RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 JMYQ8N9B5 988 aa20.31■□□□□ 0.84
SSB-201ENST00000260956 ERCC4Q92889 916 aaPredicted RBP20.31■□□□□ 0.84
SSB-201ENST00000260956 FBXO2Q9UK22 296 aaPredicted RBP20.31■□□□□ 0.84
SSB-201ENST00000260956 HDAC9Q9UKV0 1011 aa20.31■□□□□ 0.84
SSB-201ENST00000260956 FSTL1Q12841 308 aa20.3■□□□□ 0.84
SSB-201ENST00000260956 MTMR14Q8NCE2 650 aa20.3■□□□□ 0.84
SSB-201ENST00000260956 BPIFA3Q9BQP9 254 aa20.3■□□□□ 0.84
SSB-201ENST00000260956 TTC12Q9H892 705 aaPredicted RBP20.3■□□□□ 0.84
SSB-201ENST00000260956 TUBE1Q9UJT0 475 aa20.3■□□□□ 0.84
SSB-201ENST00000260956 SERPINA10Q9UK55 444 aa20.3■□□□□ 0.84
SSB-201ENST00000260956 GAKO14976 1311 aa20.3■□□□□ 0.84
SSB-201ENST00000260956 PTPREP23469 700 aa20.3■□□□□ 0.84
SSB-201ENST00000260956 GSTO1P78417 241 aa20.3■□□□□ 0.84
SSB-201ENST00000260956 DLGAP5Q15398 846 aa20.3■□□□□ 0.84
SSB-201ENST00000260956 RILPL1Q5EBL4 403 aa20.3■□□□□ 0.84
SSB-201ENST00000260956 CLIC6Q96NY7 704 aa20.3■□□□□ 0.84
SSB-201ENST00000260956 IL17RBQ9NRM6 502 aa20.3■□□□□ 0.84
SSB-201ENST00000260956 SUGT1Q9Y2Z0 365 aa20.3■□□□□ 0.84
SSB-201ENST00000260956 PASKQ96RG2 1323 aa20.29■□□□□ 0.84
SSB-201ENST00000260956 FAM47AQ5JRC9 791 aa20.29■□□□□ 0.84
SSB-201ENST00000260956 APOBEC3HQ6NTF7 200 aaKnown RBP20.29■□□□□ 0.84
SSB-201ENST00000260956 CCDC82Q8N4S0 544 aa20.29■□□□□ 0.84
SSB-201ENST00000260956 SRBD1Q8N5C6 995 aaKnown RBP20.29■□□□□ 0.84
SSB-201ENST00000260956 PIBF1Q8WXW3 757 aa20.29■□□□□ 0.84
SSB-201ENST00000260956 ZNF830Q96NB3 372 aaPredicted RBP20.29■□□□□ 0.84
SSB-201ENST00000260956 GPR75-ASB3A0A0A6YYF3 556 aa20.28■□□□□ 0.84
SSB-201ENST00000260956 ADM5C9JUS6 153 aa20.28■□□□□ 0.84
SSB-201ENST00000260956 RBM5P52756 815 aaKnown RBP eCLIP20.28■□□□□ 0.84
SSB-201ENST00000260956 SAFBQ15424 915 aaKnown RBP eCLIP20.28■□□□□ 0.84
SSB-201ENST00000260956 DPCR1Q3MIW9 517 aa20.28■□□□□ 0.84
SSB-201ENST00000260956 ELOA2Q8IYF1 753 aaPredicted RBP20.28■□□□□ 0.84
SSB-201ENST00000260956 FAM163AQ96GL9 167 aaPredicted RBP20.28■□□□□ 0.84
SSB-201ENST00000260956 SPTLC3Q9NUV7 552 aa20.28■□□□□ 0.84
SSB-201ENST00000260956 MCM9Q9NXL9 1143 aa20.28■□□□□ 0.84
SSB-201ENST00000260956 MYH1P12882 1939 aa20.28■□□□□ 0.84
SSB-201ENST00000260956 POLR2AP24928 1970 aaKnown RBP20.27■□□□□ 0.84
SSB-201ENST00000260956 CLRN2A0PK11 232 aa20.27■□□□□ 0.84
SSB-201ENST00000260956 FAM205CA6NFA0 338 aa20.27■□□□□ 0.84
SSB-201ENST00000260956 SLC3A2P08195 630 aaKnown RBP20.27■□□□□ 0.84
SSB-201ENST00000260956 MMP14P50281 582 aa20.27■□□□□ 0.84
SSB-201ENST00000260956 GRIN1Q05586 938 aa20.27■□□□□ 0.84
SSB-201ENST00000260956 PDE4BQ07343 736 aa20.27■□□□□ 0.84
SSB-201ENST00000260956 GNL2Q13823 731 aaKnown RBP20.27■□□□□ 0.84
SSB-201ENST00000260956 EARS2Q5JPH6 523 aaKnown RBP20.27■□□□□ 0.84
SSB-201ENST00000260956 CEP57L1Q8IYX8 460 aa20.27■□□□□ 0.84
SSB-201ENST00000260956 SDF4Q9BRK5 362 aa20.27■□□□□ 0.84
SSB-201ENST00000260956 TDRD3Q9H7E2 651 aaKnown RBP20.27■□□□□ 0.84
SSB-201ENST00000260956 VPS54Q9P1Q0 977 aa20.27■□□□□ 0.84
SSB-201ENST00000260956 PCDHB6Q9Y5E3 794 aa20.27■□□□□ 0.84
SSB-201ENST00000260956 SYKP43405 635 aa20.27■□□□□ 0.83
SSB-201ENST00000260956 HTRA3P83110 453 aa20.27■□□□□ 0.83
SSB-201ENST00000260956 HDLBPQ00341 1268 aaKnown RBP20.27■□□□□ 0.83
SSB-201ENST00000260956 PRAMEF18Q5VWM3 479 aa20.27■□□□□ 0.83
SSB-201ENST00000260956 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.27■□□□□ 0.83
SSB-201ENST00000260956 KRI1Q8N9T8 703 aaKnown RBP20.27■□□□□ 0.83
SSB-201ENST00000260956 TEKT1Q969V4 418 aa20.27■□□□□ 0.83
SSB-201ENST00000260956 ZDHHC15Q96MV8 337 aa20.27■□□□□ 0.83
SSB-201ENST00000260956 MRIQ9BWK5 157 aa20.27■□□□□ 0.83
SSB-201ENST00000260956 TCP11L1Q9NUJ3 509 aa20.27■□□□□ 0.83
SSB-201ENST00000260956 DAGLAQ9Y4D2 1042 aa20.27■□□□□ 0.83
SSB-201ENST00000260956 TPM3P06753 285 aa20.26■□□□□ 0.83
SSB-201ENST00000260956 RHBDL3P58872 404 aa20.26■□□□□ 0.83
SSB-201ENST00000260956 NLRP12P59046 1061 aa20.26■□□□□ 0.83
SSB-201ENST00000260956 KRT26Q7Z3Y9 468 aa20.26■□□□□ 0.83
SSB-201ENST00000260956 METTL16Q86W50 562 aaKnown RBP20.26■□□□□ 0.83
SSB-201ENST00000260956 CERS3Q8IU89 383 aa20.26■□□□□ 0.83
SSB-201ENST00000260956 ZNF579Q8NAF0 562 aaKnown RBP20.26■□□□□ 0.83
SSB-201ENST00000260956 DYNLL2Q96FJ2 89 aa20.26■□□□□ 0.83
SSB-201ENST00000260956 MRFAP1L1Q96HT8 127 aa20.26■□□□□ 0.83
SSB-201ENST00000260956 LDHCP07864 332 aa20.25■□□□□ 0.83
SSB-201ENST00000260956 CACNB3P54284 484 aa20.25■□□□□ 0.83
SSB-201ENST00000260956 PLCB2Q00722 1185 aa20.25■□□□□ 0.83
SSB-201ENST00000260956 NCAPHQ15003 741 aa20.25■□□□□ 0.83
SSB-201ENST00000260956 SLC35G1Q2M3R5 365 aa20.25■□□□□ 0.83
SSB-201ENST00000260956 CST9Q5W186 159 aa20.25■□□□□ 0.83
SSB-201ENST00000260956 HHIPL2Q6UWX4 724 aa20.25■□□□□ 0.83
SSB-201ENST00000260956 DGKHQ86XP1 1220 aa20.25■□□□□ 0.83
SSB-201ENST00000260956 V9GY48 417 aaPredicted RBP20.25■□□□□ 0.83
SSB-201ENST00000260956 WNT7AO00755 349 aa20.24■□□□□ 0.83
SSB-201ENST00000260956 MDM2Q00987 491 aaPredicted RBP20.24■□□□□ 0.83
SSB-201ENST00000260956 KIAA1524Q8TCG1 905 aa20.24■□□□□ 0.83
SSB-201ENST00000260956 DCPSQ96C86 337 aaKnown RBP20.24■□□□□ 0.83
SSB-201ENST00000260956 PYCARDQ9ULZ3 195 aa20.24■□□□□ 0.83
SSB-201ENST00000260956 SRPRBQ9Y5M8 271 aaKnown RBP20.24■□□□□ 0.83
SSB-201ENST00000260956 hCG_1642624A0A1W2PR95 340 aa20.24■□□□□ 0.83
SSB-201ENST00000260956 BAG3O95817 575 aa20.24■□□□□ 0.83
SSB-201ENST00000260956 RASA1P20936 1047 aa20.24■□□□□ 0.83
SSB-201ENST00000260956 KRBA2Q6ZNG9 492 aa20.24■□□□□ 0.83
SSB-201ENST00000260956 AOPEPQ8N6M6 819 aa20.24■□□□□ 0.83
SSB-201ENST00000260956 SPC24Q8NBT2 197 aa20.24■□□□□ 0.83
SSB-201ENST00000260956 ZNF70Q9UC06 446 aaPredicted RBP20.24■□□□□ 0.83
SSB-201ENST00000260956 KCNH3Q9ULD8 1083 aa20.24■□□□□ 0.83
SSB-201ENST00000260956 PTGS1P23219 599 aa20.23■□□□□ 0.83
SSB-201ENST00000260956 KRT2P35908 639 aa20.23■□□□□ 0.83
SSB-201ENST00000260956 BTDP43251 543 aa20.23■□□□□ 0.83
SSB-201ENST00000260956 USP5P45974 858 aa20.23■□□□□ 0.83
SSB-201ENST00000260956 PLCD1P51178 756 aa20.23■□□□□ 0.83
SSB-201ENST00000260956 TERF1P54274 439 aa20.23■□□□□ 0.83
SSB-201ENST00000260956 TFAP4Q01664 338 aa20.23■□□□□ 0.83
SSB-201ENST00000260956 GRM4Q14833 912 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms