RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 MAP7D1Q3KQU3 841 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 AKNAD1Q5T1N1 836 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 BEND3Q5T5X7 828 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 CHST3Q7LGC8 479 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 ARHGAP22Q7Z5H3 698 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 AMOTL1Q8IY63 956 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 ZNF396Q96N95 335 aaPredicted RBP9.33□□□□□ -0.92
LDB3-201ENST00000263066 JADE2Q9NQC1 790 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 RGL1Q9NZL6 768 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 STK38LQ9Y2H1 464 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 RPS6KL1Q9Y6S9 549 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 RAD17O75943 681 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 DNA2P51530 1060 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 NFIXQ14938 502 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 EAPPQ56P03 285 aaPredicted RBP9.33□□□□□ -0.92
LDB3-201ENST00000263066 TMEM87AQ8NBN3 555 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 NYXQ9GZU5 481 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 SH2B1Q9NRF2 756 aaPredicted RBP9.33□□□□□ -0.92
LDB3-201ENST00000263066 RGPD5Q99666 1765 aa9.33□□□□□ -0.92
LDB3-201ENST00000263066 PDE8AO60658 829 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 RAB11FIP3O75154 756 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 ALDH1L1O75891 902 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 IGKV5-2P06315 115 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 IL6STP40189 918 aaPredicted RBP9.32□□□□□ -0.92
LDB3-201ENST00000263066 BCAMP50895 628 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 SCNN1BP51168 640 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 SLC8A3P57103 927 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 LONRF3Q496Y0 759 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 CCDC129Q6ZRS4 1044 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 TRMT1LQ7Z2T5 733 aaKnown RBP9.32□□□□□ -0.92
LDB3-201ENST00000263066 FUCA2Q9BTY2 467 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 CDC23Q9UJX2 597 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 RTL1A6NKG5 1358 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 PPIP5K2O43314 1243 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 POLR3DP05423 398 aaPredicted RBP9.32□□□□□ -0.92
LDB3-201ENST00000263066 PDHA1P08559 390 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 GTF2IP78347 998 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 BEND6Q5SZJ8 279 aaPredicted RBP9.32□□□□□ -0.92
LDB3-201ENST00000263066 SLC9C2Q5TAH2 1124 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 WDR78Q5VTH9 848 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 RINLQ6ZS11 566 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 SPATA21Q7Z572 469 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 NLRP10Q86W26 655 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 NLGN1Q8N2Q7 840 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 ANKRD44Q8N8A2 993 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 IRX2Q9BZI1 471 aaPredicted RBP9.32□□□□□ -0.92
LDB3-201ENST00000263066 DDX20Q9UHI6 824 aaKnown RBP9.32□□□□□ -0.92
LDB3-201ENST00000263066 GUCA1BQ9UMX6 200 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 PDE1AP54750 535 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 TUBB4BP68371 445 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 RASIP1Q5U651 963 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 ARMCX5Q6P1M9 558 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 SDCCAG8Q86SQ7 713 aaPredicted RBP9.32□□□□□ -0.92
LDB3-201ENST00000263066 GSPT2Q8IYD1 628 aaKnown RBP9.32□□□□□ -0.92
LDB3-201ENST00000263066 EHBP1Q8NDI1 1231 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 ECHDC1Q9NTX5 307 aa9.32□□□□□ -0.92
LDB3-201ENST00000263066 CDK12Q9NYV4 1490 aaPredicted RBP9.32□□□□□ -0.92
LDB3-201ENST00000263066 DIAPH2O60879 1101 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 MTA1Q13330 715 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 TAF11Q15544 211 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 IQCEQ6IPM2 695 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 CYB5D1Q6P9G0 228 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 CCDC13Q8IYE1 715 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 PCMTD1Q96MG8 357 aaPredicted RBP9.31□□□□□ -0.92
LDB3-201ENST00000263066 CPLX1O14810 134 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 CETN3O15182 167 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 RANBP6O60518 1105 aaKnown RBP9.31□□□□□ -0.92
LDB3-201ENST00000263066 ATP6V1G1O75348 118 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 RPS6KA4O75676 772 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 IFFO1Q0D2I5 559 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 CRACR2BQ8N4Y2 399 aaPredicted RBP9.31□□□□□ -0.92
LDB3-201ENST00000263066 NAPGQ99747 312 aaPredicted RBP9.31□□□□□ -0.92
LDB3-201ENST00000263066 TCHPQ9BT92 498 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 CYP7A1P22680 504 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 ADORA1P30542 326 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 CFAP58Q5T655 872 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 CELF1Q92879 486 aaKnown RBP9.31□□□□□ -0.92
LDB3-201ENST00000263066 PNKPQ96T60 521 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 LRRC4BQ9NT99 713 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 TLR7Q9NYK1 1049 aaKnown RBP9.31□□□□□ -0.92
LDB3-201ENST00000263066 A0A1B0GVL5 298 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 CEP104O60308 925 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 RPS6KA5O75582 802 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 UPP2O95045 317 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 LUC7L3O95232 432 aaKnown RBP9.31□□□□□ -0.92
LDB3-201ENST00000263066 CTCFP49711 727 aaPredicted RBP9.31□□□□□ -0.92
LDB3-201ENST00000263066 RCSD1Q6JBY9 416 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 BLOC1S2Q6QNY1 142 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 ZNF365Q70YC5 407 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 TBC1D1Q86TI0 1168 aaPredicted RBP9.31□□□□□ -0.92
LDB3-201ENST00000263066 CCDC63Q8NA47 563 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 KCNV2Q8TDN2 545 aa9.31□□□□□ -0.92
LDB3-201ENST00000263066 MMADHCQ9H3L0 296 aaPredicted RBP9.31□□□□□ -0.92
LDB3-201ENST00000263066 CTDP1Q9Y5B0 961 aaPredicted RBP9.31□□□□□ -0.92
LDB3-201ENST00000263066 EIF3HO15372 352 aaKnown RBP eCLIP9.3□□□□□ -0.92
LDB3-201ENST00000263066 PRDM1O75626 825 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 C11orf91Q3C1V1 193 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 CCDC38Q502W7 563 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 KLHL10Q6JEL2 608 aa9.3□□□□□ -0.92
LDB3-201ENST00000263066 FNBP4Q8N3X1 1017 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms