RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ADCY7P51828 1080 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 FAM133BQ5BKY9 247 aaKnown RBP13.31□□□□□ -0.28
SMG6-201ENST00000263073 ZNF790Q6PG37 636 aa13.31□□□□□ -0.28
SMG6-201ENST00000263073 DDX17Q92841 729 aaKnown RBP13.31□□□□□ -0.28
SMG6-201ENST00000263073 KCNQ3O43525 872 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 PPFIA4O75335 1185 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 COG7P83436 770 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 ZKSCAN8Q15776 578 aaPredicted RBP13.3□□□□□ -0.28
SMG6-201ENST00000263073 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 KLHL14Q9P2G3 628 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 ATP10BO94823 1461 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 DCAF8L1A6NGE4 600 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 SOWAHDA6NJG2 315 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 ACRBPQ8NEB7 543 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 TGFBRAP1Q8WUH2 860 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 SDR42E1Q8WUS8 393 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 EFCC1Q9HA90 598 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 WDR7Q9Y4E6 1490 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 BTBD18B2RXH4 712 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 B4DLN1 442 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 CD19P15391 556 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 TBC1D10BQ4KMP7 808 aaPredicted RBP13.3□□□□□ -0.28
SMG6-201ENST00000263073 SYCE1Q8N0S2 351 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 SPATA5Q8NB90 893 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 TRIM58Q8NG06 486 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 FAM71BQ8TC56 605 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 TCP11Q8WWU5 503 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 DNM3Q9UQ16 869 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 HAUS3Q68CZ6 603 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 JPH2Q9BR39 696 aaPredicted RBP13.3□□□□□ -0.28
SMG6-201ENST00000263073 DENND2AQ9ULE3 1009 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 SLC7A5Q01650 507 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 CEP128Q6ZU80 1094 aa13.3□□□□□ -0.28
SMG6-201ENST00000263073 MPHOSPH6Q99547 160 aaKnown RBP13.3□□□□□ -0.28
SMG6-201ENST00000263073 SAT1P21673 171 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 SMTNP53814 917 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 KIF22Q14807 665 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 LRCH2Q5VUJ6 765 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 PALM2Q8IXS6 379 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 PLBD2Q8NHP8 589 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 HIP1RO75146 1068 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 SYMPKQ92797 1274 aaKnown RBP13.29□□□□□ -0.28
SMG6-201ENST00000263073 RAB17Q9H0T7 212 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 HDAC9Q9UKV0 1011 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 UFL1O94874 794 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 HIBADHP31937 336 aaKnown RBP13.29□□□□□ -0.28
SMG6-201ENST00000263073 NOSTRINQ8IVI9 506 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 CPXCR1Q8N123 301 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 CFBP00751 764 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 IL2RBP14784 551 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 ATF7P17544 494 aaPredicted RBP13.29□□□□□ -0.28
SMG6-201ENST00000263073 AOX1Q06278 1338 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 TFAP4Q01664 338 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 PHLDB2Q86SQ0 1253 aa13.29□□□□□ -0.28
SMG6-201ENST00000263073 PPP1R2P41236 205 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 CLCN6P51797 869 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 STRN3Q13033 797 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 CFAP61Q8NHU2 1237 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 TSKSQ9UJT2 592 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 CHL1O00533 1208 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 THAP12O43422 761 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 TPTE2Q6XPS3 522 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 GPBP1Q86WP2 473 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMG6-201ENST00000263073 ZSWIM6Q9HCJ5 1215 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 RNF123Q5XPI4 1314 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 NUP153P49790 1475 aaKnown RBP13.28□□□□□ -0.28
SMG6-201ENST00000263073 SMCO2A6NFE2 343 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 SATB1Q01826 763 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMG6-201ENST00000263073 TLR7Q9NYK1 1049 aaKnown RBP13.28□□□□□ -0.28
SMG6-201ENST00000263073 ERBB4Q15303 1308 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 A6NNZ2 444 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 SLCO1A2P46721 670 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 GCKRQ14397 625 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 TUBB8Q3ZCM7 444 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 ZNF654Q8IZM8 581 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 ARHGAP24Q8N264 748 aa13.28□□□□□ -0.28
SMG6-201ENST00000263073 RAB3IPQ96QF0 476 aaPredicted RBP13.28□□□□□ -0.28
SMG6-201ENST00000263073 EPN1Q9Y6I3 576 aaPredicted RBP13.28□□□□□ -0.28
SMG6-201ENST00000263073 EIF4E1BA6NMX2 242 aaKnown RBP13.27□□□□□ -0.28
SMG6-201ENST00000263073 POC1B-GALNT4F8VUJ3 575 aa13.27□□□□□ -0.28
SMG6-201ENST00000263073 SRGAP1Q7Z6B7 1085 aa13.27□□□□□ -0.28
SMG6-201ENST00000263073 EAF2Q96CJ1 260 aaPredicted RBP13.27□□□□□ -0.28
SMG6-201ENST00000263073 MRFAP1L1Q96HT8 127 aa13.27□□□□□ -0.28
SMG6-201ENST00000263073 GCP02774 474 aa13.27□□□□□ -0.28
SMG6-201ENST00000263073 TROVE2P10155 538 aaKnown RBP eCLIP13.27□□□□□ -0.28
SMG6-201ENST00000263073 GABPAQ06546 454 aa13.27□□□□□ -0.28
SMG6-201ENST00000263073 NCBP1Q09161 790 aaKnown RBP13.27□□□□□ -0.28
SMG6-201ENST00000263073 MORC4Q8TE76 937 aa13.27□□□□□ -0.28
SMG6-201ENST00000263073 ST7Q9NRC1 585 aa13.27□□□□□ -0.28
SMG6-201ENST00000263073 RABGAP1Q9Y3P9 1069 aa13.27□□□□□ -0.28
SMG6-201ENST00000263073 SMIM24O75264 130 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 BCRP11274 1271 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 PLCG2P16885 1265 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 SERPINB6P35237 376 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 PDE6BP35913 854 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 PPARAQ07869 468 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 SNX1Q13596 522 aa13.27□□□□□ -0.29
SMG6-201ENST00000263073 RCN2Q14257 317 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms