RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ELF2Q15723 593 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 KMT5BQ4FZB7 885 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 PDXDC2PQ6P474 469 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 APTXQ7Z2E3 356 aaKnown RBP11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 EPSTI1Q96J88 318 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 LIMA1Q9UHB6 759 aaKnown RBP11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 PCDHA4Q9UN74 947 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 VWA3AA6NCI4 1184 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 PPP1R3GB7ZBB8 358 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 ZSCAN20P17040 1043 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 SMARCA1P28370 1054 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 CASQ1P31415 396 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 PPP1R2P41236 205 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 CBX1P83916 185 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 BMS1Q14692 1282 aaKnown RBP11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 C12orf60Q5U649 245 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 USP49Q70CQ1 688 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 BLIDQ8IZY5 108 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 CCDC12Q8WUD4 166 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 UBXN4Q92575 508 aa11.34□□□□□ -0.59
TNFRSF11B-201ENST00000297350 RGPD3A6NKT7 1758 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 RGPD4Q7Z3J3 1758 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 A0A087X0B3 334 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 CYP2D7A0A087X1C5 515 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PRDM1O75626 825 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ZNF174Q15697 407 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ZNF658Q5TYW1 1059 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 RCSD1Q6JBY9 416 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 GRAMD1CQ8IYS0 662 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 MKRN1Q9UHC7 482 aaKnown RBP11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 CCNL1Q9UK58 526 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TAOK2Q9UL54 1235 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PARP3Q9Y6F1 533 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 DDX60LQ5H9U9 1706 aaKnown RBP11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 FAM205CA6NFA0 338 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TADA3O75528 432 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 LDHBP07195 334 aaKnown RBP11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PLCG2P16885 1265 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PAK1Q13153 545 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 KCNB1Q14721 858 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 EARS2Q5JPH6 523 aaKnown RBP11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 JAKMIP3Q5VZ66 844 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 FBXO38Q6PIJ6 1188 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 AEBP2Q6ZN18 517 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ZNF804AQ7Z570 1209 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TRMT44Q8IYL2 757 aaKnown RBP11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 IGSF22Q8N9C0 903 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 NOC3LQ8WTT2 800 aaKnown RBP11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 AK8Q96MA6 479 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 MED15Q96RN5 788 aa11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 SAMSN1Q9NSI8 373 aaKnown RBP11.33□□□□□ -0.6
TNFRSF11B-201ENST00000297350 MFAP3LO75121 409 aa11.32□□□□□ -0.6
TNFRSF11B-201ENST00000297350 KIF20AO95235 890 aa11.32□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ZNF827Q17R98 1081 aa11.32□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PIK3AP1Q6ZUJ8 805 aa11.32□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PTF1AQ7RTS3 328 aa11.32□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TMTC1Q8IUR5 882 aa11.32□□□□□ -0.6
TNFRSF11B-201ENST00000297350 SEPT12Q8IYM1 358 aa11.32□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
TNFRSF11B-201ENST00000297350 MCM9Q9NXL9 1143 aa11.32□□□□□ -0.6
TNFRSF11B-201ENST00000297350 MYO1AQ9UBC5 1043 aa11.32□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TTF2Q9UNY4 1162 aaKnown RBP11.32□□□□□ -0.6
TNFRSF11B-201ENST00000297350 RTCBQ9Y3I0 505 aaKnown RBP11.32□□□□□ -0.6
TNFRSF11B-201ENST00000297350 XDHP47989 1333 aa11.32□□□□□ -0.6
TNFRSF11B-201ENST00000297350 H7C1D1 291 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 hCG_1984214I3L0E3 225 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 AFMP43652 599 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 MAP3K9P80192 1104 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 STIM1Q13586 685 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ZNF713Q8N859 430 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 CCSER1Q9C0I3 900 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 CCDC194A0A1B0GVG4 234 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 URI1O94763 535 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ADRA2BP18089 450 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 PRDX5P30044 214 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 USP5P45974 858 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 GNG11P61952 73 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 GRAPQ13588 217 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 SLF2Q8IX21 1173 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 GPR161Q8N6U8 529 aaKnown RBP11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 C4orf32Q8N8J7 132 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 GRAPLQ8TC17 118 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 CCDC47Q96A33 483 aaKnown RBP11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 SPZ1Q9BXG8 430 aa11.31□□□□□ -0.6
TNFRSF11B-201ENST00000297350 C10orf71Q711Q0 1435 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 POTEB2H3BUK9 544 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 M0R2N6 131 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 RPN1P04843 607 aaKnown RBP11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 HMGB2P26583 209 aaKnown RBP11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 EEF1GP26641 437 aaKnown RBP11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TM4SF1P30408 202 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 STAT6P42226 847 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 TFAP4Q01664 338 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 NAA30Q147X3 362 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 ARHGAP29Q52LW3 1261 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 WWC2Q6AWC2 1192 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 DTHD1Q6ZMT9 781 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 RASGRP2Q7LDG7 609 aa11.3□□□□□ -0.6
TNFRSF11B-201ENST00000297350 IQCDQ96DY2 449 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms