RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 NOD2Q9HC29 1040 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 CUTAO60888 179 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 MSH2P43246 934 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 PTPN21Q16825 1174 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 PLA2G4DQ86XP0 818 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 SCYL3Q8IZE3 742 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 C17orf50Q8WW18 174 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 MAIP1Q8WWC4 291 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 MMADHCQ9H3L0 296 aaPredicted RBP11.76□□□□□ -0.53
KPNA3-201ENST00000261667 Q9H521 79 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 STOML1Q9UBI4 398 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 CHD2O14647 1828 aaKnown RBP11.76□□□□□ -0.53
KPNA3-201ENST00000261667 GMNCA6NCL1 334 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 GFAPP14136 432 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 RPS6KA3P51812 740 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 SFSWAPQ12872 951 aaKnown RBP11.76□□□□□ -0.53
KPNA3-201ENST00000261667 MYSM1Q5VVJ2 828 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 ANKRD44Q8N8A2 993 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 RIN2Q8WYP3 895 aaPredicted RBP11.76□□□□□ -0.53
KPNA3-201ENST00000261667 KDM4CQ9H3R0 1056 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 AKAP2Q9Y2D5 859 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 TMA7Q9Y2S6 64 aaKnown RBP11.76□□□□□ -0.53
KPNA3-201ENST00000261667 CDC42BPGQ6DT37 1551 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 FAM200BP0CF97 657 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 PAX3P23760 479 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 VSNL1P62760 191 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 CFAP73A6NFT4 308 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 ZNF202O95125 648 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 PDHBP11177 359 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 SERPINB3P29508 390 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 DMPKQ09013 629 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 PRR16Q569H4 304 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 SPATA21Q7Z572 469 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 CCDC13Q8IYE1 715 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 P3H4Q92791 437 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 ELAC2Q9BQ52 826 aaKnown RBP11.75□□□□□ -0.53
KPNA3-201ENST00000261667 FUT8Q9BYC5 575 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 MIS18AQ9NYP9 233 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 KRT75O95678 551 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 WDR78Q5VTH9 848 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 PROCA1Q8NCQ7 364 aaPredicted RBP11.75□□□□□ -0.53
KPNA3-201ENST00000261667 CASP10Q92851 521 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 SIKE1Q9BRV8 207 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 NUF2Q9BZD4 464 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 SYNCQ9H7C4 482 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 TRIM35Q9UPQ4 493 aa11.75□□□□□ -0.53
KPNA3-201ENST00000261667 UTP11Q9Y3A2 253 aaKnown RBP11.75□□□□□ -0.53
KPNA3-201ENST00000261667 ITSN1Q15811 1721 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 LRRIQ3A6PVS8 624 aaPredicted RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 ANP32DO95626 131 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 MX2P20592 715 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 GUCY1A3Q02108 690 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 TRIM14Q14142 442 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 PREPLQ4J6C6 727 aaPredicted RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 NUTM2GQ5VZR2 741 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 DENND2CQ68D51 928 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 ATP6V0A1Q93050 837 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 OPTNQ96CV9 577 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 GPR101Q96P66 508 aaPredicted RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 OLFM3Q96PB7 478 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 NR1H4Q96RI1 486 aaPredicted RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 CALCOCO2Q13137 446 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 ATL3Q6DD88 541 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 ZNF483Q8TF39 744 aaPredicted RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 EZH1Q92800 747 aaPredicted RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 IWS1Q96ST2 819 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 HAUS4Q9H6D7 363 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 ATP7BP35670 1465 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 HMGB1P1B2RPK0 211 aaPredicted RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 H3BQF6 201 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 IRF6O14896 467 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 CETN2P41208 172 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 ARID5AQ03989 594 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 CCDC82Q8N4S0 544 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 ZNF473Q8WTR7 871 aaKnown RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 COG1Q8WTW3 980 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 CCT8L2Q96SF2 557 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 CDC5LQ99459 802 aaKnown RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 ZNF446Q9NWS9 450 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 ARIH1Q9Y4X5 557 aaPredicted RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 DDX58O95786 925 aaKnown RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 IRX4P78413 519 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 GSPT2Q8IYD1 628 aaKnown RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 TRMT44Q8IYL2 757 aaKnown RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 KIAA2013Q8IYS2 634 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 LRRC8CQ8TDW0 803 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 SREK1Q8WXA9 508 aaKnown RBP11.74□□□□□ -0.53
KPNA3-201ENST00000261667 CLMNQ96JQ2 1002 aa11.74□□□□□ -0.53
KPNA3-201ENST00000261667 COL3A1P02461 1466 aaPredicted RBP11.73□□□□□ -0.53
KPNA3-201ENST00000261667 ACTN4O43707 911 aaKnown RBP11.73□□□□□ -0.53
KPNA3-201ENST00000261667 PPP1R37O75864 691 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 ICA1Q05084 483 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 RCN2Q14257 317 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 PSMD6Q15008 389 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 CCDC93Q567U6 631 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 PRPF31Q8WWY3 499 aaKnown RBP11.73□□□□□ -0.53
KPNA3-201ENST00000261667 STAMBPL1Q96FJ0 436 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 TXLNGQ9NUQ3 528 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 HMG20BQ9P0W2 317 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms