RNA–Protein interactions for RNA: ENST00000297518.4

CDK5-201, Transcript of cyclin dependent kinase 5, humanhuman

TSL 1 (best) BASIC

Gene CDK5, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-201ENST00000297518 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
CDK5-201ENST00000297518 GPR142Q7Z601 462 aa14.17□□□□□ -0.14
CDK5-201ENST00000297518 PLEKHH3Q7Z736 793 aa14.17□□□□□ -0.14
CDK5-201ENST00000297518 GMCL1P1Q8NEA9 526 aa14.17□□□□□ -0.14
CDK5-201ENST00000297518 NUP88Q99567 741 aaPredicted RBP14.17□□□□□ -0.14
CDK5-201ENST00000297518 CWC22Q9HCG8 908 aaKnown RBP14.17□□□□□ -0.14
CDK5-201ENST00000297518 IL17RBQ9NRM6 502 aa14.17□□□□□ -0.14
CDK5-201ENST00000297518 FBXO28Q9NVF7 368 aa14.17□□□□□ -0.14
CDK5-201ENST00000297518 CTNNA3Q9UI47 895 aa14.17□□□□□ -0.14
CDK5-201ENST00000297518 GJD2Q9UKL4 321 aa14.17□□□□□ -0.14
CDK5-201ENST00000297518 STX8Q9UNK0 236 aa14.17□□□□□ -0.14
CDK5-201ENST00000297518 COL11A1P12107 1806 aaPredicted RBP14.17□□□□□ -0.14
CDK5-201ENST00000297518 SGSM2O43147 1006 aa14.16□□□□□ -0.14
CDK5-201ENST00000297518 NMT2O60551 498 aa14.16□□□□□ -0.14
CDK5-201ENST00000297518 ELNP15502 786 aa14.16□□□□□ -0.14
CDK5-201ENST00000297518 IMMTQ16891 758 aaKnown RBP14.16□□□□□ -0.14
CDK5-201ENST00000297518 SKAP1Q86WV1 359 aa14.16□□□□□ -0.14
CDK5-201ENST00000297518 PXYLP1Q8TE99 480 aa14.16□□□□□ -0.14
CDK5-201ENST00000297518 SOCS4Q8WXH5 440 aa14.16□□□□□ -0.14
CDK5-201ENST00000297518 SPATC1LQ9H0A9 340 aa14.16□□□□□ -0.14
CDK5-201ENST00000297518 BIN2Q9UBW5 565 aaPredicted RBP14.16□□□□□ -0.14
CDK5-201ENST00000297518 PPP1R9AQ9ULJ8 1098 aa14.16□□□□□ -0.14
CDK5-201ENST00000297518 NEDD4P46934 1319 aa14.15□□□□□ -0.14
CDK5-201ENST00000297518 MYCP01106 439 aaPredicted RBP14.15□□□□□ -0.14
CDK5-201ENST00000297518 NT5C2P49902 561 aa14.15□□□□□ -0.14
CDK5-201ENST00000297518 UBXN2AP68543 259 aa14.15□□□□□ -0.14
CDK5-201ENST00000297518 BMP2KLQ5H9B9 411 aa14.15□□□□□ -0.14
CDK5-201ENST00000297518 WDR78Q5VTH9 848 aa14.15□□□□□ -0.14
CDK5-201ENST00000297518 SLFN13Q68D06 897 aa14.15□□□□□ -0.14
CDK5-201ENST00000297518 ESR2Q92731 530 aa14.15□□□□□ -0.14
CDK5-201ENST00000297518 NUDT12Q9BQG2 462 aa14.15□□□□□ -0.14
CDK5-201ENST00000297518 SLF1Q9BQI6 1058 aa14.15□□□□□ -0.14
CDK5-201ENST00000297518 TMEM106CQ9BVX2 250 aa14.15□□□□□ -0.14
CDK5-201ENST00000297518 MOV10L1Q9BXT6 1211 aaKnown RBP14.15□□□□□ -0.14
CDK5-201ENST00000297518 TCP11L1Q9NUJ3 509 aa14.15□□□□□ -0.14
CDK5-201ENST00000297518 ADAMTS5Q9UNA0 930 aa14.15□□□□□ -0.14
CDK5-201ENST00000297518 ZNF236Q9UL36 1845 aa14.14□□□□□ -0.15
CDK5-201ENST00000297518 POTEFA5A3E0 1075 aa14.14□□□□□ -0.15
CDK5-201ENST00000297518 VWA5AO00534 786 aa14.14□□□□□ -0.15
CDK5-201ENST00000297518 BMP3P12645 472 aa14.14□□□□□ -0.15
CDK5-201ENST00000297518 NOVP48745 357 aa14.14□□□□□ -0.15
CDK5-201ENST00000297518 PLS1Q14651 629 aa14.14□□□□□ -0.15
CDK5-201ENST00000297518 TMEM132BQ14DG7 1078 aa14.14□□□□□ -0.15
CDK5-201ENST00000297518 MORN1Q5T089 497 aa14.14□□□□□ -0.15
CDK5-201ENST00000297518 SHCBP1Q8NEM2 672 aa14.14□□□□□ -0.15
CDK5-201ENST00000297518 USP6NLQ92738 828 aa14.14□□□□□ -0.15
CDK5-201ENST00000297518 GMCL1Q96IK5 515 aa14.14□□□□□ -0.15
CDK5-201ENST00000297518 IVNS1ABPQ9Y6Y0 642 aa14.14□□□□□ -0.15
CDK5-201ENST00000297518 SLC15A5A6NIM6 579 aa14.13□□□□□ -0.15
CDK5-201ENST00000297518 HMGCRP04035 888 aa14.13□□□□□ -0.15
CDK5-201ENST00000297518 INHAP05111 366 aa14.13□□□□□ -0.15
CDK5-201ENST00000297518 XRCC5P13010 732 aaKnown RBP14.13□□□□□ -0.15
CDK5-201ENST00000297518 CYP2B6P20813 491 aa14.13□□□□□ -0.15
CDK5-201ENST00000297518 PTPREP23469 700 aa14.13□□□□□ -0.15
CDK5-201ENST00000297518 RGS2P41220 211 aa14.13□□□□□ -0.15
CDK5-201ENST00000297518 PTH1RQ03431 593 aa14.13□□□□□ -0.15
CDK5-201ENST00000297518 MTFR1Q15390 333 aa14.13□□□□□ -0.15
CDK5-201ENST00000297518 PRPF38AQ8NAV1 312 aaKnown RBP14.13□□□□□ -0.15
CDK5-201ENST00000297518 REPS2Q8NFH8 660 aa14.13□□□□□ -0.15
CDK5-201ENST00000297518 NKX2-3Q8TAU0 364 aa14.13□□□□□ -0.15
CDK5-201ENST00000297518 MROH8Q9H579 483 aa14.13□□□□□ -0.15
CDK5-201ENST00000297518 FEM1BQ9UK73 627 aa14.13□□□□□ -0.15
CDK5-201ENST00000297518 ISY1Q9ULR0 285 aaKnown RBP14.13□□□□□ -0.15
CDK5-201ENST00000297518 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
CDK5-201ENST00000297518 KDM4AO75164 1064 aa14.12□□□□□ -0.15
CDK5-201ENST00000297518 SLC25A27O95847 323 aa14.12□□□□□ -0.15
CDK5-201ENST00000297518 TOP1P11387 765 aaKnown RBP14.12□□□□□ -0.15
CDK5-201ENST00000297518 CCL5P13501 91 aa14.12□□□□□ -0.15
CDK5-201ENST00000297518 ERCC3P19447 782 aa14.12□□□□□ -0.15
CDK5-201ENST00000297518 SLC1A4P43007 532 aa14.12□□□□□ -0.15
CDK5-201ENST00000297518 MLLT1Q03111 559 aaPredicted RBP14.12□□□□□ -0.15
CDK5-201ENST00000297518 MAP2K5Q13163 448 aa14.12□□□□□ -0.15
CDK5-201ENST00000297518 GRB14Q14449 540 aa14.12□□□□□ -0.15
CDK5-201ENST00000297518 TRMT44Q8IYL2 757 aaKnown RBP14.12□□□□□ -0.15
CDK5-201ENST00000297518 KIFC2Q96AC6 838 aa14.12□□□□□ -0.15
CDK5-201ENST00000297518 APBA2Q99767 749 aa14.12□□□□□ -0.15
CDK5-201ENST00000297518 KRT23Q9C075 422 aa14.12□□□□□ -0.15
CDK5-201ENST00000297518 CNNM2Q9H8M5 875 aa14.12□□□□□ -0.15
CDK5-201ENST00000297518 ZNF214Q9UL59 606 aaPredicted RBP14.12□□□□□ -0.15
CDK5-201ENST00000297518 B4E1Z4 1266 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 TMEM232C9JQI7 657 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 STRNO43815 780 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 ZBED4O75132 1171 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 ZKSCAN1P17029 563 aaPredicted RBP14.11□□□□□ -0.15
CDK5-201ENST00000297518 MCCP23508 829 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 STAT3P40763 770 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 STAT2P52630 851 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 IKQ13123 557 aaPredicted RBP14.11□□□□□ -0.15
CDK5-201ENST00000297518 CCDC178Q5BJE1 867 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 ERICH6BQ5W0A0 696 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 RCSD1Q6JBY9 416 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 FAM160B2Q86V87 743 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 IQCA1Q86XH1 822 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 NCAPG2Q86XI2 1143 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 RIOX2Q8IUF8 465 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 DCAF4Q8WV16 495 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 TRIB2Q92519 343 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 CHMP4CQ96CF2 233 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 TTC14Q96N46 770 aa14.11□□□□□ -0.15
CDK5-201ENST00000297518 TMEM47Q9BQJ4 181 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms