RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 FBXO28Q9NVF7 368 aa29.69■■■□□ 2.34
PDF-201ENST00000288022 ISY1Q9ULR0 285 aaKnown RBP29.69■■■□□ 2.34
PDF-201ENST00000288022 SOX10P56693 466 aa29.68■■■□□ 2.34
PDF-201ENST00000288022 SLFN13Q68D06 897 aa29.68■■■□□ 2.34
PDF-201ENST00000288022 MB21D1Q8N884 522 aa29.68■■■□□ 2.34
PDF-201ENST00000288022 ARMC5Q96C12 935 aa29.68■■■□□ 2.34
PDF-201ENST00000288022 RLFQ13129 1914 aa29.68■■■□□ 2.34
PDF-201ENST00000288022 PARP14Q460N5 1801 aa29.67■■■□□ 2.34
PDF-201ENST00000288022 GRK4P32298 578 aa29.67■■■□□ 2.34
PDF-201ENST00000288022 PLS1Q14651 629 aa29.67■■■□□ 2.34
PDF-201ENST00000288022 A0A0G2JMZ2 1700 aa29.67■■■□□ 2.34
PDF-201ENST00000288022 KIAA1211Q6ZU35 1233 aa29.66■■■□□ 2.34
PDF-201ENST00000288022 CHMP4CQ96CF2 233 aa29.66■■■□□ 2.34
PDF-201ENST00000288022 BIN2Q9UBW5 565 aaPredicted RBP29.66■■■□□ 2.34
PDF-201ENST00000288022 PPP1R9AQ9ULJ8 1098 aa29.66■■■□□ 2.34
PDF-201ENST00000288022 U3KPZ7 1027 aaPredicted RBP29.66■■■□□ 2.34
PDF-201ENST00000288022 ADCY3O60266 1144 aa29.65■■■□□ 2.34
PDF-201ENST00000288022 MYCP01106 439 aaPredicted RBP29.65■■■□□ 2.34
PDF-201ENST00000288022 GPR142Q7Z601 462 aa29.65■■■□□ 2.34
PDF-201ENST00000288022 PLEKHH3Q7Z736 793 aa29.65■■■□□ 2.34
PDF-201ENST00000288022 SLF1Q9BQI6 1058 aa29.65■■■□□ 2.34
PDF-201ENST00000288022 TCP11L1Q9NUJ3 509 aa29.65■■■□□ 2.34
PDF-201ENST00000288022 MTMR7Q9Y216 660 aa29.65■■■□□ 2.34
PDF-201ENST00000288022 KDM4AO75164 1064 aa29.64■■■□□ 2.34
PDF-201ENST00000288022 BMP3P12645 472 aa29.64■■■□□ 2.34
PDF-201ENST00000288022 IRF5Q13568 498 aa29.64■■■□□ 2.34
PDF-201ENST00000288022 SLAIN1Q8ND83 568 aa29.64■■■□□ 2.34
PDF-201ENST00000288022 ZNF333Q96JL9 665 aa29.64■■■□□ 2.34
PDF-201ENST00000288022 ESYT1Q9BSJ8 1104 aa29.64■■■□□ 2.34
PDF-201ENST00000288022 SPATC1LQ9H0A9 340 aa29.64■■■□□ 2.34
PDF-201ENST00000288022 B4E1Z4 1266 aa29.63■■■□□ 2.33
PDF-201ENST00000288022 SLC1A4P43007 532 aa29.63■■■□□ 2.33
PDF-201ENST00000288022 CASC1Q6TDU7 716 aa29.63■■■□□ 2.33
PDF-201ENST00000288022 NKX2-3Q8TAU0 364 aa29.63■■■□□ 2.33
PDF-201ENST00000288022 NUDT12Q9BQG2 462 aa29.63■■■□□ 2.33
PDF-201ENST00000288022 ZKSCAN3Q9BRR0 538 aa29.63■■■□□ 2.33
PDF-201ENST00000288022 MOV10L1Q9BXT6 1211 aaKnown RBP29.63■■■□□ 2.33
PDF-201ENST00000288022 KRT23Q9C075 422 aa29.63■■■□□ 2.33
PDF-201ENST00000288022 CNNM2Q9H8M5 875 aa29.63■■■□□ 2.33
PDF-201ENST00000288022 GJD2Q9UKL4 321 aa29.63■■■□□ 2.33
PDF-201ENST00000288022 TOP1P11387 765 aaKnown RBP29.62■■■□□ 2.33
PDF-201ENST00000288022 ELNP15502 786 aa29.62■■■□□ 2.33
PDF-201ENST00000288022 MCCP23508 829 aa29.62■■■□□ 2.33
PDF-201ENST00000288022 NT5C2P49902 561 aa29.62■■■□□ 2.33
PDF-201ENST00000288022 SOCS4Q8WXH5 440 aa29.62■■■□□ 2.33
PDF-201ENST00000288022 KIFC2Q96AC6 838 aa29.62■■■□□ 2.33
PDF-201ENST00000288022 GMCL1Q96IK5 515 aa29.62■■■□□ 2.33
PDF-201ENST00000288022 FEM1BQ9UK73 627 aa29.62■■■□□ 2.33
PDF-201ENST00000288022 IVNS1ABPQ9Y6Y0 642 aa29.62■■■□□ 2.33
PDF-201ENST00000288022 DOCK3Q8IZD9 2030 aa29.61■■■□□ 2.33
PDF-201ENST00000288022 VWA5AO00534 786 aa29.61■■■□□ 2.33
PDF-201ENST00000288022 NOVP48745 357 aa29.61■■■□□ 2.33
PDF-201ENST00000288022 IKQ13123 557 aaPredicted RBP29.61■■■□□ 2.33
PDF-201ENST00000288022 IQCA1Q86XH1 822 aa29.61■■■□□ 2.33
PDF-201ENST00000288022 PRPF38AQ8NAV1 312 aaKnown RBP29.61■■■□□ 2.33
PDF-201ENST00000288022 TMEM47Q9BQJ4 181 aa29.61■■■□□ 2.33
PDF-201ENST00000288022 ADAMTS5Q9UNA0 930 aa29.61■■■□□ 2.33
PDF-201ENST00000288022 CTDP1Q9Y5B0 961 aaPredicted RBP29.61■■■□□ 2.33
PDF-201ENST00000288022 COL11A1P12107 1806 aaPredicted RBP29.6■■■□□ 2.33
PDF-201ENST00000288022 TMEM232C9JQI7 657 aa29.6■■■□□ 2.33
PDF-201ENST00000288022 CDC45O75419 566 aa29.6■■■□□ 2.33
PDF-201ENST00000288022 CYP2B6P20813 491 aa29.6■■■□□ 2.33
PDF-201ENST00000288022 TMEM132BQ14DG7 1078 aa29.6■■■□□ 2.33
PDF-201ENST00000288022 PXYLP1Q8TE99 480 aa29.6■■■□□ 2.33
PDF-201ENST00000288022 MAP4K1Q92918 833 aa29.6■■■□□ 2.33
PDF-201ENST00000288022 PLXNB2O15031 1838 aa29.59■■■□□ 2.33
PDF-201ENST00000288022 CYP21A2P08686 494 aa29.59■■■□□ 2.33
PDF-201ENST00000288022 ERCC3P19447 782 aa29.59■■■□□ 2.33
PDF-201ENST00000288022 UBXN2AP68543 259 aa29.59■■■□□ 2.33
PDF-201ENST00000288022 TRDNQ13061 729 aa29.59■■■□□ 2.33
PDF-201ENST00000288022 CCDC96Q2M329 555 aa29.59■■■□□ 2.33
PDF-201ENST00000288022 NCAPG2Q86XI2 1143 aa29.59■■■□□ 2.33
PDF-201ENST00000288022 TTC14Q96N46 770 aa29.59■■■□□ 2.33
PDF-201ENST00000288022 TMEM106CQ9BVX2 250 aa29.59■■■□□ 2.33
PDF-201ENST00000288022 RBM8AQ9Y5S9 174 aaKnown RBP29.59■■■□□ 2.33
PDF-201ENST00000288022 STAT2P52630 851 aa29.58■■■□□ 2.33
PDF-201ENST00000288022 CCDC178Q5BJE1 867 aa29.58■■■□□ 2.33
PDF-201ENST00000288022 KCTD1Q719H9 257 aa29.58■■■□□ 2.33
PDF-201ENST00000288022 SHCBP1Q8NEM2 672 aa29.58■■■□□ 2.33
PDF-201ENST00000288022 ANO2Q9NQ90 1003 aa29.58■■■□□ 2.33
PDF-201ENST00000288022 ZSWIM5Q9P217 1185 aa29.58■■■□□ 2.33
PDF-201ENST00000288022 ZBED4O75132 1171 aa29.57■■■□□ 2.32
PDF-201ENST00000288022 PTPREP23469 700 aa29.57■■■□□ 2.32
PDF-201ENST00000288022 RGS2P41220 211 aa29.57■■■□□ 2.32
PDF-201ENST00000288022 MORN1Q5T089 497 aa29.57■■■□□ 2.32
PDF-201ENST00000288022 RCSD1Q6JBY9 416 aa29.57■■■□□ 2.32
PDF-201ENST00000288022 RASGRP2Q7LDG7 609 aa29.57■■■□□ 2.32
PDF-201ENST00000288022 CHURC1Q8WUH1 139 aa29.57■■■□□ 2.32
PDF-201ENST00000288022 DCAF4Q8WV16 495 aa29.57■■■□□ 2.32
PDF-201ENST00000288022 ZSCAN10Q96SZ4 725 aaPredicted RBP29.57■■■□□ 2.32
PDF-201ENST00000288022 LSG1Q9H089 658 aaKnown RBP29.57■■■□□ 2.32
PDF-201ENST00000288022 MROH8Q9H579 483 aa29.57■■■□□ 2.32
PDF-201ENST00000288022 HTTP42858 3142 aa29.57■■■□□ 2.32
PDF-201ENST00000288022 SLC15A5A6NIM6 579 aa29.56■■■□□ 2.32
PDF-201ENST00000288022 STAT3P40763 770 aa29.56■■■□□ 2.32
PDF-201ENST00000288022 FAM160B2Q86V87 743 aa29.56■■■□□ 2.32
PDF-201ENST00000288022 DGKHQ86XP1 1220 aa29.56■■■□□ 2.32
PDF-201ENST00000288022 UBAC1Q9BSL1 405 aa29.56■■■□□ 2.32
PDF-201ENST00000288022 SLC25A27O95847 323 aa29.55■■■□□ 2.32
PDF-201ENST00000288022 INHAP05111 366 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms