RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 PYGLP06737 847 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 FDPSP14324 419 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 PECAM1P16284 738 aaPredicted RBP17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 SYKP43405 635 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 EZH2Q15910 746 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 OLFM4Q6UX06 510 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 KIF6Q6ZMV9 814 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 STOX1Q6ZVD7 989 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 ZBTB1Q9Y2K1 713 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 PCDHA5Q9Y5H7 936 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 SALL1Q9NSC2 1324 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 BCL9O00512 1426 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 RBBP5Q15291 538 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 TRAPPC11Q7Z392 1133 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 RASSF8Q8NHQ8 419 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 AENQ8WTP8 325 aaKnown RBP17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 HDAC7Q8WUI4 952 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 SAAL1Q96ER3 474 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 STAMBPL1Q96FJ0 436 aa17.62■□□□□ 0.41
CTDSP1-201ENST00000273062 UPP2O95045 317 aa17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 ATP1A1P05023 1023 aaKnown RBP17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 ARID4AP29374 1257 aaPredicted RBP17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 SLC8A3P57103 927 aa17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 NR1I3Q14994 352 aa17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 PLCB4Q15147 1175 aa17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 OR8K1Q8NGG5 319 aa17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 CARMIL3Q8ND23 1372 aa17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 KIF28PB7ZC32 967 aa17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 STARD3NLO95772 234 aa17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 KRT14P02533 472 aa17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 IL15P40933 162 aaPredicted RBP17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 ERVK-24P63145 666 aa17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 NSMCE1Q8WV22 266 aa17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 LLPHQ9BRT6 129 aaKnown RBP17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 OSBPL7Q9BZF2 842 aa17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 EPN3Q9H201 632 aa17.61■□□□□ 0.41
CTDSP1-201ENST00000273062 PDE2AO00408 941 aaPredicted RBP17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 ZNF185O15231 689 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 CYP21A2P08686 494 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 CYP19A1P11511 503 aaPredicted RBP17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 CMA1P23946 247 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 ADORA1P30542 326 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 CASP14P31944 242 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 MYO1EQ12965 1108 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 BZW1Q7L1Q6 419 aaKnown RBP17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 HOMEZQ8IX15 550 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 CCT8L2Q96SF2 557 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 COL14A1Q05707 1796 aaKnown RBP17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 GOLGA8KD6RF30 607 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 ATP2C2O75185 946 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 FXR1P51114 621 aaKnown RBP eCLIP17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 TRAF1Q13077 416 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 MYCBPAPQ8TBZ2 947 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 PAGR1Q9BTK6 254 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 YIPF3Q9GZM5 350 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 POLR3EQ9NVU0 708 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 HMG20BQ9P0W2 317 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 GUCA1BQ9UMX6 200 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 JCADQ9P266 1359 aa17.6■□□□□ 0.41
CTDSP1-201ENST00000273062 A0A0G2JLW4 131 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 MYBL1P10243 752 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 SHC4Q6S5L8 630 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 C6orf89Q6UWU4 347 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 MICALCLQ6ZW33 695 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 CHST3Q7LGC8 479 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 SPATS2Q86XZ4 545 aaKnown RBP17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 SLF1Q9BQI6 1058 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 PAG1Q9NWQ8 432 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 TBC1D2BQ9UPU7 963 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 RIPOR2Q9Y4F9 1068 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 MAP3K15Q6ZN16 1313 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 C2orf54Q08AI8 447 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 CCDC57Q2TAC2 916 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 ACSBG1Q96GR2 724 aa17.59■□□□□ 0.41
CTDSP1-201ENST00000273062 RNF225M0QZC1 329 aaPredicted RBP17.58■□□□□ 0.41
CTDSP1-201ENST00000273062 YEATS4O95619 227 aa17.58■□□□□ 0.41
CTDSP1-201ENST00000273062 SLC5A9Q2M3M2 681 aa17.58■□□□□ 0.41
CTDSP1-201ENST00000273062 NLRP14Q86W24 1093 aa17.58■□□□□ 0.41
CTDSP1-201ENST00000273062 KBTBD3Q8NAB2 608 aa17.58■□□□□ 0.41
CTDSP1-201ENST00000273062 MAGEC3Q8TD91 643 aa17.58■□□□□ 0.41
CTDSP1-201ENST00000273062 FAM210AQ96ND0 272 aa17.58■□□□□ 0.41
CTDSP1-201ENST00000273062 NUP58Q9BVL2 599 aa17.58■□□□□ 0.41
CTDSP1-201ENST00000273062 FAM184BQ9ULE4 1060 aa17.58■□□□□ 0.41
CTDSP1-201ENST00000273062 TARSL2A2RTX5 802 aaKnown RBP17.58■□□□□ 0.4
CTDSP1-201ENST00000273062 MFAP3LO75121 409 aa17.58■□□□□ 0.4
CTDSP1-201ENST00000273062 CDC25AP30304 524 aa17.58■□□□□ 0.4
CTDSP1-201ENST00000273062 PTGISQ16647 500 aa17.58■□□□□ 0.4
CTDSP1-201ENST00000273062 CCDC181Q5TID7 509 aa17.58■□□□□ 0.4
CTDSP1-201ENST00000273062 CAPRIN2Q6IMN6 1127 aaKnown RBP17.58■□□□□ 0.4
CTDSP1-201ENST00000273062 RSRC1Q96IZ7 334 aaKnown RBP17.58■□□□□ 0.4
CTDSP1-201ENST00000273062 G3BP2Q9UN86 482 aaKnown RBP17.58■□□□□ 0.4
CTDSP1-201ENST00000273062 TTF2Q9UNY4 1162 aaKnown RBP17.58■□□□□ 0.4
CTDSP1-201ENST00000273062 PCCAP05165 728 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-201ENST00000273062 GIGYF2Q6Y7W6 1299 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-201ENST00000273062 ZBTB38Q8NAP3 1195 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-201ENST00000273062 HOOK1Q9UJC3 728 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-201ENST00000273062 NUTM2BA6NNL0 878 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-201ENST00000273062 NUTM2EB1AL46 878 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-201ENST00000273062 MCM3P25205 808 aa17.57■□□□□ 0.4
CTDSP1-201ENST00000273062 NNTQ13423 1086 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 224.3 ms