RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 IDI2Q9BXS1 227 aa9.27□□□□□ -0.93
PTPN3-201ENST00000262539 RGPD8O14715 1765 aaPredicted RBP9.27□□□□□ -0.93
PTPN3-201ENST00000262539 GTPBP6O43824 516 aaPredicted RBP9.27□□□□□ -0.93
PTPN3-201ENST00000262539 CTR9Q6PD62 1173 aa9.27□□□□□ -0.93
PTPN3-201ENST00000262539 EHBP1Q8NDI1 1231 aa9.27□□□□□ -0.93
PTPN3-201ENST00000262539 GDPD2Q9HCC8 539 aa9.27□□□□□ -0.93
PTPN3-201ENST00000262539 NWD2Q9ULI1 1742 aa9.27□□□□□ -0.93
PTPN3-201ENST00000262539 KLRF2D3W0D1 207 aa9.27□□□□□ -0.93
PTPN3-201ENST00000262539 ZNF202O95125 648 aa9.27□□□□□ -0.93
PTPN3-201ENST00000262539 JAKMIP3Q5VZ66 844 aa9.27□□□□□ -0.93
PTPN3-201ENST00000262539 KRBA2Q6ZNG9 492 aa9.27□□□□□ -0.93
PTPN3-201ENST00000262539 AMNQ9BXJ7 453 aa9.27□□□□□ -0.93
PTPN3-201ENST00000262539 SEC23AQ15436 765 aa9.27□□□□□ -0.93
PTPN3-201ENST00000262539 RBM26Q5T8P6 1007 aaKnown RBP9.27□□□□□ -0.93
PTPN3-201ENST00000262539 NDUFB9Q9Y6M9 179 aa9.27□□□□□ -0.93
PTPN3-201ENST00000262539 ABCD1P33897 745 aa9.26□□□□□ -0.93
PTPN3-201ENST00000262539 EPB41L4AQ9HCS5 686 aaPredicted RBP9.26□□□□□ -0.93
PTPN3-201ENST00000262539 PRDX5P30044 214 aa9.26□□□□□ -0.93
PTPN3-201ENST00000262539 SLC1A4P43007 532 aa9.26□□□□□ -0.93
PTPN3-201ENST00000262539 USP37Q86T82 979 aa9.26□□□□□ -0.93
PTPN3-201ENST00000262539 PCDHA4Q9UN74 947 aa9.26□□□□□ -0.93
PTPN3-201ENST00000262539 PPIP5K2O43314 1243 aa9.26□□□□□ -0.93
PTPN3-201ENST00000262539 ZNF500O60304 480 aaPredicted RBP9.26□□□□□ -0.93
PTPN3-201ENST00000262539 C16orf86Q6ZW13 317 aa9.26□□□□□ -0.93
PTPN3-201ENST00000262539 NEK8Q86SG6 692 aa9.26□□□□□ -0.93
PTPN3-201ENST00000262539 ENAHQ8N8S7 591 aaPredicted RBP9.26□□□□□ -0.93
PTPN3-201ENST00000262539 LMOD1P29536 600 aaPredicted RBP9.26□□□□□ -0.93
PTPN3-201ENST00000262539 CENPHQ9H3R5 247 aa9.26□□□□□ -0.93
PTPN3-201ENST00000262539 EIF6P56537 245 aaKnown RBP9.26□□□□□ -0.93
PTPN3-201ENST00000262539 CTDSPL2Q05D32 466 aa9.26□□□□□ -0.93
PTPN3-201ENST00000262539 AXDND1Q5T1B0 1012 aaPredicted RBP9.26□□□□□ -0.93
PTPN3-201ENST00000262539 MAPKAPK5Q8IW41 473 aa9.26□□□□□ -0.93
PTPN3-201ENST00000262539 SYNE4Q8N205 404 aa9.26□□□□□ -0.93
PTPN3-201ENST00000262539 POLRMTO00411 1230 aaKnown RBP9.25□□□□□ -0.93
PTPN3-201ENST00000262539 TBX3O15119 743 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 ADCY5O95622 1261 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 ENOX1Q8TC92 643 aaKnown RBP9.25□□□□□ -0.93
PTPN3-201ENST00000262539 TGFBRAP1Q8WUH2 860 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 DAAM1Q9Y4D1 1078 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 H0YHG0 523 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 FKBP15Q5T1M5 1219 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 KRT26Q7Z3Y9 468 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 SLC17A8Q8NDX2 589 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 GPT2Q8TD30 523 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 NAA15Q9BXJ9 866 aaKnown RBP9.25□□□□□ -0.93
PTPN3-201ENST00000262539 SAMM50Q9Y512 469 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 SPDYE3A6NKU9 549 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 SCP2P22307 547 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 USP14P54578 494 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 NUCKS1Q9H1E3 243 aaKnown RBP9.25□□□□□ -0.93
PTPN3-201ENST00000262539 AS3MTQ9HBK9 375 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 DAGLAQ9Y4D2 1042 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 PFKFB1P16118 471 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 ARHGAP27Q6ZUM4 889 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 CCDC84Q86UT8 332 aaPredicted RBP9.25□□□□□ -0.93
PTPN3-201ENST00000262539 PLS1Q14651 629 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 CFAP100Q494V2 611 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 RRAGBQ5VZM2 374 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 CNGA4Q8IV77 575 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 CLIP2Q9UDT6 1046 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 TUBE1Q9UJT0 475 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 PAXBP1Q9Y5B6 917 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 BTBD18B2RXH4 712 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 PRDM1O75626 825 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 TGFB2P61812 414 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 CCSER1Q9C0I3 900 aa9.25□□□□□ -0.93
PTPN3-201ENST00000262539 LAMB4A4D0S4 1761 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 ASNSP08243 561 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 CETN2P41208 172 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 PKP1Q13835 747 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 ANO6Q4KMQ2 910 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 CKAP2LQ8IYA6 745 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 SLFN12Q8IYM2 578 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 NEK9Q8TD19 979 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 GUCY1B3Q02153 619 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 FOXR2Q6PJQ5 311 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 PLIN4Q96Q06 1357 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 SSX2IPQ9Y2D8 614 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 CDK8P49336 464 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 SMYD5Q6GMV2 418 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 SDR42E1Q8WUS8 393 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 ZDHHC15Q96MV8 337 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 IWS1Q96ST2 819 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 MRPL11Q9Y3B7 192 aaKnown RBP9.24□□□□□ -0.93
PTPN3-201ENST00000262539 PVALEFA0A1B0GWK0 134 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 OR52Z1P0C646 297 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 ICA1Q05084 483 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 CNNM4Q6P4Q7 775 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 FDPSP14324 419 aaKnown RBP9.24□□□□□ -0.93
PTPN3-201ENST00000262539 COPB2P35606 906 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 STAT6P42226 847 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 NTRK3Q16288 839 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 MCF2L2Q86YR7 1114 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 ZNF710Q8N1W2 664 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 RBSNQ9H1K0 784 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 BRPF3Q9ULD4 1205 aa9.24□□□□□ -0.93
PTPN3-201ENST00000262539 PLCH1Q4KWH8 1693 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 MUTP22033 750 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 XRRA1Q6P2D8 792 aa9.23□□□□□ -0.93
PTPN3-201ENST00000262539 PIM2Q9P1W9 311 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms