RNA–Protein interactions for RNA: ENST00000291503.9

ATP13A1-201, Transcript of ATPase 13A1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATP13A1, Length 3,483 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-201ENST00000291503 UBXN1Q04323 297 aa12.38□□□□□ -0.43
ATP13A1-201ENST00000291503 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
ATP13A1-201ENST00000291503 ZNF804AQ7Z570 1209 aa12.38□□□□□ -0.43
ATP13A1-201ENST00000291503 CCDC47Q96A33 483 aaKnown RBP12.38□□□□□ -0.43
ATP13A1-201ENST00000291503 GDAQ9Y2T3 454 aa12.38□□□□□ -0.43
ATP13A1-201ENST00000291503 SPATA31A5Q5VU36 1347 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 SPATA31A7Q8IWB4 1347 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 KIF5CO60282 957 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 CD44P16070 742 aaKnown RBP12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 IRX3P78415 501 aaPredicted RBP12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 STIM1Q13586 685 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 WDR66Q8TBY9 1149 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 NELFBQ8WX92 580 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 TCP11L1Q9NUJ3 509 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 ZNF219Q9P2Y4 722 aaPredicted RBP12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 RPS6KA4O75676 772 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 MDM2Q00987 491 aaPredicted RBP12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 BMS1Q14692 1282 aaKnown RBP12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 ZNF569Q5MCW4 686 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 USP17L2Q6R6M4 530 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 RASGRP2Q7LDG7 609 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 TRIML1Q8N9V2 468 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 CDK5RAP3Q96JB5 506 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 ATRNO75882 1429 aa12.37□□□□□ -0.43
ATP13A1-201ENST00000291503 KLRF2D3W0D1 207 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 CCNT1O60563 726 aaKnown RBP12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 IDEP14735 1019 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 INTS13Q9NVM9 706 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 RNF216Q9NWF9 866 aaPredicted RBP12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 ANAPC4Q9UJX5 808 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 PAK1Q13153 545 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 CTAGE1Q96RT6 745 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 ZNF446Q9NWS9 450 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 ERCC5P28715 1186 aaPredicted RBP12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 GNAQP50148 359 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 GSTO1P78417 241 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 MFSD14BQ5SR56 506 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 GSDMAQ96QA5 445 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 WDR24Q96S15 920 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 EYA3Q99504 573 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 USP21Q9UK80 565 aa12.36□□□□□ -0.43
ATP13A1-201ENST00000291503 STX10O60499 249 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 BTDP43251 543 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 ASIC1P78348 528 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 RGS22Q8NE09 1264 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 SHISA4Q96DD7 197 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 ZNF287Q9HBT7 754 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 LAMB4A4D0S4 1761 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 SEMA3EO15041 775 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 ADAMTS3O15072 1205 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 IPO7O95373 1038 aaKnown RBP12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 KRT9P35527 623 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 TXKP42681 527 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 LAMA4Q16363 1823 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 GRIK5Q16478 980 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 PFKFB3Q16875 520 aaPredicted RBP12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 FRMPD2Q68DX3 1309 aaPredicted RBP12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 TC2NQ8N9U0 490 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 CNTNAP5Q8WYK1 1306 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 MTA3Q9BTC8 594 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 GPCPD1Q9NPB8 672 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 BIN2Q9UBW5 565 aaPredicted RBP12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 ABCC6O95255 1503 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 TRIM49BA6NDI0 452 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 WWC2Q6AWC2 1192 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 CCDC148Q8NFR7 591 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 SLF1Q9BQI6 1058 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 ZHX3Q9H4I2 956 aa12.35□□□□□ -0.43
ATP13A1-201ENST00000291503 RPN1P04843 607 aaKnown RBP12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 PARP1P09874 1014 aaKnown RBP12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 PPP2R3AQ06190 1150 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 RAD51AP2Q09MP3 1159 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 SRRTQ9BXP5 876 aaKnown RBP12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 TMX4Q9H1E5 349 aaPredicted RBP12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 TJP1Q07157 1748 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 GOLGA6L9A6NEM1 432 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 SMCO2A6NFE2 343 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 TECP42680 631 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 MTIF2P46199 727 aaKnown RBP12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 RBM5P52756 815 aaKnown RBP eCLIP12.34□□□□□ -0.434e-13■■■□□ 17.9
ATP13A1-201ENST00000291503 RCAN1P53805 252 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 GTF2IP78347 998 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 TEX2Q8IWB9 1127 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 ZSCAN29Q8IWY8 852 aaPredicted RBP12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 RMND1Q9NWS8 449 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 GUCA1BQ9UMX6 200 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 KCNJ18B7U540 433 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 SEC31AO94979 1220 aaKnown RBP12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 PCP11498 1178 aaKnown RBP12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 CLCN6P51797 869 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 ATP2C1P98194 919 aaPredicted RBP12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 IKQ13123 557 aaPredicted RBP12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 KCNJ12Q14500 433 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 CCDC96Q2M329 555 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 C10orf67Q8IYJ2 551 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 ACRBPQ8NEB7 543 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 TMEM47Q9BQJ4 181 aa12.34□□□□□ -0.43
ATP13A1-201ENST00000291503 GGA1Q9UJY5 639 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms