RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 U3KPZ7 1027 aaPredicted RBP9.95□□□□□ -0.82
ERCC8-201ENST00000265038 MYPNQ86TC9 1320 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 B4E1Z4 1266 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 KDM4AO75164 1064 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 FLT3LGP49771 235 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 RCSD1Q6JBY9 416 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 SAMD1Q6SPF0 538 aaPredicted RBP9.95□□□□□ -0.82
ERCC8-201ENST00000265038 COA7Q96BR5 231 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 TMEM47Q9BQJ4 181 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 PPP1R9AQ9ULJ8 1098 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 GREB1LQ9C091 1923 aaPredicted RBP9.94□□□□□ -0.82
ERCC8-201ENST00000265038 MCCP23508 829 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 MAPK4P31152 587 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 HOXD11P31277 338 aaPredicted RBP9.94□□□□□ -0.82
ERCC8-201ENST00000265038 RASGRP2Q7LDG7 609 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 GPR142Q7Z601 462 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 ARMC5Q96C12 935 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 GMCL1Q96IK5 515 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 TTC14Q96N46 770 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 ZKSCAN3Q9BRR0 538 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 ZSWIM5Q9P217 1185 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 RBM8AQ9Y5S9 174 aaKnown RBP9.94□□□□□ -0.82
ERCC8-201ENST00000265038 VWA5AO00534 786 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 CDC45O75419 566 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 BMP3P12645 472 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 NT5C2P49902 561 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 IRF5Q13568 498 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 TMEM132BQ14DG7 1078 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 KIAA1211Q6ZU35 1233 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 MB21D1Q8N884 522 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 REPS2Q8NFH8 660 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 RAET1EQ8TD07 263 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 SH3TC2Q8TF17 1288 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 CHMP4CQ96CF2 233 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 SLF1Q9BQI6 1058 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 MOV10L1Q9BXT6 1211 aaKnown RBP9.94□□□□□ -0.82
ERCC8-201ENST00000265038 KRT23Q9C075 422 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 SPATC1LQ9H0A9 340 aa9.94□□□□□ -0.82
ERCC8-201ENST00000265038 TOP1P11387 765 aaKnown RBP9.93□□□□□ -0.82
ERCC8-201ENST00000265038 SLC1A4P43007 532 aa9.93□□□□□ -0.82
ERCC8-201ENST00000265038 CCNA1P78396 465 aa9.93□□□□□ -0.82
ERCC8-201ENST00000265038 SLC9C1Q4G0N8 1177 aa9.93□□□□□ -0.82
ERCC8-201ENST00000265038 MORN1Q5T089 497 aa9.93□□□□□ -0.82
ERCC8-201ENST00000265038 STOX1Q6ZVD7 989 aa9.93□□□□□ -0.82
ERCC8-201ENST00000265038 CYB5R4Q7L1T6 521 aa9.93□□□□□ -0.82
ERCC8-201ENST00000265038 PLEKHH3Q7Z736 793 aa9.93□□□□□ -0.82
ERCC8-201ENST00000265038 DGKHQ86XP1 1220 aa9.93□□□□□ -0.82
ERCC8-201ENST00000265038 ANKS1AQ92625 1134 aa9.93□□□□□ -0.82
ERCC8-201ENST00000265038 ZNF333Q96JL9 665 aa9.93□□□□□ -0.82
ERCC8-201ENST00000265038 CNNM2Q9H8M5 875 aa9.93□□□□□ -0.82
ERCC8-201ENST00000265038 FEM1BQ9UK73 627 aa9.93□□□□□ -0.82
ERCC8-201ENST00000265038 TMEM232C9JQI7 657 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 E7EWF7 191 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 GRK4P32298 578 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 NECTIN1Q15223 517 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 KCTD1Q719H9 257 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 PRPF38AQ8NAV1 312 aaKnown RBP9.92□□□□□ -0.82
ERCC8-201ENST00000265038 USP6NLQ92738 828 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 KIFC2Q96AC6 838 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 ZSCAN10Q96SZ4 725 aaPredicted RBP9.92□□□□□ -0.82
ERCC8-201ENST00000265038 ANO2Q9NQ90 1003 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 MTMR7Q9Y216 660 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 ZSWIM8A7E2V4 1837 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 ADCY3O60266 1144 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 ELNP15502 786 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 ERCC3P19447 782 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 PTPREP23469 700 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 PLS1Q14651 629 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 CCDC178Q5BJE1 867 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 NBPF11Q86T75 865 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 IQCA1Q86XH1 822 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 CCAR1Q8IX12 1150 aaKnown RBP9.92□□□□□ -0.82
ERCC8-201ENST00000265038 SHCBP1Q8NEM2 672 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 PXYLP1Q8TE99 480 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 NUDT12Q9BQG2 462 aa9.92□□□□□ -0.82
ERCC8-201ENST00000265038 ZNF214Q9UL59 606 aaPredicted RBP9.92□□□□□ -0.82
ERCC8-201ENST00000265038 SLC27A2O14975 620 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 PLA2G6O60733 806 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 PDHBP11177 359 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 CYP2B6P20813 491 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 STAT3P40763 770 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 SOX10P56693 466 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 SEC23AQ15436 765 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 WDR78Q5VTH9 848 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 TTBK2Q6IQ55 1244 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 CASC1Q6TDU7 716 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 RIOX2Q8IUF8 465 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 ENAHQ8N8S7 591 aaPredicted RBP9.91□□□□□ -0.82
ERCC8-201ENST00000265038 SLAIN1Q8ND83 568 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 DCAF4Q8WV16 495 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 TNKSO95271 1327 aa9.91□□□□□ -0.82
ERCC8-201ENST00000265038 SLC15A5A6NIM6 579 aa9.9□□□□□ -0.82
ERCC8-201ENST00000265038 SNHG28P0DPA3 235 aa9.9□□□□□ -0.82
ERCC8-201ENST00000265038 STAT2P52630 851 aa9.9□□□□□ -0.82
ERCC8-201ENST00000265038 TRDNQ13061 729 aa9.9□□□□□ -0.82
ERCC8-201ENST00000265038 COL9A3Q14050 684 aaPredicted RBP9.9□□□□□ -0.82
ERCC8-201ENST00000265038 MTFR1Q15390 333 aa9.9□□□□□ -0.82
ERCC8-201ENST00000265038 CREB3L3Q68CJ9 461 aa9.9□□□□□ -0.82
ERCC8-201ENST00000265038 FAM160B2Q86V87 743 aa9.9□□□□□ -0.82
ERCC8-201ENST00000265038 NCAPG2Q86XI2 1143 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms