RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 STK36Q9NRP7 1315 aa16.55■□□□□ 0.24
FOXF1-201ENST00000262426 KIAA1551Q9HCM1 1747 aa16.55■□□□□ 0.24
FOXF1-201ENST00000262426 TRIM66O15016 1216 aa16.55■□□□□ 0.24
FOXF1-201ENST00000262426 PTPAQ15257 358 aa16.55■□□□□ 0.24
FOXF1-201ENST00000262426 TYW1BQ6NUM6 668 aa16.55■□□□□ 0.24
FOXF1-201ENST00000262426 LOC102724159A0A0B4J2E5 919 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 DDTLA6NHG4 134 aaPredicted RBP16.54■□□□□ 0.24
FOXF1-201ENST00000262426 NLRP5P59047 1200 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 PWP2Q15269 919 aaKnown RBP16.54■□□□□ 0.24
FOXF1-201ENST00000262426 SHC4Q6S5L8 630 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 USP49Q70CQ1 688 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 KCNG4Q8TDN1 519 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 MAD2L2Q9UI95 211 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 CLRN2A0PK11 232 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 PRPF3O43395 683 aaKnown RBP16.54■□□□□ 0.24
FOXF1-201ENST00000262426 DDAH1O94760 285 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 PFKFB1P16118 471 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 HMGB2P26583 209 aaKnown RBP16.54■□□□□ 0.24
FOXF1-201ENST00000262426 FAM160A1Q05DH4 1040 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 ZNF174Q15697 407 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 GPATCH11Q8N954 259 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 RGS22Q8NE09 1264 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 MTA3Q9BTC8 594 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 TTLL6Q8N841 843 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 CLIP2Q9UDT6 1046 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 LTBP1Q14766 1721 aa16.54■□□□□ 0.24
FOXF1-201ENST00000262426 USP17L5A8MUK1 530 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 YEATS4O95619 227 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 ARID5BQ14865 1188 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 PIK3AP1Q6ZUJ8 805 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 HEATR3Q7Z4Q2 680 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 DGKHQ86XP1 1220 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 FMR1NBQ8N0W7 255 aaPredicted RBP16.53■□□□□ 0.24
FOXF1-201ENST00000262426 CALCOCO1Q9P1Z2 691 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 CALM1P0DP23 149 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 CALM2P0DP24 149 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 CALM3P0DP25 149 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 FBXO38Q6PIJ6 1188 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 PRMT6Q96LA8 375 aaPredicted RBP16.53■□□□□ 0.24
FOXF1-201ENST00000262426 RBM28Q9NW13 759 aaKnown RBP16.53■□□□□ 0.24
FOXF1-201ENST00000262426 ECM29Q5VYK3 1845 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 ZNF202O95125 648 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 KCNA3P22001 575 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 SKIDA1Q1XH10 827 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 C11orf57Q6ZUT1 292 aaPredicted RBP16.53■□□□□ 0.24
FOXF1-201ENST00000262426 SERPINB13Q9UIV8 391 aa16.53■□□□□ 0.24
FOXF1-201ENST00000262426 KLRF2D3W0D1 207 aa16.52■□□□□ 0.24
FOXF1-201ENST00000262426 SCG2P13521 617 aa16.52■□□□□ 0.24
FOXF1-201ENST00000262426 RAD51AP2Q09MP3 1159 aa16.52■□□□□ 0.24
FOXF1-201ENST00000262426 LARGE2Q8N3Y3 721 aa16.52■□□□□ 0.24
FOXF1-201ENST00000262426 PHF20Q9BVI0 1012 aa16.52■□□□□ 0.24
FOXF1-201ENST00000262426 TRIM5Q9C035 493 aa16.52■□□□□ 0.24
FOXF1-201ENST00000262426 OSBPL5Q9H0X9 879 aaPredicted RBP16.52■□□□□ 0.24
FOXF1-201ENST00000262426 NRXN2Q9P2S2 1712 aa16.52■□□□□ 0.24
FOXF1-201ENST00000262426 SNED1Q8TER0 1413 aa16.52■□□□□ 0.24
FOXF1-201ENST00000262426 FOXN1O15353 648 aa16.52■□□□□ 0.23
FOXF1-201ENST00000262426 PRR29P0C7W0 189 aa16.52■□□□□ 0.23
FOXF1-201ENST00000262426 NPY5RQ15761 445 aa16.52■□□□□ 0.23
FOXF1-201ENST00000262426 ILDR2Q71H61 639 aa16.52■□□□□ 0.23
FOXF1-201ENST00000262426 GPCPD1Q9NPB8 672 aa16.52■□□□□ 0.23
FOXF1-201ENST00000262426 FEZ2Q9UHY8 353 aaPredicted RBP16.52■□□□□ 0.23
FOXF1-201ENST00000262426 LRRC37AA6NMS7 1700 aa16.52■□□□□ 0.23
FOXF1-201ENST00000262426 PSDA5PKW4 1024 aaPredicted RBP16.52■□□□□ 0.23
FOXF1-201ENST00000262426 USP27XA6NNY8 438 aa16.52■□□□□ 0.23
FOXF1-201ENST00000262426 STRIP1Q5VSL9 837 aa16.52■□□□□ 0.23
FOXF1-201ENST00000262426 CTIFO43310 598 aaKnown RBP16.51■□□□□ 0.23
FOXF1-201ENST00000262426 KRT2P35908 639 aa16.51■□□□□ 0.23
FOXF1-201ENST00000262426 ATL3Q6DD88 541 aa16.51■□□□□ 0.23
FOXF1-201ENST00000262426 CBX8Q9HC52 389 aa16.51■□□□□ 0.23
FOXF1-201ENST00000262426 MAST2Q6P0Q8 1798 aa16.51■□□□□ 0.23
FOXF1-201ENST00000262426 TCP10L2B9ZVM9 353 aa16.51■□□□□ 0.23
FOXF1-201ENST00000262426 GDF11O95390 407 aa16.51■□□□□ 0.23
FOXF1-201ENST00000262426 XBP1P17861 261 aa16.51■□□□□ 0.23
FOXF1-201ENST00000262426 R3HDM1Q15032 1099 aaKnown RBP16.51■□□□□ 0.23
FOXF1-201ENST00000262426 NEDD1Q8NHV4 660 aa16.51■□□□□ 0.23
FOXF1-201ENST00000262426 MYH6P13533 1939 aa16.51■□□□□ 0.23
FOXF1-201ENST00000262426 NID2Q14112 1375 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 SHTN1A0MZ66 631 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 KIF5BP33176 963 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 SLC16A2P36021 539 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 FOXP1Q9H334 677 aaPredicted RBP16.5■□□□□ 0.23
FOXF1-201ENST00000262426 DNAJC18Q9H819 358 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 FAM198AQ9UFP1 575 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 MYH15Q9Y2K3 1946 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 SH3BP5LQ7L8J4 393 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 GRAMD1CQ8IYS0 662 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 MYH1P12882 1939 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 CDK5RAP2Q96SN8 1893 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 CDC25AP30304 524 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 ZNF165P49910 485 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 CFAP100Q494V2 611 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 CDAN1Q8IWY9 1227 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 NAV1Q8NEY1 1877 aa16.5■□□□□ 0.23
FOXF1-201ENST00000262426 MYCNP04198 464 aaPredicted RBP16.49■□□□□ 0.23
FOXF1-201ENST00000262426 MCM7P33993 719 aa16.49■□□□□ 0.23
FOXF1-201ENST00000262426 SHMT1P34896 483 aa16.49■□□□□ 0.23
FOXF1-201ENST00000262426 SYKP43405 635 aa16.49■□□□□ 0.23
FOXF1-201ENST00000262426 TTBK2Q6IQ55 1244 aa16.49■□□□□ 0.23
FOXF1-201ENST00000262426 ZCCHC17Q9NP64 241 aaKnown RBP16.49■□□□□ 0.23
FOXF1-201ENST00000262426 ROBO3Q96MS0 1386 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms