RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 VCPKMTQ9H867 229 aa12.71□□□□□ -0.37
RFC4-201ENST00000296273 DNAH12Q6ZR08 3092 aa12.71□□□□□ -0.37
RFC4-201ENST00000296273 ZNF532Q9HCE3 1301 aa12.71□□□□□ -0.38
RFC4-201ENST00000296273 MYCNP04198 464 aaPredicted RBP12.7□□□□□ -0.38
RFC4-201ENST00000296273 RARBP10826 455 aa12.7□□□□□ -0.38
RFC4-201ENST00000296273 PDE4AP27815 886 aa12.7□□□□□ -0.38
RFC4-201ENST00000296273 ANP32AP39687 249 aaKnown RBP12.7□□□□□ -0.38
RFC4-201ENST00000296273 ICA1Q05084 483 aa12.7□□□□□ -0.38
RFC4-201ENST00000296273 FAM47AQ5JRC9 791 aa12.7□□□□□ -0.38
RFC4-201ENST00000296273 C9orf50Q5SZB4 431 aa12.7□□□□□ -0.38
RFC4-201ENST00000296273 RNF180Q86T96 592 aa12.7□□□□□ -0.38
RFC4-201ENST00000296273 AMOTL1Q8IY63 956 aa12.7□□□□□ -0.38
RFC4-201ENST00000296273 CLASRPQ8N2M8 674 aaKnown RBP12.7□□□□□ -0.38
RFC4-201ENST00000296273 MAFAQ8NHW3 353 aaPredicted RBP12.7□□□□□ -0.38
RFC4-201ENST00000296273 SDR42E1Q8WUS8 393 aa12.7□□□□□ -0.38
RFC4-201ENST00000296273 ATG4CQ96DT6 458 aa12.7□□□□□ -0.38
RFC4-201ENST00000296273 ATP8A2Q9NTI2 1148 aa12.7□□□□□ -0.38
RFC4-201ENST00000296273 PHF24Q9UPV7 400 aa12.7□□□□□ -0.38
RFC4-201ENST00000296273 EXOC6BQ9Y2D4 811 aa12.7□□□□□ -0.38
RFC4-201ENST00000296273 DIS3Q9Y2L1 958 aaKnown RBP12.7□□□□□ -0.38
RFC4-201ENST00000296273 ROBO3Q96MS0 1386 aa12.7□□□□□ -0.38
RFC4-201ENST00000296273 COPB2P35606 906 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 KIAA1755Q5JYT7 1200 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 PRAMEF19Q5SWL8 479 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 RIOX2Q8IUF8 465 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 RHPN1Q8TCX5 695 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 XPNPEP3Q9NQH7 507 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 ADAMTS5Q9UNA0 930 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 TCRBV5S4A2TA0A5A2 114 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 TRIM43BA6NCK2 446 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 CLTBP09497 229 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 RLBP1P12271 317 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 TLE2Q04725 743 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 KCTD2Q14681 263 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 TMEM132BQ14DG7 1078 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 SPICE1Q8N0Z3 855 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 LCORLQ8N3X6 602 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 SLC44A5Q8NCS7 719 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 SYMPKQ92797 1274 aaKnown RBP12.69□□□□□ -0.38
RFC4-201ENST00000296273 FERMT2Q96AC1 680 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 TRIM43Q96BQ3 446 aaPredicted RBP12.69□□□□□ -0.38
RFC4-201ENST00000296273 KIF1BPQ96EK5 621 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 MMP19Q99542 508 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 TINF2Q9BSI4 451 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 IL1RAPL2Q9NP60 686 aa12.69□□□□□ -0.38
RFC4-201ENST00000296273 GOLIM4O00461 696 aa12.68□□□□□ -0.38
RFC4-201ENST00000296273 IFIT2P09913 472 aaKnown RBP12.68□□□□□ -0.38
RFC4-201ENST00000296273 AKR1A1P14550 325 aa12.68□□□□□ -0.38
RFC4-201ENST00000296273 AKR1B1P15121 316 aa12.68□□□□□ -0.38
RFC4-201ENST00000296273 RAG1P15918 1043 aa12.68□□□□□ -0.38
RFC4-201ENST00000296273 EVX2Q03828 476 aa12.68□□□□□ -0.38
RFC4-201ENST00000296273 SH3RF1Q7Z6J0 888 aa12.68□□□□□ -0.38
RFC4-201ENST00000296273 SIAH1Q8IUQ4 282 aa12.68□□□□□ -0.38
RFC4-201ENST00000296273 MSL3Q8N5Y2 521 aaKnown RBP12.68□□□□□ -0.38
RFC4-201ENST00000296273 DYNLL2Q96FJ2 89 aa12.68□□□□□ -0.38
RFC4-201ENST00000296273 RNPC3Q96LT9 517 aaKnown RBP12.68□□□□□ -0.38
RFC4-201ENST00000296273 DNAJC2Q99543 621 aaKnown RBP12.68□□□□□ -0.38
RFC4-201ENST00000296273 TSEN34Q9BSV6 310 aaKnown RBP12.68□□□□□ -0.38
RFC4-201ENST00000296273 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.68□□□□□ -0.387e-9■■□□□ 11.5
RFC4-201ENST00000296273 TTYH1Q9H313 450 aaPredicted RBP12.68□□□□□ -0.38
RFC4-201ENST00000296273 KANSL2Q9H9L4 492 aa12.68□□□□□ -0.38
RFC4-201ENST00000296273 GOPCQ9HD26 462 aa12.68□□□□□ -0.38
RFC4-201ENST00000296273 ZBTB40Q9NUA8 1239 aa12.68□□□□□ -0.38
RFC4-201ENST00000296273 KIAA0355O15063 1070 aa12.67□□□□□ -0.38
RFC4-201ENST00000296273 CYP2D6P10635 497 aa12.67□□□□□ -0.38
RFC4-201ENST00000296273 FOSL2P15408 326 aa12.67□□□□□ -0.38
RFC4-201ENST00000296273 STAT3P40763 770 aa12.67□□□□□ -0.38
RFC4-201ENST00000296273 CDK8P49336 464 aa12.67□□□□□ -0.38
RFC4-201ENST00000296273 ZNF792Q3KQV3 632 aa12.67□□□□□ -0.38
RFC4-201ENST00000296273 C12orf60Q5U649 245 aa12.67□□□□□ -0.38
RFC4-201ENST00000296273 NUP133Q8WUM0 1156 aa12.67□□□□□ -0.38
RFC4-201ENST00000296273 MYLIPQ8WY64 445 aa12.67□□□□□ -0.38
RFC4-201ENST00000296273 TOX2Q96NM4 488 aa12.67□□□□□ -0.38
RFC4-201ENST00000296273 ARMT1Q9H993 441 aa12.67□□□□□ -0.38
RFC4-201ENST00000296273 CNPY2Q9Y2B0 182 aa12.67□□□□□ -0.38
RFC4-201ENST00000296273 LAMA2P24043 3122 aaKnown RBP12.66□□□□□ -0.38
RFC4-201ENST00000296273 A0A1W2PQ45 241 aaPredicted RBP12.66□□□□□ -0.38
RFC4-201ENST00000296273 A0A1W2PQY0 241 aa12.66□□□□□ -0.38
RFC4-201ENST00000296273 VWA5AO00534 786 aa12.66□□□□□ -0.38
RFC4-201ENST00000296273 HMMRO75330 724 aa12.66□□□□□ -0.38
RFC4-201ENST00000296273 IGHDP01880 384 aa12.66□□□□□ -0.38
RFC4-201ENST00000296273 ZNF865P0CJ78 1059 aaPredicted RBP12.66□□□□□ -0.38
RFC4-201ENST00000296273 EEF2P13639 858 aaKnown RBP12.66□□□□□ -0.38
RFC4-201ENST00000296273 ADD2P35612 726 aa12.66□□□□□ -0.38
RFC4-201ENST00000296273 FPGSQ05932 587 aa12.66□□□□□ -0.38
RFC4-201ENST00000296273 SAMD1Q6SPF0 538 aaPredicted RBP12.66□□□□□ -0.38
RFC4-201ENST00000296273 C16orf86Q6ZW13 317 aa12.66□□□□□ -0.38
RFC4-201ENST00000296273 ANKRD33Q7Z3H0 272 aa12.66□□□□□ -0.38
RFC4-201ENST00000296273 RPAP2Q8IXW5 612 aaPredicted RBP12.66□□□□□ -0.38
RFC4-201ENST00000296273 TMEM39AQ9NV64 488 aa12.66□□□□□ -0.38
RFC4-201ENST00000296273 PAG1Q9NWQ8 432 aa12.66□□□□□ -0.38
RFC4-201ENST00000296273 ZNF214Q9UL59 606 aaPredicted RBP12.66□□□□□ -0.38
RFC4-201ENST00000296273 PPP1R9AQ9ULJ8 1098 aa12.66□□□□□ -0.38
RFC4-201ENST00000296273 PARP14Q460N5 1801 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 MYH8P13535 1937 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.65□□□□□ -0.38
RFC4-201ENST00000296273 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.65□□□□□ -0.38
RFC4-201ENST00000296273 MOXD2PA6NHM9 499 aa12.65□□□□□ -0.38
RFC4-201ENST00000296273 DCDC2CA8MYV0 355 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms