RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 DCAF15Q66K64 600 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 NLGN1Q8N2Q7 840 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 RBSNQ9H1K0 784 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 SLC5A4Q9NY91 659 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 ADAT2Q7Z6V5 191 aaKnown RBP13.48□□□□□ -0.25
SPG11-201ENST00000261866 CHAMP1Q96JM3 812 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 HINFPQ9BQA5 517 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 NSRP1Q9H0G5 558 aaKnown RBP13.48□□□□□ -0.25
SPG11-201ENST00000261866 AKT3Q9Y243 479 aa13.48□□□□□ -0.25
SPG11-201ENST00000261866 PALM3A6NDB9 673 aaPredicted RBP13.47□□□□□ -0.25
SPG11-201ENST00000261866 HSPD1P10809 573 aaKnown RBP13.47□□□□□ -0.25
SPG11-201ENST00000261866 ATP5JP18859 108 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 MAN1A1P33908 653 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 POLGP54098 1239 aaPredicted RBP13.47□□□□□ -0.25
SPG11-201ENST00000261866 HOXB7P09629 217 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 DYNLL2Q96FJ2 89 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 SLF1Q9BQI6 1058 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 ANTXR1Q9H6X2 564 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 CEP104O60308 925 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 MNAT1P51948 309 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 BLIDQ8IZY5 108 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 FGAP02671 866 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 TNNC1P63316 161 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 CAPN12Q6ZSI9 719 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 NOX5Q96PH1 765 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 SLU7O95391 586 aaKnown RBP13.47□□□□□ -0.25
SPG11-201ENST00000261866 HSPA1LP34931 641 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 FLAD1Q8NFF5 587 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 TRIM7Q9C029 511 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 NBPF3Q9H094 633 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 CBX8Q9HC52 389 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 SLC39A2Q9NP94 309 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 MAGED2Q9UNF1 606 aaPredicted RBP13.47□□□□□ -0.25
SPG11-201ENST00000261866 ADKP55263 362 aaKnown RBP13.47□□□□□ -0.25
SPG11-201ENST00000261866 TCOF1Q13428 1488 aaKnown RBP13.47□□□□□ -0.25
SPG11-201ENST00000261866 U2AF1L4Q8WU68 220 aaKnown RBP13.47□□□□□ -0.25
SPG11-201ENST00000261866 PANK4Q9NVE7 773 aa13.47□□□□□ -0.25
SPG11-201ENST00000261866 CYP26C1Q6V0L0 522 aa13.46□□□□□ -0.25
SPG11-201ENST00000261866 ZNF365Q70YC5 407 aa13.46□□□□□ -0.25
SPG11-201ENST00000261866 INTS4Q96HW7 963 aaKnown RBP13.46□□□□□ -0.25
SPG11-201ENST00000261866 ASIC3Q9UHC3 531 aa13.46□□□□□ -0.25
SPG11-201ENST00000261866 KLHL30Q0D2K2 578 aa13.46□□□□□ -0.25
SPG11-201ENST00000261866 PPP4R4Q6NUP7 873 aa13.46□□□□□ -0.25
SPG11-201ENST00000261866 PCDHA12Q9UN75 941 aa13.46□□□□□ -0.25
SPG11-201ENST00000261866 OPA1O60313 960 aa13.46□□□□□ -0.25
SPG11-201ENST00000261866 CEP170Q5SW79 1584 aa13.46□□□□□ -0.25
SPG11-201ENST00000261866 PPP2R3AQ06190 1150 aa13.46□□□□□ -0.25
SPG11-201ENST00000261866 CPLX4Q7Z7G2 160 aa13.46□□□□□ -0.25
SPG11-201ENST00000261866 RPUSD2Q8IZ73 545 aaKnown RBP13.46□□□□□ -0.25
SPG11-201ENST00000261866 LRRC43Q8N309 656 aa13.46□□□□□ -0.25
SPG11-201ENST00000261866 GTF3C6Q969F1 213 aa13.46□□□□□ -0.25
SPG11-201ENST00000261866 NFE2L3Q9Y4A8 694 aa13.46□□□□□ -0.25
SPG11-201ENST00000261866 DIXDC1Q155Q3 683 aa13.46□□□□□ -0.26
SPG11-201ENST00000261866 GDAP1L1Q96MZ0 367 aa13.46□□□□□ -0.26
SPG11-201ENST00000261866 SMC6Q96SB8 1091 aa13.46□□□□□ -0.26
SPG11-201ENST00000261866 LZTS2Q9BRK4 669 aa13.46□□□□□ -0.26
SPG11-201ENST00000261866 XDHP47989 1333 aa13.46□□□□□ -0.26
SPG11-201ENST00000261866 PCCAP05165 728 aaPredicted RBP13.46□□□□□ -0.26
SPG11-201ENST00000261866 MARK3P27448 753 aa13.46□□□□□ -0.26
SPG11-201ENST00000261866 ITIH3Q06033 890 aa13.46□□□□□ -0.26
SPG11-201ENST00000261866 MRPL11Q9Y3B7 192 aaKnown RBP13.46□□□□□ -0.26
SPG11-201ENST00000261866 CAPN9O14815 690 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 GSPT1P15170 499 aaKnown RBP13.45□□□□□ -0.26
SPG11-201ENST00000261866 OSTNP61366 133 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 CEP57Q86XR8 500 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 DNMT1P26358 1616 aaKnown RBP13.45□□□□□ -0.26
SPG11-201ENST00000261866 MEIS1O00470 390 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 VIMP08670 466 aaKnown RBP13.45□□□□□ -0.26
SPG11-201ENST00000261866 NLRP12P59046 1061 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 PARP2Q9UGN5 583 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 PPME1Q9Y570 386 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 PCDHA1Q9Y5I3 950 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 DISP1Q96F81 1524 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 FOXD4Q12950 439 aaPredicted RBP13.45□□□□□ -0.26
SPG11-201ENST00000261866 DSCC1Q9BVC3 393 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 BABAM1Q9NWV8 329 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 RRP9O43818 475 aaKnown RBP13.45□□□□□ -0.26
SPG11-201ENST00000261866 HSPA4P34932 840 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 KCTD2Q14681 263 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 LLPHQ9BRT6 129 aaKnown RBP13.45□□□□□ -0.26
SPG11-201ENST00000261866 ANAPC4Q9UJX5 808 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 BUB1O43683 1085 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 PHLDB2Q86SQ0 1253 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 UBL4BQ8N7F7 174 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 FANCBQ8NB91 859 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 AFG3L2Q9Y4W6 797 aa13.45□□□□□ -0.26
SPG11-201ENST00000261866 STK10O94804 968 aaKnown RBP13.44□□□□□ -0.26
SPG11-201ENST00000261866 VAV2P52735 878 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 TEKT3Q9BXF9 490 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 GLT8D2Q9H1C3 349 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 TPCN1Q9ULQ1 816 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 PLEKHG3A1L390 1219 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 USP17L8P0C7I0 530 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 TSTA3Q13630 321 aaPredicted RBP13.44□□□□□ -0.26
SPG11-201ENST00000261866 DALRD3Q5D0E6 543 aaKnown RBP13.44□□□□□ -0.26
SPG11-201ENST00000261866 NSMCE1Q8WV22 266 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 SFMBT2Q5VUG0 894 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 STMN4Q9H169 189 aaPredicted RBP13.44□□□□□ -0.26
SPG11-201ENST00000261866 ATP8A2Q9NTI2 1148 aa13.44□□□□□ -0.26
SPG11-201ENST00000261866 NPHP4O75161 1426 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms