RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 FMNL1O95466 1100 aaPredicted RBP15.55■□□□□ 0.08
CDH3-201ENST00000264012 KLHL30Q0D2K2 578 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 HLFQ16534 295 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 FBXO11Q86XK2 927 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 STMN4Q9H169 189 aaPredicted RBP15.55■□□□□ 0.08
CDH3-201ENST00000264012 INCENPQ9NQS7 918 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 PALLDQ8WX93 1383 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 MADDQ8WXG6 1647 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 CCDC25Q86WR0 208 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 SYMPKQ92797 1274 aaKnown RBP15.55■□□□□ 0.08
CDH3-201ENST00000264012 PIH1D3Q9NQM4 214 aaKnown RBP15.55■□□□□ 0.08
CDH3-201ENST00000264012 BCS1LQ9Y276 419 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 GTPBP6O43824 516 aaPredicted RBP15.54■□□□□ 0.08
CDH3-201ENST00000264012 LARGE1O95461 756 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 SRP68Q9UHB9 627 aaKnown RBP15.54■□□□□ 0.08
CDH3-201ENST00000264012 COMMD10Q9Y6G5 202 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 ADGRB3O60242 1522 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 TLDC2A0PJX2 215 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 KCNJ18B7U540 433 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 KCNJ12Q14500 433 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 CFAP58Q5T655 872 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 TMC4Q7Z404 712 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 APBB1IPQ7Z5R6 666 aaPredicted RBP15.54■□□□□ 0.08
CDH3-201ENST00000264012 MYOCDQ8IZQ8 938 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 TSNARE1Q96NA8 513 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 PAIP2Q9BPZ3 127 aaKnown RBP15.54■□□□□ 0.08
CDH3-201ENST00000264012 AZI2Q9H6S1 392 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 POLR3EQ9NVU0 708 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 FANCLQ9NW38 375 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 MORC3Q14149 939 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 HDXQ7Z353 690 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 NLRX1Q86UT6 975 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 CCDC26Q8TAB7 109 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 CCDC17Q96LX7 622 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 NAP1L3Q99457 506 aaPredicted RBP15.54■□□□□ 0.08
CDH3-201ENST00000264012 NLRC4Q9NPP4 1024 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 VPS18Q9P253 973 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 THRAP3Q9Y2W1 955 aaKnown RBP15.54■□□□□ 0.08
CDH3-201ENST00000264012 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.54■□□□□ 0.08
CDH3-201ENST00000264012 CAPN2P17655 700 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 RNASE9P60153 205 aaKnown RBP15.54■□□□□ 0.08
CDH3-201ENST00000264012 PCDHA1Q9Y5I3 950 aa15.54■□□□□ 0.08
CDH3-201ENST00000264012 SH2B2O14492 632 aaPredicted RBP15.53■□□□□ 0.08
CDH3-201ENST00000264012 LONP1P36776 959 aaKnown RBP15.53■□□□□ 0.08
CDH3-201ENST00000264012 TRPC3Q13507 836 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 RRAGAQ7L523 313 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 GINS2Q9Y248 185 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 PCDHA5Q9Y5H7 936 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 ALAS1P13196 640 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 C8orf74Q6P047 294 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 MIER3Q7Z3K6 550 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.53■□□□□ 0.08
CDH3-201ENST00000264012 MRPL11Q9Y3B7 192 aaKnown RBP15.53■□□□□ 0.08
CDH3-201ENST00000264012 PCDHB13Q9Y5F0 798 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 TMEM232C9JQI7 657 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 IRX3P78415 501 aaPredicted RBP15.53■□□□□ 0.08
CDH3-201ENST00000264012 KIF23Q02241 960 aaPredicted RBP15.53■□□□□ 0.08
CDH3-201ENST00000264012 ABCB5Q2M3G0 1257 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 UTP14CQ5TAP6 766 aaKnown RBP15.53■□□□□ 0.08
CDH3-201ENST00000264012 SFMBT2Q5VUG0 894 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 CCDC51Q96ER9 411 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 CCDC114Q96M63 670 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 ZSWIM5Q9P217 1185 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 DDX25Q9UHL0 483 aaKnown RBP15.53■□□□□ 0.08
CDH3-201ENST00000264012 SMIM23A6NLE4 172 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 FLOT1O75955 427 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 POLR2MP0CAP2 368 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 U2AF2P26368 475 aaKnown RBP eCLIP15.53■□□□□ 0.08
CDH3-201ENST00000264012 ZNF354CQ86Y25 554 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 MRFAP1L1Q96HT8 127 aa15.53■□□□□ 0.08
CDH3-201ENST00000264012 ZNF500O60304 480 aaPredicted RBP15.52■□□□□ 0.08
CDH3-201ENST00000264012 PPP6R2O75170 966 aa15.52■□□□□ 0.08
CDH3-201ENST00000264012 KIF4AO95239 1232 aa15.52■□□□□ 0.08
CDH3-201ENST00000264012 OR8K1Q8NGG5 319 aa15.52■□□□□ 0.08
CDH3-201ENST00000264012 ATP2C2O75185 946 aa15.52■□□□□ 0.08
CDH3-201ENST00000264012 GNA14O95837 355 aa15.52■□□□□ 0.08
CDH3-201ENST00000264012 IFNAR1P17181 557 aa15.52■□□□□ 0.08
CDH3-201ENST00000264012 TRAPPC10P48553 1259 aa15.52■□□□□ 0.08
CDH3-201ENST00000264012 DNAJC21Q5F1R6 531 aaKnown RBP15.52■□□□□ 0.08
CDH3-201ENST00000264012 CLEC4GQ6UXB4 293 aa15.52■□□□□ 0.08
CDH3-201ENST00000264012 SLFN12Q8IYM2 578 aa15.52■□□□□ 0.08
CDH3-201ENST00000264012 ARFGAP2Q8N6H7 521 aa15.52■□□□□ 0.08
CDH3-201ENST00000264012 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.52■□□□□ 0.08
CDH3-201ENST00000264012 ZFP91Q96JP5 570 aaPredicted RBP15.52■□□□□ 0.08
CDH3-201ENST00000264012 CSRNP2Q9H175 543 aa15.52■□□□□ 0.08
CDH3-201ENST00000264012 NUCKS1Q9H1E3 243 aaKnown RBP15.52■□□□□ 0.08
CDH3-201ENST00000264012 RSPH14Q9UHP6 348 aa15.52■□□□□ 0.08
CDH3-201ENST00000264012 MCAMP43121 646 aa15.52■□□□□ 0.07
CDH3-201ENST00000264012 GPATCH4Q5T3I0 446 aaKnown RBP15.52■□□□□ 0.07
CDH3-201ENST00000264012 TYW1BQ6NUM6 668 aa15.52■□□□□ 0.07
CDH3-201ENST00000264012 IQCDQ96DY2 449 aa15.52■□□□□ 0.07
CDH3-201ENST00000264012 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.52■□□□□ 0.07
CDH3-201ENST00000264012 NSRP1Q9H0G5 558 aaKnown RBP15.52■□□□□ 0.07
CDH3-201ENST00000264012 USP31Q70CQ4 1352 aa15.52■□□□□ 0.07
CDH3-201ENST00000264012 TULP4Q9NRJ4 1543 aa15.52■□□□□ 0.07
CDH3-201ENST00000264012 LRMPQ12912 555 aa15.51■□□□□ 0.07
CDH3-201ENST00000264012 CCDC97Q96F63 343 aaPredicted RBP15.51■□□□□ 0.07
CDH3-201ENST00000264012 FTOQ9C0B1 505 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDH3-201ENST00000264012 BSDC1Q9NW68 430 aaPredicted RBP15.51■□□□□ 0.07
CDH3-201ENST00000264012 CTTNBP2NLQ9P2B4 639 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms