RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 TPH2Q8IWU9 490 aa19.85■□□□□ 0.77
COL5A3-201ENST00000264828 CFBP00751 764 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 SLC1A4P43007 532 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 SESN3P58005 492 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 KBTBD3Q8NAB2 608 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 LGR6Q9HBX8 967 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 VPS41P49754 854 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 LRRC43Q8N309 656 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 CCDC24Q8N4L8 307 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 RSAD2Q8WXG1 361 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 KRIT1O00522 736 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 PRPF6O94906 941 aaKnown RBP19.84■□□□□ 0.77
COL5A3-201ENST00000264828 BAG2O95816 211 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 CUL4BQ13620 913 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 SPATA5Q8NB90 893 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 GBP5Q96PP8 586 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 NXNQ6DKJ4 435 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 ARHGEF10O15013 1369 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 PDE8AO60658 829 aa19.84■□□□□ 0.77
COL5A3-201ENST00000264828 TROVE2P10155 538 aaKnown RBP eCLIP19.83■□□□□ 0.77
COL5A3-201ENST00000264828 SRGAP1Q7Z6B7 1085 aa19.83■□□□□ 0.77
COL5A3-201ENST00000264828 PARP2Q9UGN5 583 aa19.83■□□□□ 0.77
COL5A3-201ENST00000264828 TNNI1P19237 187 aa19.83■□□□□ 0.77
COL5A3-201ENST00000264828 WHAMMP3Q1A5X7 153 aa19.83■□□□□ 0.77
COL5A3-201ENST00000264828 CDAN1Q8IWY9 1227 aa19.83■□□□□ 0.77
COL5A3-201ENST00000264828 TAB3Q8N5C8 712 aaPredicted RBP19.83■□□□□ 0.77
COL5A3-201ENST00000264828 GABPB2Q8TAK5 448 aaPredicted RBP19.83■□□□□ 0.77
COL5A3-201ENST00000264828 TGFBRAP1Q8WUH2 860 aa19.83■□□□□ 0.77
COL5A3-201ENST00000264828 RABGAP1Q9Y3P9 1069 aa19.83■□□□□ 0.77
COL5A3-201ENST00000264828 MAP2K2P36507 400 aa19.83■□□□□ 0.76
COL5A3-201ENST00000264828 CCDC125Q86Z20 511 aa19.83■□□□□ 0.76
COL5A3-201ENST00000264828 MICAL1Q8TDZ2 1067 aa19.83■□□□□ 0.76
COL5A3-201ENST00000264828 NACA2Q9H009 215 aa19.83■□□□□ 0.76
COL5A3-201ENST00000264828 NOD1Q9Y239 953 aa19.83■□□□□ 0.76
COL5A3-201ENST00000264828 PPP2R2CQ9Y2T4 447 aa19.83■□□□□ 0.76
COL5A3-201ENST00000264828 SORBS3O60504 671 aa19.83■□□□□ 0.76
COL5A3-201ENST00000264828 RAB3IPQ96QF0 476 aaPredicted RBP19.83■□□□□ 0.76
COL5A3-201ENST00000264828 GOLGA8KD6RF30 607 aa19.82■□□□□ 0.76
COL5A3-201ENST00000264828 IFNB1P01574 187 aa19.82■□□□□ 0.76
COL5A3-201ENST00000264828 SLC12A2P55011 1212 aa19.82■□□□□ 0.76
COL5A3-201ENST00000264828 BRD3Q15059 726 aa19.82■□□□□ 0.76
COL5A3-201ENST00000264828 DIXDC1Q155Q3 683 aa19.82■□□□□ 0.76
COL5A3-201ENST00000264828 EDC3Q96F86 508 aaKnown RBP19.82■□□□□ 0.76
COL5A3-201ENST00000264828 ZNF827Q17R98 1081 aa19.82■□□□□ 0.76
COL5A3-201ENST00000264828 FAM98CQ17RN3 349 aaKnown RBP19.82■□□□□ 0.76
COL5A3-201ENST00000264828 GGA1Q9UJY5 639 aa19.82■□□□□ 0.76
COL5A3-201ENST00000264828 STK24Q9Y6E0 443 aa19.82■□□□□ 0.76
COL5A3-201ENST00000264828 OPHN1O60890 802 aa19.82■□□□□ 0.76
COL5A3-201ENST00000264828 ADCY8P40145 1251 aa19.82■□□□□ 0.76
COL5A3-201ENST00000264828 PARP10Q53GL7 1025 aa19.82■□□□□ 0.76
COL5A3-201ENST00000264828 LIG3P49916 1009 aa19.81■□□□□ 0.76
COL5A3-201ENST00000264828 CCDC84Q86UT8 332 aaPredicted RBP19.81■□□□□ 0.76
COL5A3-201ENST00000264828 PRKG1Q13976 671 aa19.81■□□□□ 0.76
COL5A3-201ENST00000264828 CAPS2Q9BXY5 557 aa19.81■□□□□ 0.76
COL5A3-201ENST00000264828 FRMD3A2A2Y4 597 aa19.81■□□□□ 0.76
COL5A3-201ENST00000264828 GPBP1Q86WP2 473 aa19.81■□□□□ 0.76
COL5A3-201ENST00000264828 BABAM1Q9NWV8 329 aa19.81■□□□□ 0.76
COL5A3-201ENST00000264828 COBLO75128 1261 aa19.81■□□□□ 0.76
COL5A3-201ENST00000264828 TECP42680 631 aa19.81■□□□□ 0.76
COL5A3-201ENST00000264828 TRIM58Q8NG06 486 aa19.81■□□□□ 0.76
COL5A3-201ENST00000264828 NSMCE1Q8WV22 266 aa19.81■□□□□ 0.76
COL5A3-201ENST00000264828 ST7Q9NRC1 585 aa19.81■□□□□ 0.76
COL5A3-201ENST00000264828 KLHL14Q9P2G3 628 aa19.81■□□□□ 0.76
COL5A3-201ENST00000264828 HYOU1Q9Y4L1 999 aa19.81■□□□□ 0.76
COL5A3-201ENST00000264828 MAIP1Q8WWC4 291 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 EFCC1Q9HA90 598 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 STK32BQ9NY57 414 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 KIAA1468Q9P260 1216 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.8■□□□□ 0.76
COL5A3-201ENST00000264828 TFAP4Q01664 338 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 KRT81Q14533 505 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 NSMFQ6X4W1 530 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 RASSF2P50749 326 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 P3H4Q92791 437 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 ATP2A3Q93084 1043 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 FAM102BQ5T8I3 360 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 GLT8D2Q9H1C3 349 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 AZI2Q9H6S1 392 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 RAB20Q9NX57 234 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 SMCO2A6NFE2 343 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 SCYL2Q6P3W7 929 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 PPP4R1Q8TF05 950 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 CCDC87Q9NVE4 849 aa19.8■□□□□ 0.76
COL5A3-201ENST00000264828 SH3TC1Q8TE82 1336 aa19.79■□□□□ 0.76
COL5A3-201ENST00000264828 BRD1O95696 1058 aa19.79■□□□□ 0.76
COL5A3-201ENST00000264828 A1BGP04217 495 aa19.79■□□□□ 0.76
COL5A3-201ENST00000264828 NUCKS1Q9H1E3 243 aaKnown RBP19.79■□□□□ 0.76
COL5A3-201ENST00000264828 FRMPD2Q68DX3 1309 aaPredicted RBP19.79■□□□□ 0.76
COL5A3-201ENST00000264828 DKC1O60832 514 aaKnown RBP eCLIP19.79■□□□□ 0.76
COL5A3-201ENST00000264828 GCKP35557 465 aa19.79■□□□□ 0.76
COL5A3-201ENST00000264828 LPIN2Q92539 896 aa19.79■□□□□ 0.76
COL5A3-201ENST00000264828 SEPT10Q9P0V9 454 aa19.79■□□□□ 0.76
COL5A3-201ENST00000264828 ZNF215Q9UL58 517 aaPredicted RBP19.79■□□□□ 0.76
COL5A3-201ENST00000264828 ADALQ6DHV7 355 aa19.79■□□□□ 0.76
COL5A3-201ENST00000264828 REXO1Q8N1G1 1221 aaKnown RBP19.79■□□□□ 0.76
COL5A3-201ENST00000264828 IBTKQ9P2D0 1353 aaPredicted RBP19.79■□□□□ 0.76
COL5A3-201ENST00000264828 MYSM1Q5VVJ2 828 aa19.78■□□□□ 0.76
COL5A3-201ENST00000264828 OR8K1Q8NGG5 319 aa19.78■□□□□ 0.76
COL5A3-201ENST00000264828 CCDC51Q96ER9 411 aa19.78■□□□□ 0.76
COL5A3-201ENST00000264828 CARD10Q9BWT7 1032 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms