RNA–Protein interactions for RNA: ENST00000261692.6

CDK2AP1-201, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK2AP1, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-201ENST00000261692 CETPP11597 493 aa27.96■■■□□ 2.07
CDK2AP1-201ENST00000261692 BMP3P12645 472 aa27.96■■■□□ 2.07
CDK2AP1-201ENST00000261692 VCAM1P19320 739 aa27.96■■■□□ 2.07
CDK2AP1-201ENST00000261692 GRM4Q14833 912 aa27.96■■■□□ 2.07
CDK2AP1-201ENST00000261692 RTN1Q16799 776 aa27.96■■■□□ 2.07
CDK2AP1-201ENST00000261692 PAXIP1Q6ZW49 1069 aaPredicted RBP27.96■■■□□ 2.07
CDK2AP1-201ENST00000261692 RXRAP19793 462 aa27.95■■■□□ 2.06
CDK2AP1-201ENST00000261692 GNAQP50148 359 aa27.95■■■□□ 2.06
CDK2AP1-201ENST00000261692 ME3Q16798 604 aa27.95■■■□□ 2.06
CDK2AP1-201ENST00000261692 CCDC96Q2M329 555 aa27.95■■■□□ 2.06
CDK2AP1-201ENST00000261692 HPS5Q9UPZ3 1129 aa27.95■■■□□ 2.06
CDK2AP1-201ENST00000261692 DHX16O60231 1041 aaKnown RBP27.94■■■□□ 2.06
CDK2AP1-201ENST00000261692 PFKFB2O60825 505 aa27.94■■■□□ 2.06
CDK2AP1-201ENST00000261692 ZNF543Q08ER8 600 aa27.94■■■□□ 2.06
CDK2AP1-201ENST00000261692 MKRN3Q13064 507 aaKnown RBP27.94■■■□□ 2.06
CDK2AP1-201ENST00000261692 KIAA1755Q5JYT7 1200 aa27.94■■■□□ 2.06
CDK2AP1-201ENST00000261692 STK3Q13188 491 aa27.93■■■□□ 2.06
CDK2AP1-201ENST00000261692 RAB11FIP4Q86YS3 637 aa27.93■■■□□ 2.06
CDK2AP1-201ENST00000261692 MS4A4AQ96JQ5 239 aa27.93■■■□□ 2.06
CDK2AP1-201ENST00000261692 MAD2L2Q9UI95 211 aa27.93■■■□□ 2.06
CDK2AP1-201ENST00000261692 ISY1Q9ULR0 285 aaKnown RBP27.93■■■□□ 2.06
CDK2AP1-201ENST00000261692 PALM3A6NDB9 673 aaPredicted RBP27.92■■■□□ 2.06
CDK2AP1-201ENST00000261692 MANSC4A6NHS7 340 aaPredicted RBP27.92■■■□□ 2.06
CDK2AP1-201ENST00000261692 FAM155AB1AL88 458 aaPredicted RBP27.92■■■□□ 2.06
CDK2AP1-201ENST00000261692 K7ELQ4 463 aaPredicted RBP27.92■■■□□ 2.06
CDK2AP1-201ENST00000261692 GADL1Q6ZQY3 521 aa27.92■■■□□ 2.06
CDK2AP1-201ENST00000261692 CCDC144CPQ8IYA2 1237 aa27.92■■■□□ 2.06
CDK2AP1-201ENST00000261692 TMX3Q96JJ7 454 aa27.92■■■□□ 2.06
CDK2AP1-201ENST00000261692 C1QTNF8P60827 252 aa27.92■■■□□ 2.06
CDK2AP1-201ENST00000261692 DGKZQ13574 1117 aa27.92■■■□□ 2.06
CDK2AP1-201ENST00000261692 FAM83BQ5T0W9 1011 aa27.92■■■□□ 2.06
CDK2AP1-201ENST00000261692 GTF3C6Q969F1 213 aa27.92■■■□□ 2.06
CDK2AP1-201ENST00000261692 LZTS2Q9BRK4 669 aa27.92■■■□□ 2.06
CDK2AP1-201ENST00000261692 CCL15-CCL14A0A0B4J2E2 113 aa27.91■■■□□ 2.06
CDK2AP1-201ENST00000261692 INHBEP58166 350 aa27.91■■■□□ 2.06
CDK2AP1-201ENST00000261692 CCT2P78371 535 aaKnown RBP27.91■■■□□ 2.06
CDK2AP1-201ENST00000261692 PABPC4Q13310 644 aaKnown RBP eCLIP27.91■■■□□ 2.062e-8■□□□□ 10.9
CDK2AP1-201ENST00000261692 BECN1Q14457 450 aa27.91■■■□□ 2.06
CDK2AP1-201ENST00000261692 CCL15Q16663 113 aa27.91■■■□□ 2.06
CDK2AP1-201ENST00000261692 CYP4F22Q6NT55 531 aa27.91■■■□□ 2.06
CDK2AP1-201ENST00000261692 CPLX2Q6PUV4 134 aaKnown RBP27.91■■■□□ 2.06
CDK2AP1-201ENST00000261692 KCTD1Q719H9 257 aa27.91■■■□□ 2.06
CDK2AP1-201ENST00000261692 RASGRP2Q7LDG7 609 aa27.91■■■□□ 2.06
CDK2AP1-201ENST00000261692 NUP88Q99567 741 aaPredicted RBP27.91■■■□□ 2.06
CDK2AP1-201ENST00000261692 RPAP3Q9H6T3 665 aaPredicted RBP27.91■■■□□ 2.06
CDK2AP1-201ENST00000261692 AGTPBP1Q9UPW5 1226 aa27.91■■■□□ 2.06
CDK2AP1-201ENST00000261692 FRMPD2Q68DX3 1309 aaPredicted RBP27.91■■■□□ 2.06
CDK2AP1-201ENST00000261692 PLA2G6O60733 806 aa27.9■■■□□ 2.06
CDK2AP1-201ENST00000261692 LARGE1O95461 756 aa27.9■■■□□ 2.06
CDK2AP1-201ENST00000261692 STAT2P52630 851 aa27.9■■■□□ 2.06
CDK2AP1-201ENST00000261692 SCRN1Q12765 414 aa27.9■■■□□ 2.06
CDK2AP1-201ENST00000261692 NOGQ13253 232 aa27.9■■■□□ 2.06
CDK2AP1-201ENST00000261692 FEM1BQ9UK73 627 aa27.9■■■□□ 2.06
CDK2AP1-201ENST00000261692 TESPA1A2RU30 521 aaPredicted RBP27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 USP17L15C9J2P7 530 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 USP17L13C9JLJ4 530 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 USP17L11C9JVI0 530 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 KLRF2D3W0D1 207 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 USP17L18D6R9N7 530 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 USP17L22D6RA61 530 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 USP17L17D6RBQ6 530 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 USP17L19D6RCP7 530 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 USP17L20D6RJB6 530 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 CPLX1O14810 134 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 GOLGA8HP0CJ92 632 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 USP17L24Q0WX57 530 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 FAM160B2Q86V87 743 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 CHURC1Q8WUH1 139 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 TANGO6Q9C0B7 1094 aa27.89■■■□□ 2.06
CDK2AP1-201ENST00000261692 PTPRFP10586 1907 aa27.89■■■□□ 2.05
CDK2AP1-201ENST00000261692 TMEM232C9JQI7 657 aa27.89■■■□□ 2.05
CDK2AP1-201ENST00000261692 HOXA7P31268 230 aaPredicted RBP27.89■■■□□ 2.05
CDK2AP1-201ENST00000261692 SREBF2Q12772 1141 aa27.89■■■□□ 2.05
CDK2AP1-201ENST00000261692 IKQ13123 557 aaPredicted RBP27.89■■■□□ 2.05
CDK2AP1-201ENST00000261692 MOGSQ13724 837 aa27.89■■■□□ 2.05
CDK2AP1-201ENST00000261692 STAG2Q8N3U4 1231 aa27.89■■■□□ 2.05
CDK2AP1-201ENST00000261692 CAPNS2Q96L46 248 aa27.89■■■□□ 2.05
CDK2AP1-201ENST00000261692 GPCPD1Q9NPB8 672 aa27.89■■■□□ 2.05
CDK2AP1-201ENST00000261692 HSPA6P17066 643 aa27.88■■■□□ 2.05
CDK2AP1-201ENST00000261692 SMARCA1P28370 1054 aa27.88■■■□□ 2.05
CDK2AP1-201ENST00000261692 CDC27P30260 824 aa27.88■■■□□ 2.05
CDK2AP1-201ENST00000261692 ADD1P35611 737 aaKnown RBP27.88■■■□□ 2.05
CDK2AP1-201ENST00000261692 TMTC3Q6ZXV5 915 aa27.88■■■□□ 2.05
CDK2AP1-201ENST00000261692 BRI3BPQ8WY22 251 aa27.88■■■□□ 2.05
CDK2AP1-201ENST00000261692 NCOA5Q9HCD5 579 aaKnown RBP27.88■■■□□ 2.05
CDK2AP1-201ENST00000261692 FAM217BQ9NTX9 383 aaPredicted RBP27.88■■■□□ 2.05
CDK2AP1-201ENST00000261692 SLC45A1Q9Y2W3 748 aa27.88■■■□□ 2.05
CDK2AP1-201ENST00000261692 LOC285556D6RIA3 1793 aa27.87■■■□□ 2.05
CDK2AP1-201ENST00000261692 CDKL5O76039 1030 aa27.87■■■□□ 2.05
CDK2AP1-201ENST00000261692 GRM1Q13255 1194 aa27.87■■■□□ 2.05
CDK2AP1-201ENST00000261692 TREML2Q5T2D2 321 aa27.87■■■□□ 2.05
CDK2AP1-201ENST00000261692 BTNL9Q6UXG8 535 aa27.87■■■□□ 2.05
CDK2AP1-201ENST00000261692 CATSPERGQ6ZRH7 1159 aa27.87■■■□□ 2.05
CDK2AP1-201ENST00000261692 NECAB1Q8N987 351 aa27.87■■■□□ 2.05
CDK2AP1-201ENST00000261692 ANKRD23Q86SG2 305 aa27.86■■■□□ 2.05
CDK2AP1-201ENST00000261692 REM2Q8IYK8 340 aaPredicted RBP27.86■■■□□ 2.05
CDK2AP1-201ENST00000261692 FLOT1O75955 427 aa27.85■■■□□ 2.05
CDK2AP1-201ENST00000261692 GPAT2Q6NUI2 795 aa27.85■■■□□ 2.05
CDK2AP1-201ENST00000261692 CCDC83Q8IWF9 413 aa27.85■■■□□ 2.05
CDK2AP1-201ENST00000261692 SPZ1Q9BXG8 430 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms