RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 DDX49Q9Y6V7 483 aaKnown RBP26.43■■□□□ 1.82
SMARCB1-201ENST00000263121 ZC3H4Q9UPT8 1303 aaKnown RBP26.43■■□□□ 1.82
SMARCB1-201ENST00000263121 SRCAPQ6ZRS2 3230 aa26.42■■□□□ 1.82
SMARCB1-201ENST00000263121 VEGFAP15692 232 aaPredicted RBP26.42■■□□□ 1.82
SMARCB1-201ENST00000263121 MYSM1Q5VVJ2 828 aa26.42■■□□□ 1.82
SMARCB1-201ENST00000263121 DIS3L2Q8IYB7 885 aaKnown RBP26.42■■□□□ 1.82
SMARCB1-201ENST00000263121 DCAF4Q8WV16 495 aa26.42■■□□□ 1.82
SMARCB1-201ENST00000263121 PIBF1Q8WXW3 757 aa26.42■■□□□ 1.82
SMARCB1-201ENST00000263121 FOXP1Q9H334 677 aaPredicted RBP26.42■■□□□ 1.82
SMARCB1-201ENST00000263121 BAZ2BQ9UIF8 2168 aaKnown RBP26.42■■□□□ 1.82
SMARCB1-201ENST00000263121 GPT2Q8TD30 523 aa26.41■■□□□ 1.82
SMARCB1-201ENST00000263121 LEO1Q8WVC0 666 aaPredicted RBP26.41■■□□□ 1.82
SMARCB1-201ENST00000263121 L3MBTL3Q96JM7 780 aaPredicted RBP26.41■■□□□ 1.82
SMARCB1-201ENST00000263121 SH3GLB2Q9NR46 395 aa26.41■■□□□ 1.82
SMARCB1-201ENST00000263121 PPP2R3BQ9Y5P8 575 aa26.41■■□□□ 1.82
SMARCB1-201ENST00000263121 PITPNM2Q9BZ72 1349 aa26.41■■□□□ 1.82
SMARCB1-201ENST00000263121 ATAD5Q96QE3 1844 aa26.41■■□□□ 1.82
SMARCB1-201ENST00000263121 BTBD18B2RXH4 712 aa26.41■■□□□ 1.82
SMARCB1-201ENST00000263121 GADD45BO75293 160 aaPredicted RBP26.41■■□□□ 1.82
SMARCB1-201ENST00000263121 NBPF12Q5TAG4 269 aaPredicted RBP26.41■■□□□ 1.82
SMARCB1-201ENST00000263121 SLFN13Q68D06 897 aa26.41■■□□□ 1.82
SMARCB1-201ENST00000263121 USP28Q96RU2 1077 aa26.41■■□□□ 1.82
SMARCB1-201ENST00000263121 A0A1W2PRG0 241 aa26.4■■□□□ 1.82
SMARCB1-201ENST00000263121 GNL2Q13823 731 aaKnown RBP26.4■■□□□ 1.82
SMARCB1-201ENST00000263121 DPY19L2Q6NUT2 758 aa26.4■■□□□ 1.82
SMARCB1-201ENST00000263121 SPATA32Q96LK8 384 aa26.4■■□□□ 1.82
SMARCB1-201ENST00000263121 UBA5Q9GZZ9 404 aa26.4■■□□□ 1.82
SMARCB1-201ENST00000263121 ARHGEF10LQ9HCE6 1279 aa26.4■■□□□ 1.82
SMARCB1-201ENST00000263121 GPCPD1Q9NPB8 672 aa26.4■■□□□ 1.82
SMARCB1-201ENST00000263121 F5H6K3 240 aa26.39■■□□□ 1.82
SMARCB1-201ENST00000263121 MBD3O95983 291 aa26.39■■□□□ 1.82
SMARCB1-201ENST00000263121 KLRC3Q07444 240 aa26.39■■□□□ 1.82
SMARCB1-201ENST00000263121 NPY5RQ15761 445 aa26.39■■□□□ 1.82
SMARCB1-201ENST00000263121 CCDC96Q2M329 555 aa26.39■■□□□ 1.82
SMARCB1-201ENST00000263121 NOSTRINQ8IVI9 506 aa26.39■■□□□ 1.82
SMARCB1-201ENST00000263121 RRP36Q96EU6 259 aaKnown RBP26.39■■□□□ 1.82
SMARCB1-201ENST00000263121 GMCL1Q96IK5 515 aa26.39■■□□□ 1.82
SMARCB1-201ENST00000263121 ASNSP08243 561 aa26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 UBE2HP62256 183 aa26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 FAM177A1Q8N128 213 aaPredicted RBP26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 OXER1Q8TDS5 423 aa26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 HOOK2Q96ED9 719 aa26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 FTOQ9C0B1 505 aaKnown RBP eCLIP26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 TMX2Q9Y320 296 aa26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 DCAF15Q66K64 600 aa26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 WWC2Q6AWC2 1192 aa26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 KCTD1Q719H9 257 aa26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 GPKOWQ92917 476 aaPredicted RBP eCLIP26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 GINM1Q9NU53 330 aa26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 RTEL1Q9NZ71 1219 aa26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 RCOR1Q9UKL0 485 aa26.38■■□□□ 1.81
SMARCB1-201ENST00000263121 NDUFB10O96000 172 aa26.37■■□□□ 1.81
SMARCB1-201ENST00000263121 KRT2P35908 639 aa26.37■■□□□ 1.81
SMARCB1-201ENST00000263121 SLC1A4P43007 532 aa26.37■■□□□ 1.81
SMARCB1-201ENST00000263121 NR5A1Q13285 461 aa26.37■■□□□ 1.81
SMARCB1-201ENST00000263121 TTBK2Q6IQ55 1244 aa26.37■■□□□ 1.81
SMARCB1-201ENST00000263121 ACER1Q8TDN7 264 aa26.37■■□□□ 1.81
SMARCB1-201ENST00000263121 PIGSQ96S52 555 aa26.37■■□□□ 1.81
SMARCB1-201ENST00000263121 POLR3EQ9NVU0 708 aa26.37■■□□□ 1.81
SMARCB1-201ENST00000263121 BARHL2Q9NY43 387 aa26.37■■□□□ 1.81
SMARCB1-201ENST00000263121 STXBP3O00186 592 aa26.36■■□□□ 1.81
SMARCB1-201ENST00000263121 ECE1P42892 770 aa26.36■■□□□ 1.81
SMARCB1-201ENST00000263121 TYW1BQ6NUM6 668 aa26.36■■□□□ 1.81
SMARCB1-201ENST00000263121 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.36■■□□□ 1.81
SMARCB1-201ENST00000263121 SEC63Q9UGP8 760 aaKnown RBP26.36■■□□□ 1.81
SMARCB1-201ENST00000263121 CTNND1O60716 968 aaKnown RBP26.35■■□□□ 1.81
SMARCB1-201ENST00000263121 CEBPZQ03701 1054 aaKnown RBP26.35■■□□□ 1.81
SMARCB1-201ENST00000263121 ZNF341Q9BYN7 854 aa26.35■■□□□ 1.81
SMARCB1-201ENST00000263121 JMJD4Q9H9V9 463 aa26.35■■□□□ 1.81
SMARCB1-201ENST00000263121 VAT1LQ9HCJ6 419 aa26.35■■□□□ 1.81
SMARCB1-201ENST00000263121 BRMS1Q9HCU9 246 aa26.35■■□□□ 1.81
SMARCB1-201ENST00000263121 ZNF112Q9UJU3 913 aa26.35■■□□□ 1.81
SMARCB1-201ENST00000263121 SSC5DA1L4H1 1573 aa26.35■■□□□ 1.81
SMARCB1-201ENST00000263121 NASPP49321 788 aaPredicted RBP26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 NLRP5P59047 1200 aa26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 HEATR3Q7Z4Q2 680 aa26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 HOMER1Q86YM7 354 aa26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 ADGRF4Q8IZF3 695 aa26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 CCDC148Q8NFR7 591 aa26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 TNFRSF25Q93038 417 aa26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 MTMR8Q96EF0 704 aa26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 GLTPD2A6NH11 291 aa26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 RAD21O60216 631 aa26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 CALML3P27482 149 aa26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 PRAMEF18Q5VWM3 479 aa26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 CLIC4Q9Y696 253 aa26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 DOCK1Q14185 1865 aa26.34■■□□□ 1.81
SMARCB1-201ENST00000263121 hCG_1984214I3L0E3 225 aa26.33■■□□□ 1.81
SMARCB1-201ENST00000263121 YEATS4O95619 227 aa26.33■■□□□ 1.81
SMARCB1-201ENST00000263121 ZNF713Q8N859 430 aaPredicted RBP26.33■■□□□ 1.81
SMARCB1-201ENST00000263121 SH2D4AQ9H788 454 aa26.33■■□□□ 1.81
SMARCB1-201ENST00000263121 GOPCQ9HD26 462 aa26.33■■□□□ 1.81
SMARCB1-201ENST00000263121 POLR2AP24928 1970 aaKnown RBP26.32■■□□□ 1.8
SMARCB1-201ENST00000263121 SLC16A2P36021 539 aa26.32■■□□□ 1.8
SMARCB1-201ENST00000263121 ANO1Q5XXA6 986 aa26.32■■□□□ 1.8
SMARCB1-201ENST00000263121 USP50Q70EL3 339 aaPredicted RBP26.32■■□□□ 1.8
SMARCB1-201ENST00000263121 DAGLBQ8NCG7 672 aa26.32■■□□□ 1.8
SMARCB1-201ENST00000263121 LINC00301Q8NCQ3 95 aa26.32■■□□□ 1.8
SMARCB1-201ENST00000263121 BMP3P12645 472 aa26.31■■□□□ 1.8
SMARCB1-201ENST00000263121 KIAA1755Q5JYT7 1200 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms