RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 PDCD2Q16342 344 aaPredicted RBP12.92□□□□□ -0.34
DNMT3A-201ENST00000264709 CNPY4Q8N129 248 aa12.92□□□□□ -0.34
DNMT3A-201ENST00000264709 ARHGEF40Q8TER5 1519 aa12.92□□□□□ -0.34
DNMT3A-201ENST00000264709 PTH1RQ03431 593 aa12.92□□□□□ -0.34
DNMT3A-201ENST00000264709 CCDC82Q8N4S0 544 aa12.92□□□□□ -0.34
DNMT3A-201ENST00000264709 PHF8Q9UPP1 1060 aa12.92□□□□□ -0.34
DNMT3A-201ENST00000264709 PCDHA5Q9Y5H7 936 aa12.92□□□□□ -0.34
DNMT3A-201ENST00000264709 ARHGEF28Q8N1W1 1705 aaKnown RBP12.92□□□□□ -0.34
DNMT3A-201ENST00000264709 ATP6V0A2Q9Y487 856 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 ATP10DQ9P241 1426 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 LMBR1LQ6UX01 489 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 CCDC63Q8NA47 563 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 PPP1R14CQ8TAE6 165 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 G2E3Q7L622 706 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 SEC31AO94979 1220 aaKnown RBP12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 ANKRD12Q6UB98 2062 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 MUM1Q2TAK8 710 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 CCDC144CPQ8IYA2 1237 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 Q9H521 79 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 MAP3K15Q6ZN16 1313 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 CASP14P31944 242 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 SPZ1Q9BXG8 430 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 GPAA1O43292 621 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 PDIA3P30101 505 aaKnown RBP12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 ZBED6P86452 979 aa12.91□□□□□ -0.34
DNMT3A-201ENST00000264709 MYH7P12883 1935 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 STAG1Q8WVM7 1258 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 PDE6CP51160 858 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 C2CD5Q86YS7 1000 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 SAAL1Q96ER3 474 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 VPS16Q9H269 839 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 SKIP12755 728 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 LONP1P36776 959 aaKnown RBP12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 GCKRQ14397 625 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 CCDC65Q8IXS2 484 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 MLH3Q9UHC1 1453 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 TNRQ92752 1358 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 NDUFA10O95299 355 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 DZIP1Q86YF9 867 aaKnown RBP12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 ZNF444Q8N0Y2 327 aaPredicted RBP12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 SLC35F6Q8N357 371 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 ABCB6Q9NP58 842 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 TYW1Q9NV66 732 aaKnown RBP12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 PLCG2P16885 1265 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 USP5P45974 858 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 HOMER2Q9NSB8 354 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 DEPDC5O75140 1603 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 ADCK5Q3MIX3 580 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 TTLL7Q6ZT98 887 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 CUL5Q93034 780 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 SHPRHQ149N8 1683 aa12.9□□□□□ -0.34
DNMT3A-201ENST00000264709 BEND3Q5T5X7 828 aa12.9□□□□□ -0.35
DNMT3A-201ENST00000264709 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.9□□□□□ -0.35
DNMT3A-201ENST00000264709 LMNAP02545 664 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 ZNF76P36508 570 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 FAM69CQ0P6D2 419 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 AK8Q96MA6 479 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 RESP18Q5W5W9 173 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 HAUS3Q68CZ6 603 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 COPS6Q7L5N1 327 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 PI4K2BQ8TCG2 481 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 DCAF5Q96JK2 942 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 TUBB6Q9BUF5 446 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 CDC42BPGQ6DT37 1551 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 MXRA7P84157 204 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 CCZ1BP86790 482 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 CCZ1P86791 482 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 PPP2R5AQ15172 486 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 CCDC188H7C350 402 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 DNAJC8O75937 253 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 PPANQ9NQ55 473 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 TMOD2Q9NZR1 351 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 KAT6AQ92794 2004 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 ABCC3O15438 1527 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 COPB1P53618 953 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 EYA1Q99502 592 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 NT5C3AQ9H0P0 336 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 STK36Q9NRP7 1315 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 DHX40Q8IX18 779 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 ARMC2Q8NEN0 867 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 DDX23Q9BUQ8 820 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 RNF26Q9BY78 433 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 NOL3O60936 208 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 BBOF1Q8ND07 529 aa12.89□□□□□ -0.35
DNMT3A-201ENST00000264709 GRID2IPA4D2P6 1211 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 PGRMC1O00264 195 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 PLBD2Q8NHP8 589 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 CLTAP09496 248 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 LIFRP42702 1097 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 FMR1NBQ8N0W7 255 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 NRXN1Q9ULB1 1477 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 HSPD1P10809 573 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 ZBTB17Q13105 803 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 NR1H3Q13133 447 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 PPP1R21Q6ZMI0 780 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 KRT25Q7Z3Z0 450 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 TMOD3Q9NYL9 352 aa12.88□□□□□ -0.35
DNMT3A-201ENST00000264709 INO80Q9ULG1 1556 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms