RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 FAM198AQ9UFP1 575 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 BAZ2BQ9UIF8 2168 aaKnown RBP10.97□□□□□ -0.65
TRIM55-201ENST00000276573 C10orf71Q711Q0 1435 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 YDJCA8MPS7 323 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 GOLGA6L19H0YKK7 550 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 PPIP5K2O43314 1243 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 KCNA3P22001 575 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 MDM2Q00987 491 aaPredicted RBP10.97□□□□□ -0.65
TRIM55-201ENST00000276573 ZRSR1Q15695 479 aaKnown RBP10.97□□□□□ -0.65
TRIM55-201ENST00000276573 RASGRP2Q7LDG7 609 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 DHX40Q8IX18 779 aaKnown RBP10.97□□□□□ -0.65
TRIM55-201ENST00000276573 CEP57L1Q8IYX8 460 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 RTKN2Q8IZC4 609 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 DAGLBQ8NCG7 672 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 CNNM3Q8NE01 707 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 FERMT2Q96AC1 680 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 CCDC17Q96LX7 622 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 NAT10Q9H0A0 1025 aaKnown RBP10.97□□□□□ -0.65
TRIM55-201ENST00000276573 CPVLQ9H3G5 476 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 RIOX1Q9H6W3 641 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 CLIP2Q9UDT6 1046 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 ZKSCAN5Q9Y2L8 839 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 ADAMTSL1Q8N6G6 1762 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 SCN9AQ15858 1988 aa10.97□□□□□ -0.65
TRIM55-201ENST00000276573 POLR2DO15514 142 aaKnown RBP10.96□□□□□ -0.65
TRIM55-201ENST00000276573 SNHG28P0DPA3 235 aa10.96□□□□□ -0.65
TRIM55-201ENST00000276573 PDHBP11177 359 aa10.96□□□□□ -0.65
TRIM55-201ENST00000276573 MSNP26038 577 aaKnown RBP10.96□□□□□ -0.65
TRIM55-201ENST00000276573 CACNB3P54284 484 aa10.96□□□□□ -0.65
TRIM55-201ENST00000276573 TCP10Q12799 353 aa10.96□□□□□ -0.65
TRIM55-201ENST00000276573 PTGDRQ13258 359 aa10.96□□□□□ -0.65
TRIM55-201ENST00000276573 CCDC93Q567U6 631 aa10.96□□□□□ -0.65
TRIM55-201ENST00000276573 HEATR3Q7Z4Q2 680 aa10.96□□□□□ -0.65
TRIM55-201ENST00000276573 METTL16Q86W50 562 aaKnown RBP10.96□□□□□ -0.65
TRIM55-201ENST00000276573 CCDC148Q8NFR7 591 aa10.96□□□□□ -0.65
TRIM55-201ENST00000276573 RRP36Q96EU6 259 aaKnown RBP10.96□□□□□ -0.65
TRIM55-201ENST00000276573 BPIFA3Q9BQP9 254 aa10.96□□□□□ -0.65
TRIM55-201ENST00000276573 DDTLA6NHG4 134 aaPredicted RBP10.96□□□□□ -0.66
TRIM55-201ENST00000276573 BECN2A8MW95 431 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 BIN1O00499 593 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 TTLL1O95922 423 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 DPEP1P16444 411 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 ZNF75DP51815 510 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 ATP2C1P98194 919 aaPredicted RBP10.96□□□□□ -0.66
TRIM55-201ENST00000276573 PNOCQ13519 176 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 ASPRV1Q53RT3 343 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 USP49Q70CQ1 688 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 PLA2G4DQ86XP0 818 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 FOXP4Q8IVH2 680 aaPredicted RBP10.96□□□□□ -0.66
TRIM55-201ENST00000276573 PSMD1Q99460 953 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 UBA5Q9GZZ9 404 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 VAT1LQ9HCJ6 419 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 PI4KBQ9UBF8 816 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 SERTAD1Q9UHV2 236 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 PCDHA6Q9UN73 950 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 PCDHA8Q9Y5H6 950 aa10.96□□□□□ -0.66
TRIM55-201ENST00000276573 ZNF646O15015 1829 aaPredicted RBP10.95□□□□□ -0.66
TRIM55-201ENST00000276573 SLURP2P0DP57 97 aa10.95□□□□□ -0.66
TRIM55-201ENST00000276573 EIF6P56537 245 aaKnown RBP10.95□□□□□ -0.66
TRIM55-201ENST00000276573 DPCR1Q3MIW9 517 aa10.95□□□□□ -0.66
TRIM55-201ENST00000276573 CFAP100Q494V2 611 aa10.95□□□□□ -0.66
TRIM55-201ENST00000276573 SH3BP5LQ7L8J4 393 aa10.95□□□□□ -0.66
TRIM55-201ENST00000276573 PIGSQ96S52 555 aa10.95□□□□□ -0.66
TRIM55-201ENST00000276573 TRIM5Q9C035 493 aa10.95□□□□□ -0.66
TRIM55-201ENST00000276573 ZMYND12Q9H0C1 365 aa10.95□□□□□ -0.66
TRIM55-201ENST00000276573 HOOK1Q9UJC3 728 aaKnown RBP10.95□□□□□ -0.66
TRIM55-201ENST00000276573 MPHOSPH10O00566 681 aaKnown RBP10.94□□□□□ -0.66
TRIM55-201ENST00000276573 FOXN1O15353 648 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 PPP4R3BQ5MIZ7 849 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 KANK3Q6NY19 840 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 SARM1Q6SZW1 724 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 CLEC10AQ8IUN9 316 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 LRRC47Q8N1G4 583 aaKnown RBP10.94□□□□□ -0.66
TRIM55-201ENST00000276573 AOPEPQ8N6M6 819 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 C4orf32Q8N8J7 132 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 CCDC12Q8WUD4 166 aaPredicted RBP10.94□□□□□ -0.66
TRIM55-201ENST00000276573 EPSTI1Q96J88 318 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 PRMT6Q96LA8 375 aaPredicted RBP10.94□□□□□ -0.66
TRIM55-201ENST00000276573 TDRD3Q9H7E2 651 aaKnown RBP10.94□□□□□ -0.66
TRIM55-201ENST00000276573 DNAJC18Q9H819 358 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 SEC63Q9UGP8 760 aaKnown RBP10.94□□□□□ -0.66
TRIM55-201ENST00000276573 PCDHA5Q9Y5H7 936 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.94□□□□□ -0.66
TRIM55-201ENST00000276573 FRMPD2Q68DX3 1309 aaPredicted RBP10.94□□□□□ -0.66
TRIM55-201ENST00000276573 CCDC194A0A1B0GVG4 234 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 SMCO2A6NFE2 343 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 ACTN4O43707 911 aaKnown RBP10.94□□□□□ -0.66
TRIM55-201ENST00000276573 ZNF500O60304 480 aaPredicted RBP10.94□□□□□ -0.66
TRIM55-201ENST00000276573 ENTPD3O75355 529 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 VIL1P09327 827 aaKnown RBP10.94□□□□□ -0.66
TRIM55-201ENST00000276573 MCM7P33993 719 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 NAPAP54920 295 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 ZNF543Q08ER8 600 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 CERKLQ49MI3 558 aaPredicted RBP10.94□□□□□ -0.66
TRIM55-201ENST00000276573 ISM2Q6H9L7 571 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 TATDN1Q6P1N9 297 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.94□□□□□ -0.66
TRIM55-201ENST00000276573 HOMER1Q86YM7 354 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 RASGRP4Q8TDF6 673 aa10.94□□□□□ -0.66
TRIM55-201ENST00000276573 VPS33BQ9H267 617 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms