RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 FOXD4L1Q9NU39 408 aa20.71■□□□□ 0.91
CCDC78-201ENST00000293889 MAD2L2Q9UI95 211 aa20.71■□□□□ 0.91
CCDC78-201ENST00000293889 AFG3L2Q9Y4W6 797 aa20.71■□□□□ 0.91
CCDC78-201ENST00000293889 USP17L10C9JJH3 530 aa20.7■□□□□ 0.9
CCDC78-201ENST00000293889 AOC2O75106 756 aa20.7■□□□□ 0.9
CCDC78-201ENST00000293889 CTDNEP1O95476 244 aa20.7■□□□□ 0.9
CCDC78-201ENST00000293889 NDUFB10O96000 172 aa20.7■□□□□ 0.9
CCDC78-201ENST00000293889 PPP2R5BQ15173 497 aa20.7■□□□□ 0.9
CCDC78-201ENST00000293889 ZYXQ15942 572 aaKnown RBP20.7■□□□□ 0.9
CCDC78-201ENST00000293889 ERO1BQ86YB8 467 aa20.7■□□□□ 0.9
CCDC78-201ENST00000293889 STAG2Q8N3U4 1231 aa20.7■□□□□ 0.9
CCDC78-201ENST00000293889 CCDC102AQ96A19 550 aa20.7■□□□□ 0.9
CCDC78-201ENST00000293889 ZIC5Q96T25 663 aa20.7■□□□□ 0.9
CCDC78-201ENST00000293889 VCPKMTQ9H867 229 aa20.7■□□□□ 0.9
CCDC78-201ENST00000293889 GOPCQ9HD26 462 aa20.7■□□□□ 0.9
CCDC78-201ENST00000293889 CCDC196A0A1B0GTZ2 297 aa20.69■□□□□ 0.9
CCDC78-201ENST00000293889 PALM3A6NDB9 673 aaPredicted RBP20.69■□□□□ 0.9
CCDC78-201ENST00000293889 SPDYE5A6NIY4 337 aa20.69■□□□□ 0.9
CCDC78-201ENST00000293889 TRIM75PA6NK02 468 aa20.69■□□□□ 0.9
CCDC78-201ENST00000293889 DHX16O60231 1041 aaKnown RBP20.69■□□□□ 0.9
CCDC78-201ENST00000293889 HSP90AA1P07900 732 aaKnown RBP20.69■□□□□ 0.9
CCDC78-201ENST00000293889 PARP1P09874 1014 aaKnown RBP20.69■□□□□ 0.9
CCDC78-201ENST00000293889 GOLGA8HP0CJ92 632 aa20.69■□□□□ 0.9
CCDC78-201ENST00000293889 KIF5BP33176 963 aa20.69■□□□□ 0.9
CCDC78-201ENST00000293889 BACE1P56817 501 aa20.69■□□□□ 0.9
CCDC78-201ENST00000293889 MKRN3Q13064 507 aaKnown RBP20.69■□□□□ 0.9
CCDC78-201ENST00000293889 MTMR2Q13614 643 aa20.69■□□□□ 0.9
CCDC78-201ENST00000293889 SPRYD7Q5W111 196 aa20.69■□□□□ 0.9
CCDC78-201ENST00000293889 SPICE1Q8N0Z3 855 aa20.69■□□□□ 0.9
CCDC78-201ENST00000293889 OPTNQ96CV9 577 aa20.69■□□□□ 0.9
CCDC78-201ENST00000293889 WNK4Q96J92 1243 aa20.69■□□□□ 0.9
CCDC78-201ENST00000293889 RBM28Q9NW13 759 aaKnown RBP20.69■□□□□ 0.9
CCDC78-201ENST00000293889 PTPRFP10586 1907 aa20.69■□□□□ 0.9
CCDC78-201ENST00000293889 CPLX1O14810 134 aa20.68■□□□□ 0.9
CCDC78-201ENST00000293889 PLEKHA8P1O95397 391 aa20.68■□□□□ 0.9
CCDC78-201ENST00000293889 PPATQ06203 517 aa20.68■□□□□ 0.9
CCDC78-201ENST00000293889 NTRK3Q16288 839 aa20.68■□□□□ 0.9
CCDC78-201ENST00000293889 CMTR1Q8N1G2 835 aaKnown RBP20.68■□□□□ 0.9
CCDC78-201ENST00000293889 DCAF4Q8WV16 495 aa20.68■□□□□ 0.9
CCDC78-201ENST00000293889 OTUD5Q96G74 571 aa20.68■□□□□ 0.9
CCDC78-201ENST00000293889 INTS4Q96HW7 963 aaKnown RBP20.68■□□□□ 0.9
CCDC78-201ENST00000293889 GMCL1Q96IK5 515 aa20.68■□□□□ 0.9
CCDC78-201ENST00000293889 FRMPD2Q68DX3 1309 aaPredicted RBP20.68■□□□□ 0.9
CCDC78-201ENST00000293889 SLC1A4P43007 532 aa20.67■□□□□ 0.9
CCDC78-201ENST00000293889 ZNF543Q08ER8 600 aa20.67■□□□□ 0.9
CCDC78-201ENST00000293889 DGKZQ13574 1117 aa20.67■□□□□ 0.9
CCDC78-201ENST00000293889 TMTC3Q6ZXV5 915 aa20.67■□□□□ 0.9
CCDC78-201ENST00000293889 NUP88Q99567 741 aaPredicted RBP20.67■□□□□ 0.9
CCDC78-201ENST00000293889 LLPHQ9BRT6 129 aaKnown RBP20.67■□□□□ 0.9
CCDC78-201ENST00000293889 JAK2O60674 1132 aa20.67■□□□□ 0.9
CCDC78-201ENST00000293889 CCDC96Q2M329 555 aa20.67■□□□□ 0.9
CCDC78-201ENST00000293889 ASPRV1Q53RT3 343 aa20.67■□□□□ 0.9
CCDC78-201ENST00000293889 KCTD1Q719H9 257 aa20.67■□□□□ 0.9
CCDC78-201ENST00000293889 NSUN7Q8NE18 718 aaKnown RBP20.67■□□□□ 0.9
CCDC78-201ENST00000293889 GPCPD1Q9NPB8 672 aa20.67■□□□□ 0.9
CCDC78-201ENST00000293889 EMILIN3Q9NT22 766 aa20.67■□□□□ 0.9
CCDC78-201ENST00000293889 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.67■□□□□ 0.9
CCDC78-201ENST00000293889 KLRF2D3W0D1 207 aa20.66■□□□□ 0.9
CCDC78-201ENST00000293889 PPFIA3O75145 1194 aa20.66■□□□□ 0.9
CCDC78-201ENST00000293889 ZBTB48P10074 688 aaPredicted RBP20.66■□□□□ 0.9
CCDC78-201ENST00000293889 USP14P54578 494 aa20.66■□□□□ 0.9
CCDC78-201ENST00000293889 FUT2Q10981 343 aa20.66■□□□□ 0.9
CCDC78-201ENST00000293889 NOGQ13253 232 aa20.66■□□□□ 0.9
CCDC78-201ENST00000293889 PPIL2Q13356 520 aa20.66■□□□□ 0.9
CCDC78-201ENST00000293889 CPLX2Q6PUV4 134 aaKnown RBP20.66■□□□□ 0.9
CCDC78-201ENST00000293889 CCDC82Q8N4S0 544 aa20.66■□□□□ 0.9
CCDC78-201ENST00000293889 SRBD1Q8N5C6 995 aaKnown RBP20.66■□□□□ 0.9
CCDC78-201ENST00000293889 PTPDC1A2A3K4 754 aa20.65■□□□□ 0.9
CCDC78-201ENST00000293889 C19orf81C9J6K1 198 aa20.65■□□□□ 0.9
CCDC78-201ENST00000293889 IRF6O14896 467 aa20.65■□□□□ 0.9
CCDC78-201ENST00000293889 BMP3P12645 472 aa20.65■□□□□ 0.9
CCDC78-201ENST00000293889 IFNAR1P17181 557 aa20.65■□□□□ 0.9
CCDC78-201ENST00000293889 GNAQP50148 359 aa20.65■□□□□ 0.9
CCDC78-201ENST00000293889 HMGCS2P54868 508 aa20.65■□□□□ 0.9
CCDC78-201ENST00000293889 GPATCH4Q5T3I0 446 aaKnown RBP20.65■□□□□ 0.9
CCDC78-201ENST00000293889 TTBK2Q6IQ55 1244 aa20.65■□□□□ 0.9
CCDC78-201ENST00000293889 NBPF11Q86T75 865 aa20.65■□□□□ 0.9
CCDC78-201ENST00000293889 SMARCC2Q8TAQ2 1214 aa20.65■□□□□ 0.9
CCDC78-201ENST00000293889 CPVLQ9H3G5 476 aa20.65■□□□□ 0.9
CCDC78-201ENST00000293889 CDKL5O76039 1030 aa20.64■□□□□ 0.9
CCDC78-201ENST00000293889 KIF23Q02241 960 aaPredicted RBP20.64■□□□□ 0.9
CCDC78-201ENST00000293889 SLC35G1Q2M3R5 365 aa20.64■□□□□ 0.9
CCDC78-201ENST00000293889 FAM83BQ5T0W9 1011 aa20.64■□□□□ 0.9
CCDC78-201ENST00000293889 LPAR1Q92633 364 aa20.64■□□□□ 0.9
CCDC78-201ENST00000293889 PHKBQ93100 1093 aa20.64■□□□□ 0.9
CCDC78-201ENST00000293889 LZTS2Q9BRK4 669 aa20.64■□□□□ 0.9
CCDC78-201ENST00000293889 ISY1Q9ULR0 285 aaKnown RBP20.64■□□□□ 0.9
CCDC78-201ENST00000293889 SMC3Q9UQE7 1217 aa20.64■□□□□ 0.9
CCDC78-201ENST00000293889 CXCL11O14625 94 aa20.64■□□□□ 0.89
CCDC78-201ENST00000293889 DDX11Q96FC9 970 aa20.64■□□□□ 0.89
CCDC78-201ENST00000293889 C12orf42Q96LP6 360 aa20.64■□□□□ 0.89
CCDC78-201ENST00000293889 UBA5Q9GZZ9 404 aa20.64■□□□□ 0.89
CCDC78-201ENST00000293889 KCNH4Q9UQ05 1017 aa20.64■□□□□ 0.89
CCDC78-201ENST00000293889 VCAM1P19320 739 aa20.63■□□□□ 0.89
CCDC78-201ENST00000293889 MAP2K2P36507 400 aa20.63■□□□□ 0.89
CCDC78-201ENST00000293889 SH3D19Q5HYK7 790 aa20.63■□□□□ 0.89
CCDC78-201ENST00000293889 CHMP5Q9NZZ3 219 aa20.63■□□□□ 0.89
CCDC78-201ENST00000293889 TMEM232C9JQI7 657 aa20.62■□□□□ 0.89
CCDC78-201ENST00000293889 WDR46O15213 610 aaKnown RBP20.62■□□□□ 0.89
CCDC78-201ENST00000293889 CYTH3O43739 400 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms