RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 ZNF174Q15697 407 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 TMC4Q7Z404 712 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 BLIDQ8IZY5 108 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 PDILTQ8N807 584 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 C4orf32Q8N8J7 132 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 DHX58Q96C10 678 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 DYNLL2Q96FJ2 89 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 GGA1Q9UJY5 639 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 TRPC5Q9UL62 973 aaPredicted RBP8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 NFE2L3Q9Y4A8 694 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 FAM205AQ6ZU69 1335 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 TSPY3P0CV98 308 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 TSPY8P0CW00 308 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 VEGFAP15692 232 aaPredicted RBP8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 BTDP43251 543 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 CUL4BQ13620 913 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 SLC35G1Q2M3R5 365 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 CFAP100Q494V2 611 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 PIK3AP1Q6ZUJ8 805 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 FCHSD1Q86WN1 690 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 STAG2Q8N3U4 1231 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 TBC1D22AQ8WUA7 517 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 TGFBRAP1Q8WUH2 860 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 PPP1R13BQ96KQ4 1090 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 MKNK2Q9HBH9 465 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 PLIN4Q96Q06 1357 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 BAZ2BQ9UIF8 2168 aaKnown RBP8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 USP17L3A6NCW0 530 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 USP17L4A6NCW7 530 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 ADAMTS3O15072 1205 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 LONP1P36776 959 aaKnown RBP8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 RHBDL3P58872 404 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 IL17AQ16552 155 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 PDXDC2PQ6P474 469 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 USP17L1Q7RTZ2 530 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 SLF2Q8IX21 1173 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 CCDC148Q8NFR7 591 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 GPR101Q96P66 508 aaPredicted RBP8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 SPZ1Q9BXG8 430 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 BARHL2Q9NY43 387 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 FLT1P17948 1338 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 VWA3AA6NCI4 1184 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 TMEM232C9JQI7 657 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 CCP110O43303 1012 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 CYTH3O43739 400 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 TOP1P11387 765 aaKnown RBP8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 SMARCA1P28370 1054 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 ZNF827Q17R98 1081 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 TMEM139Q8IV31 216 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 ZNF444Q8N0Y2 327 aaPredicted RBP8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 IQUBQ8NA54 791 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 TBC1D16Q8TBP0 767 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 TMEM47Q9BQJ4 181 aa8.24□□□□□ -1.09
SPARCL1-201ENST00000282470 A0A1B0GTH6 734 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 STXBP3O00186 592 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 POLRMTO00411 1230 aaKnown RBP8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 DDR1Q08345 913 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 MEX3CQ5U5Q3 659 aaKnown RBP8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 CDKAL1Q5VV42 579 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 SPATA1Q5VX52 437 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 WWC2Q6AWC2 1192 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 TYW1BQ6NUM6 668 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 APTXQ7Z2E3 356 aaKnown RBP8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 MAPKAPK5Q8IW41 473 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 NEDD1Q8NHV4 660 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 TSC1Q92574 1164 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 MYH8P13535 1937 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 GREB1LQ9C091 1923 aaPredicted RBP8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 PPP1R3GB7ZBB8 358 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 LAD1O00515 517 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 CDK8P49336 464 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 NR1I3Q14994 352 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 SPECC1LQ69YQ0 1117 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 TEX11Q8IYF3 940 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 SLC44A5Q8NCS7 719 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 GPKOWQ92917 476 aaPredicted RBP eCLIP8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 POLLQ9UGP5 575 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 SUGT1Q9Y2Z0 365 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 SYNRGQ9UMZ2 1314 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 COL11A2P13942 1736 aaPredicted RBP8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 CD44P16070 742 aaKnown RBP8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 HMGB2P26583 209 aaKnown RBP8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 MCM7P33993 719 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 NCBP1Q09161 790 aaKnown RBP8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 SEMA3FQ13275 785 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 SLC4A8Q2Y0W8 1093 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 TRMT44Q8IYL2 757 aaKnown RBP8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 KIF18AQ8NI77 898 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 ZMYND12Q9H0C1 365 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 SAMSN1Q9NSI8 373 aaKnown RBP8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 PCDHA6Q9UN73 950 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 PCDHA8Q9Y5H6 950 aa8.23□□□□□ -1.09
SPARCL1-201ENST00000282470 GTPBP6O43824 516 aaPredicted RBP8.22□□□□□ -1.09
SPARCL1-201ENST00000282470 PRPHP41219 470 aa8.22□□□□□ -1.09
SPARCL1-201ENST00000282470 AFMP43652 599 aa8.22□□□□□ -1.09
SPARCL1-201ENST00000282470 MFSD14BQ5SR56 506 aa8.22□□□□□ -1.09
SPARCL1-201ENST00000282470 SP8Q8IXZ3 490 aa8.22□□□□□ -1.09
SPARCL1-201ENST00000282470 EYA3Q99504 573 aa8.22□□□□□ -1.09
SPARCL1-201ENST00000282470 MTRQ99707 1265 aa8.22□□□□□ -1.09
SPARCL1-201ENST00000282470 L2HGDHQ9H9P8 463 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms