RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 KRT25Q7Z3Z0 450 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 ACRBPQ8NEB7 543 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 ZC3H12CQ9C0D7 883 aaKnown RBP16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 PLCB1Q9NQ66 1216 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 TSKSQ9UJT2 592 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 B4DLN1 442 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 NOL3O60936 208 aaKnown RBP16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 CLCN6P51797 869 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 IFNL3Q8IZI9 196 aa16.96■□□□□ 0.31
SHROOM4-201ENST00000289292 RGS16O15492 202 aaPredicted RBP16.96■□□□□ 0.3
SHROOM4-201ENST00000289292 GOLGA8HP0CJ92 632 aa16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 SRGAP1Q7Z6B7 1085 aa16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 ADORA1P30542 326 aa16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 TSNAXIP1Q2TAA8 658 aa16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 FNBP4Q8N3X1 1017 aaPredicted RBP16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 TXNDC9O14530 226 aa16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 FLOT1O75955 427 aa16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 POLR2FP61218 127 aaKnown RBP16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 MAP4K1Q92918 833 aa16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 ZSCAN10Q96SZ4 725 aaPredicted RBP16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 SMCO2A6NFE2 343 aa16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 SYCE1Q8N0S2 351 aa16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 VPS37BQ9H9H4 285 aa16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 RASSF7Q02833 373 aa16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 PCDHA5Q9Y5H7 936 aa16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 ATP7AQ04656 1500 aa16.95■□□□□ 0.3
SHROOM4-201ENST00000289292 NDC80O14777 642 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 RPSAP08865 295 aaKnown RBP16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 COPB1P53618 953 aaKnown RBP16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 PPP2R5DQ14738 602 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 SPATA1Q5VX52 437 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 ORAI2Q96SN7 254 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 DNM3Q9UQ16 869 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 ARHGEF35A5YM69 484 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 EXOC3O60645 756 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 VPS41P49754 854 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 GUCY2DQ02846 1103 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 TTLL7Q6ZT98 887 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 NSUN7Q8NE18 718 aaKnown RBP16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 RAB3IL1Q8TBN0 382 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 KRT12Q99456 494 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 CLUL1Q15846 466 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 TMCO4Q5TGY1 634 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 FBXO38Q6PIJ6 1188 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 PROCA1Q8NCQ7 364 aaPredicted RBP16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 RTEL1Q9NZ71 1219 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 AMFRQ9UKV5 643 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 EPN1Q9Y6I3 576 aaPredicted RBP16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 PBRM1Q86U86 1689 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 RNF40O75150 1001 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 CXCR5P32302 372 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 NAP1L4Q99733 375 aaKnown RBP16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 RTCBQ9Y3I0 505 aaKnown RBP16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 MYOM2P54296 1465 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 CYP2J2P51589 502 aa16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 MRPS9P82933 396 aaKnown RBP16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 DDX23Q9BUQ8 820 aaKnown RBP16.94■□□□□ 0.3
SHROOM4-201ENST00000289292 A6NNZ2 444 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 TUBB8Q3ZCM7 444 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 CCDC170Q8IYT3 715 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 SH3TC1Q8TE82 1336 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 KDM5DQ9BY66 1539 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 GNPATO15228 680 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 TRAF1Q13077 416 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 CUL4AQ13619 759 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 PSMD6Q15008 389 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 CCDC62Q6P9F0 684 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 STAP2Q9UGK3 403 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 HDAC9Q9UKV0 1011 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 ABCA5Q8WWZ7 1642 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 PRAMEF22A3QJZ6 481 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 CYP21A2P08686 494 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 MYCLP12524 364 aaPredicted RBP16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 SESN3P58005 492 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 LIN9Q5TKA1 542 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 RPAINQ86UA6 219 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 MAN1B1Q9UKM7 699 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 TCP10Q12799 353 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 GPBP1Q86WP2 473 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 PUS3Q9BZE2 481 aaKnown RBP16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 STX2P32856 288 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 PPM1FP49593 454 aaPredicted RBP16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 DNAJC10Q8IXB1 793 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 BLIDQ8IZY5 108 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 TAB3Q8N5C8 712 aaPredicted RBP16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 RNF10Q8N5U6 811 aaKnown RBP16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 PARD6BQ9BYG5 372 aa16.93■□□□□ 0.3
SHROOM4-201ENST00000289292 PABPN1LA6NDY0 278 aaKnown RBP16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 PTGDRQ13258 359 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 FANCBQ8NB91 859 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 CFAP57Q96MR6 1250 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 CDC23Q9UJX2 597 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 DISP1Q96F81 1524 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 STX10O60499 249 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 BCAMP50895 628 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 CCDC110Q8TBZ0 833 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 RABGGTAQ92696 567 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 KIFC2Q96AC6 838 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 USP17L12C9JPN9 530 aa16.92■□□□□ 0.3
SHROOM4-201ENST00000289292 USP17L21D6R901 530 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms