8 127 aa16.6■□□□□ 0.25
SMG8-201ENST00000300917 MAPK8IP1Q9UQF2 711 aa16.6■□□□□ 0.25
SMG8-201ENST00000300917 MYL5Q02045 173 aa16.6■□□□□ 0.25
SMG8-201ENST00000300917 TMEM60Q9H2L4 133 aa16.6■□□□□ 0.25
SMG8-201ENST00000300917 BIN2Q9UBW5 565 aaPredicted RBP16.6■□□□□ 0.25
SMG8-201ENST00000300917 PCDHA4Q9UN74 947 aa16.6■□□□□ 0.25
SMG8-201ENST00000300917 SNED1Q8TER0 1413 aa16.59■□□□□ 0.25
SMG8-201ENST00000300917 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
SMG8-201ENST00000300917 SKILP12757 684 aa16.59■□□□□ 0.25
SMG8-201ENST00000300917 CDK11BP21127 795 aaKnown RBP16.59■□□□□ 0.25
SMG8-201ENST00000300917 LETM2Q2VYF4 491 aa16.59■□□□□ 0.25
SMG8-201ENST00000300917 LRRC8AQ8IWT6 810 aa16.59■□□□□ 0.25
SMG8-201ENST00000300917 TEKT1Q969V4 418 aa16.59■□□□□ 0.25
SMG8-201ENST00000300917 HOOK1Q9UJC3 728 aaKnown RBP16.59■□□□□ 0.25
SMG8-201ENST00000300917 PALM3A6NDB9 673 aaPredicted RBP16.59■□□□□ 0.25
SMG8-201ENST00000300917 USP27XA6NNY8 438 aa16.59■□□□□ 0.25
SMG8-201ENST00000300917 SMTNL1A8MU46 457 aa16.59■□□□□ 0.25
SMG8-201ENST00000300917 KARSQ15046 597 aaKnown RBP16.59■□□□□ 0.25
SMG8-201ENST00000300917 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.59■□□□□ 0.25
SMG8-201ENST00000300917 HSD3B7Q9H2F3 369 aa16.59■□□□□ 0.25
SMG8-201ENST00000300917 TMEM260Q9NX78 707 aa16.59■□□□□ 0.25
SMG8-201ENST00000300917 KIAA1551Q9HCM1 1747 aa16.59■□□□□ 0.25
SMG8-201ENST00000300917 CRKP46108 304 aa16.58■□□□□ 0.25
SMG8-201ENST00000300917 UBASH3AP57075 661 aa16.58■□□□□ 0.25
SMG8-201ENST00000300917 TTBK2Q6IQ55 1244 aa16.58■□□□□ 0.25
SMG8-201ENST00000300917 SERPINB13Q9UIV8 391 aa16.58■□□□□ 0.25
SMG8-201ENST00000300917 PCDHA6Q9UN73 950 aa16.58■□□□□ 0.25
SMG8-201ENST00000300917 PCDHA8Q9Y5H6 950 aa16.58■□□□□ 0.25
SMG8-201ENST00000300917 FAM237AA0A1B0GTK4 181 aa16.58■□□□□ 0.24
SMG8-201ENST00000300917 SMCO2A6NFE2 343 aa16.58■□□□□ 0.24
SMG8-201ENST00000300917 STXBP3O00186 592 aa16.58■□□□□ 0.24
SMG8-201ENST00000300917 C21orf2O43822 256 aa16.58■□□□□ 0.24
SMG8-201ENST00000300917 GNAQP50148 359 aa16.58■□□□□ 0.24
SMG8-201ENST00000300917 DHX8Q14562 1220 aaKnown RBP16.58■□□□□ 0.24
SMG8-201ENST00000300917 CCDC96Q2M329 555 aa16.58■□□□□ 0.24
SMG8-201ENST00000300917 APOBEC3HQ6NTF7 200 aaKnown RBP16.58■□□□□ 0.24
SMG8-201ENST00000300917 KCTD1Q719H9 257 aa16.58■□□□□ 0.24
SMG8-201ENST00000300917 SEC63Q9UGP8 760 aaKnown RBP16.58■□□□□ 0.24
SMG8-201ENST00000300917 TPM3P06753 285 aa16.58■□□□□ 0.24
SMG8-201ENST00000300917 CALML3P27482 149 aa16.58■□□□□ 0.24
SMG8-201ENST00000300917 FAM163AQ96GL9 167 aaPredicted RBP16.58■□□□□ 0.24
SMG8-201ENST00000300917 PAGE5Q96GU1 130 aa16.58■□□□□ 0.24
SMG8-201ENST00000300917 NFE2L3Q9Y4A8 694 aa16.58■□□□□ 0.24
SMG8-201ENST00000300917 ROBO3Q96MS0 1386 aa16.57■□□□□ 0.24
SMG8-201ENST00000300917 ECE2O60344 883 aa16.57■□□□□ 0.24
SMG8-201ENST00000300917 TOP1P11387 765 aaKnown RBP16.57■□□□□ 0.24
SMG8-201ENST00000300917 ATP2C1P98194 919 aaPredicted RBP16.57■□□□□ 0.24
SMG8-201ENST00000300917 TPD52L1Q16890 204 aaPredicted RBP16.57■□□□□ 0.24
SMG8-201ENST00000300917 RGS22Q8NE09 1264 aa16.57■□□□□ 0.24
SMG8-201ENST00000300917 SAMSN1Q9NSI8 373 aaKnown RBP16.57■□□□□ 0.24
SMG8-201ENST00000300917 RRP36Q96EU6 259 aaKnown RBP16.57■□□□□ 0.24
SMG8-201ENST00000300917 ZNF579Q8NAF0 562 aaKnown RBP16.57■□□□□ 0.24
SMG8-201ENST00000300917 BARHL2Q9NY43 387 aa16.57■□□□□ 0.24
SMG8-201ENST00000300917 MTMR4Q9NYA4 1195 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms